Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13627
- Subject:
- XM_006540666.1
- Aligned Length:
- 4066
- Identities:
- 2119
- Gaps:
- 1601
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGGCTGGAGGCCCAGAGGCTGCCTGGGGCTGAGGAGGCCCCCGTGAGGGTGGCCCTTCGAGTTCGCCCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTGCCCAAGGAGCTGCTGCATGGTCATCAGAGTTGCCTGCGTGTGGAGCCTGAGCGGGGTCGAATCACCCTGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCGGGACCGACACTTTGGGTTCCATGTGGTCCTGGGAGAGGACACTGGGCAAGAGGCTGTGTACCAGGCTTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGCAGCCCCTCCTCGAGGCTTTCTTTGAGGGCTTCAATGCCACCGTCTTTGCCTATGGTCAGACAGGCTCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAGACATATACCATGGGGGAGGCCAGTGTGGCCTCCCTGCATGAAGATGAACAAGGTATCATCCCAAGGGCCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGCTGAGGCCTTCAAGCTCATTGATGAGAATGACCTGCTGGACTGCCTGGTGCATGTATCCTACCTGGAACTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAGGAAGAGTTCCGAGATCTGCTAGAAGTTGGCACTGCCAGCCGGGACATCCAGCTTCGGGAAGATGATCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGAAATGTTGTGCTCTGTGGGGTGAAAGAAGTGGATGTAGAAGGCCTGGACGAGGTGCTGAGCCTCCTAGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGGGCAATGCTGCGCGCCACACAGGCGCCACACACTTCAACCGCCTCTCCAGCCGCTCACACACAGTCTTCACT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGACCCTGGAGCAGCGGGGACGGACTCCTAGCCGCTTGCCTCGACCCGCCGCTGGCCACCTGCTGGTCTCCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATTCCACTTCGTGGACCTGGCAGGCTCCGAGAGGGTTCTGAAGACCGGCAGCACCGGAGAACGGCTCAAAGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCATCCAGATTAACAGCACCCTGCTGGCGCTGGGAAATGTCATTAGCGCCCTGGGGGACCCCCAGCGCCGAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCACATCCCTTACCGTGATTCCAAGATCACCCGGATCCTCAAAGACTCTCTGGGAGGGAATGCCAAGACAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GATGATCGCCTGCGTCAGCCCCTCCTCCTCCGACTTCGATGAGACCCTCAACACCCTAAACTACGCCAGCCGTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCAGAACATCCGCAATCGCGCCACAGTCAACTGGCGTCCAGAGGCCGAGCGCGTCCCTGAGGAACAGGCGGCG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGTGCGCGCGGGCCGCCGCGACACCGCTCGGAAACGCGCATCATCCATCGCGGCCGGCGCGTGCCCTGCCCTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTGGGCTCCGCGGCAGTCGCTGCGGGCCTGGGGGCCGAGTGCGCGCGCTGCCGGGCCCGCACCAGCGCCGCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACAGCCTCCTGCGAGAGCTTCAGGCCGAGCCCGGGCTGCCTGGCGCTGCCGCCCGCAAAGTGCGGGACTGGCTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCGCGGTGGAGGGCGAGCGCAGCACCTTGAGCTCTGCCTCCGGACCCGACAGCGGCATCGAAAGCGCTCCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGAGGACCAGGCGGCACAGGGGACCAGCGGGAGAAAGGGAGATGAGGGGACCCAGCAGCTGTTGACCCTGCAGA 1480
Query 1 -----------------------------------------------------------ATGGAGCAGTACAAA 15
|||||||||||||||
Sbjct 1481 GCCAGGTGGCCCGGCTAGAGGAGGAGAATCGAGATTTCCTGGCGGCTTTGGAGGACGCCATGGAGCAGTACAAA 1554
Query 16 CTGCAGAGCGACCGGCTGCGTGAGCAGCAGGAGGAGATGGTGGAACTGCGGCTGCGGTTAGAGCTGGTGCGGCC 89
||||||||.|||||.|||||.|||||||||||.||||||||.|||||||||||.||..|||||||||..|.|||
Sbjct 1555 CTGCAGAGTGACCGCCTGCGGGAGCAGCAGGAAGAGATGGTAGAACTGCGGCTACGCCTAGAGCTGGCACAGCC 1628
Query 90 AGGCTGGGGGGGCCCGCGGCTCCTGAATGGCCTGCCTCCCGGGTCCTTTGTGCCTCGACCTCATACAGCCCCCC 163
.||||||||.|..|||.||||||||.|.|||.||||.||.||.|||||||||||.||.|||||.||||||||||
Sbjct 1629 TGGCTGGGGTGCACCGGGGCTCCTGCAGGGCTTGCCACCGGGATCCTTTGTGCCCCGGCCTCACACAGCCCCCC 1702
Query 164 TGGGGGGTGCCCACGCCCATGTGCTGGGCATGGTGCCGCCTGCCTGCCTCCCTGGAGATGAAGTTGGCTCTGAG 237
||||||||||||||.|.||..|||||||||||.||||..|..|.||.||.||||||||.||||||.||||||||
Sbjct 1703 TGGGGGGTGCCCACACTCACATGCTGGGCATGATGCCCTCGACATGTCTTCCTGGAGAAGAAGTTAGCTCTGAG 1776
Query 238 CAGAGGGGAGAGCAGGTGACAAATGGCAGGGAGGCTGGAGCTGAGTTGCTGACTGAGGTGAACAGGCTGGGAAG 311
||| |.||.||| |||||.|||.|....|||.|||.||.||.|..|||.|.|||...||.|.||
Sbjct 1777 CAG-GTGGTGAG-----------TGGCAAGGAAGTCAAAGCAGAGGTGTTGGCCCAGGCGGACAAATTGAGGAG 1838
Query 312 TGGCTCTTCAGCTGCTTCAGAGGAGGAAGAGGAGGAG------------------------GAGGAGCCGCCCA 361
||.||||||..||.|.|||||||||||||.||||||| ||||||||.||||
Sbjct 1839 TGCCTCTTCCACTACATCAGAGGAGGAAGGGGAGGAGGAGGAGGAAGAGGAGGAAGAAGAAGAGGAGCCACCCA 1912
Query 362 GGCGGACCTTACACCTGCGCAGAAATAGGATCAGCAACTGCAGTCAGAGGGCGGGGGCACGCCCAGGGAGTCTG 435
|||||||||||.||.|||||||||||.|||||||||||||.|||||||||||.|||....|.||||||||.|..
Sbjct 1913 GGCGGACCTTATACTTGCGCAGAAATGGGATCAGCAACTGGAGTCAGAGGGCAGGGTTGAGTCCAGGGAGCCCA 1986
Query 436 CCAGAGAGGAAGGGCCCAGAGCTTTGCCTTGAGGAGTTGGATGCAGCCATTCCAGGGTCCA----GAGCAGTTG 505
||.||.|||||||||||||||.|.||||..||.|||...|.|||.|||||.|||| || .||||||.|
Sbjct 1987 CCTGACAGGAAGGGCCCAGAGGTCTGCCCAGAAGAGCCAGCTGCTGCCATCCCAG----CACCACAAGCAGTCG 2056
Query 506 GTGGGAGCAAGGCCCGAGTTCAGGCCCGCCAGGTCCCCCCTGCCACAGCCTCAGAGTGGCGGCTGGCCCAGGCC 579
||.|..||||||.||.|||||||.|||||||||.|||..||||||..|||||.||||||||.||||||||||||
Sbjct 2057 GTAGCGGCAAGGTCCCAGTTCAGACCCGCCAGGCCCCAGCTGCCATGGCCTCTGAGTGGCGACTGGCCCAGGCC 2130
Query 580 CAGCAGAAGATCCGGGAGCTGGCTATCAACATCCGCATGAAGGAGGAGCTTATTGGCGAGCTGGTCCGCACAGG 653
||.|||||.||||||||.|||||.||||||||||||||||||||||||||.|||||.|||||||||||.|||||
Sbjct 2131 CAACAGAAAATCCGGGAACTGGCCATCAACATCCGCATGAAGGAGGAGCTCATTGGTGAGCTGGTCCGGACAGG 2204
Query 654 AAAGGCAGCTCAGGCCCTGAACCGCCAGCACAGCCAGCGTATCCGGGAGCTGGAGCAGGAGGCAGAGCAGGTGC 727
.|||||.||.||||||||||||||.||.|||||||||||.|||||||||||||||||||||||.||||..||||
Sbjct 2205 GAAGGCGGCCCAGGCCCTGAACCGTCAACACAGCCAGCGCATCCGGGAGCTGGAGCAGGAGGCTGAGCGTGTGC 2278
Query 728 GGGCCGAGCTGAGTGAAGGCCAGAGGCAGCTGCGGGAGCTCGAGGGCAAGGAGCTCCAGGATGCTGGCGAGCGG 801
||||.||||||.|||||||.|||||||||||.||.|||||.|||||||.|||||.|||.|||||..|||||.||
Sbjct 2279 GGGCGGAGCTGTGTGAAGGGCAGAGGCAGCTTCGAGAGCTGGAGGGCAGGGAGCCCCAAGATGCCAGCGAGAGG 2352
Query 802 TCTCGGCTCCAGGAGTTCCGCAGGAGGGTCGCTGCGGCCCAGAGCCAGGTGCAGGTGCTGAAGGAGAAGAAGCA 875
||..||||||||||.|||||.|.|||.||.|||||.|||||.||||||||||||||||||||||||||||||||
Sbjct 2353 TCCAGGCTCCAGGAATTCCGTAAGAGAGTGGCTGCAGCCCAAAGCCAGGTGCAGGTGCTGAAGGAGAAGAAGCA 2426
Query 876 GGCTACGGAGCGGCTGGTGTCACTGTCGGCCCAGAGTGAGAAGCGACTGCAGGAGCTCGAGCGGAACGTGCAGC 949
|||.||.|||||.|||||||||||||||||.||.|||||||..||.||.||||||||.|||.||||.|||||||
Sbjct 2427 GGCAACAGAGCGACTGGTGTCACTGTCGGCTCAAAGTGAGACTCGGCTACAGGAGCTGGAGAGGAATGTGCAGC 2500
Query 950 TCATGCGGCAGCAGCAGGGACAGCTGCAGAGGCGGCTTCGCGAGGAGACGGAGCAGAAGCGGCGCCTGGAGGCA 1023
|||||||||..||||||||.|||||||||||||||||.||.||||||||.|||||||||||||||||.|||.|.
Sbjct 2501 TCATGCGGCGACAGCAGGGGCAGCTGCAGAGGCGGCTCCGTGAGGAGACAGAGCAGAAGCGGCGCCTAGAGACG 2574
Query 1024 GAAATGAGCAAGCGGCAGCACCGCGTCAAGGAGCTGGAGCTGAAGCATGAGCAACAGCAGAAGATCCTGAAGAT 1097
||.||||.||||||||||||.|||||||||||||||||.||||||||.|||||||||||.|||||||||||.||
Sbjct 2575 GAGATGAACAAGCGGCAGCATCGCGTCAAGGAGCTGGAACTGAAGCACGAGCAACAGCAAAAGATCCTGAAAAT 2648
Query 1098 TAAGACGGAAGAGATCGCGGCCTTCCAGAGGAAGAGGCGCAGTGGCAGCAACGGCTCTGTGGTCAGCCTGGAAC 1171
.|||||.||||||||.||.||||||||||||||||||||||||||||||||.|||||||||||.||||||||.|
Sbjct 2649 CAAGACAGAAGAGATTGCAGCCTTCCAGAGGAAGAGGCGCAGTGGCAGCAATGGCTCTGTGGTGAGCCTGGAGC 2722
Query 1172 AGCAGCAGAAGATTGAGGAGCAGAAGAAGTGGCTGGACCAGGAGATGGAGAAGGTGCTACAGCAGCGGCGGGCG 1245
|||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||.|||||||||||||||
Sbjct 2723 AGCAGCAGAAGATCGAGGAGCAGAAGAAGTGGCTGGACCAGGAGATGGAAAAGGTGCTGCAGCAGCGGCGGGCG 2796
Query 1246 CTGGAGGAGCTGGGGGAGGAGCTCCACAAGCGGGAGGCCATCCTGGCCAAGAAGGAGGCCCTGATGCAGGAGAA 1319
|||||||||.||||.||||||||.|.|||||||||||.||||||||||||||||||||||||||||||||||||
Sbjct 2797 CTGGAGGAGTTGGGAGAGGAGCTTCGCAAGCGGGAGGTCATCCTGGCCAAGAAGGAGGCCCTGATGCAGGAGAA 2870
Query 1320 GACGGGGCTGGAGATCAAGCGCCTGAGATCCAGCCAGGCCCTCAACGAGGACATCGTGCGAGTGTCCAGCCGGC 1393
|||||||||.||||.||||||||||||.||||||||||||||.||.||.|||||.|||||.|||||||||||.|
Sbjct 2871 GACGGGGCTTGAGAGCAAGCGCCTGAGGTCCAGCCAGGCCCTAAATGAAGACATTGTGCGTGTGTCCAGCCGCC 2944
Query 1394 TGGAGCACCTGGAGAAGGAGCTGTCCGAGAAGAGCGGGCAGCTGCGGCAGGGCAGCGCCCAGAGCCAGCAGCAG 1467
|.||.|||||||||||||||||.||.||||||||.||||||||||||||.|||||||||||||.||||||||||
Sbjct 2945 TAGAACACCTGGAGAAGGAGCTATCTGAGAAGAGTGGGCAGCTGCGGCAAGGCAGCGCCCAGAACCAGCAGCAG 3018
Query 1468 ATCCGCAGGGAGATCGACAGCCTGCGCCAGGAGAAGGACTCACTGCTCAAGCAGCGCCTGGAGATCGACGGCAA 1541
|||.|..|||||||.||||.|||||||||.|||||||||||||||.|.|||||.|||||||||||.||..||||
Sbjct 3019 ATCAGAGGGGAGATAGACACCCTGCGCCAAGAGAAGGACTCACTGTTGAAGCAACGCCTGGAGATTGATAGCAA 3092
Query 1542 GCTGAGGCAGGGGAGTCTGCTGTCCCCCGAGGAGGAGCGGACGCTGTTCCAGTTGGATGAGGCCATCGAGGCCC 1615
||||||||||||.||.||||||||.||.|||||.|||.||||.|||||||||.|||||||.|||||||||||||
Sbjct 3093 GCTGAGGCAGGGAAGCCTGCTGTCACCTGAGGAAGAGAGGACACTGTTCCAGCTGGATGAAGCCATCGAGGCCC 3166
Query 1616 TGGATGCTGCCATTGAGTATAAGAATGAGGCCATCACATGCCGCCAGCGGGTGCTTCGGGCCTCAGCCTCGTTG 1689
||||.||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||.||.|||||.|||
Sbjct 3167 TGGACGCTGCCATCGAGTACAAGAATGAGGCTATCACATGCCGCCAGCGGGTGCTACGGGCTTCGGCCTCCTTG 3240
Query 1690 CTGTCCCAGTGCGAGATGAACCTCATGGCCAAGCTCAGCTACCTCTCATCCTCAGAGACCAGAGCCCTCCTCTG 1763
|||||||||||.||||||||.||||||||.||||||||||||||.||.||||||||||||||||||||.||.||
Sbjct 3241 CTGTCCCAGTGTGAGATGAATCTCATGGCAAAGCTCAGCTACCTTTCCTCCTCAGAGACCAGAGCCCTGCTGTG 3314
Query 1764 CAAGTATTTTGACAAGGTGGTGACGCTCCGAGAGGAGCAGCACCAGCAGCAGATTGCCTTCTCGGAACTGGAGA 1837
||||||||||||||||||||||||.||||||||||||||.||||||||.|||||||||||||||||.|||||||
Sbjct 3315 CAAGTATTTTGACAAGGTGGTGACACTCCGAGAGGAGCAACACCAGCAACAGATTGCCTTCTCGGAGCTGGAGA 3388
Query 1838 TGCAGCTGGAGGAGCAGCAGAGGCTGGTGTACTGGCTGGAGGTGGCCCTGGAGCGGCAGCGCCTGGAGATGGAC 1911
||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3389 TGCAGCTGGAGGAGCAGCAGCGGCTGGTGTACTGGCTGGAGGTGGCCCTGGAGCGGCAGCGCCTGGAGATGGAC 3462
Query 1912 CGCCAGCTGACCCTGCAGCAGAAGGAGCACGAGCAGAACATGCAGCTGCTCCTGCAGCAGAGTCGAGACCACCT 1985
||.|||||||||||||||||||||||||||||||||||..|.|||||||||||.||||||.|.|||||||||||
Sbjct 3463 CGGCAGCTGACCCTGCAGCAGAAGGAGCACGAGCAGAATGTACAGCTGCTCCTCCAGCAGGGCCGAGACCACCT 3536
Query 1986 CGGTGAAGGGTTAGCAGACAGCAGGAGGCAGTATGAGGCCCGGATTCAAGCTCTGGAGAAGGAACTGGGCCGTT 2059
.||.||.||||||||||||||||.||||||||||||||||||||||||.|||||||||||||||||.||.||..
Sbjct 3537 TGGCGAGGGGTTAGCAGACAGCAAGAGGCAGTATGAGGCCCGGATTCACGCTCTGGAGAAGGAACTAGGTCGAC 3610
Query 2060 ACATGTGGATAAACCAGGAACTGAAACAGAAGCTCGGCGGTGTGAA-CGCTGTAGGCCACAGCAGGGGTGGGGA 2132
|||||||||||||||||||.|||||.|||||||||.|.|..| ||| |.|||.||||||.|||.|||||.|.||
Sbjct 3611 ACATGTGGATAAACCAGGAGCTGAAGCAGAAGCTCAGTGCAG-GAAGCACTGCAGGCCAGAGCCGGGGTTGTGA 3683
Query 2133 GAAGAGGAGCCTGTGCTCGGAGGGCAGACA--GGCTCCTGGAAATGAAGATGAGCTCCACCTGGCA---CCCGA 2201
||.|||.|||||.|||..|||...|||||| |.|| ||||||||||||||.||||||.|..||| ||.||
Sbjct 3684 GAGGAGAAGCCTCTGCCTGGAAAACAGACAATGCCT--TGGAAATGAAGATGGGCTCCATCCCGCAGCTCCTGA 3755
Query 2202 GCTTCTCTGGCTGTCCCCCCTCACT-GAGGGGGCCCCCCGCACCCGGGAGGAGACGCGGGACTTGGTCCACGCT 2274
.|.||||||||.||||.|||| .|| |||||||...||||.....||||.|||.|.||||||||||||||.||.
Sbjct 3756 ACCTCTCTGGCAGTCCTCCCT-TCTGGAGGGGGTGTCCCGTGTGTGGGATGAGTCCCGGGACTTGGTCCATGCC 3828
Query 2275 CCGTTACCCTTGACCTGGAAACGCTCGAGCCTGTGTGGTGAG-GAGCAGGGGTCCCCCGAGGA-ACTGAGGCAG 2346
||..|||||.||||.|||||||||||.|||.|||| .|| ||||||||.|||.|.||||| .|| |||...
Sbjct 3829 CCACTACCCCTGACATGGAAACGCTCAAGCTTGTG----CAGCGAGCAGGGCTCCTCTGAGGAGTCT-AGGGTC 3897
Query 2347 CGGGAGGCGGCTGAGCCCCTGGTGGGGCGGGTGCTTCCTGTGGGTGAGGCAGGCCTGCCCTGGAACTTTGGGCC 2420
||||||.|..||||.||||..||.|||||||||||.|||.|||||||.|..|||||..|||||||||||||.||
Sbjct 3898 CGGGAGACAACTGAACCCCCAGTAGGGCGGGTGCTACCTATGGGTGAAGTGGGCCTCTCCTGGAACTTTGGACC 3971
Query 2421 TTTGTCCAAGCCCCGGCGGGAACTGCGACGAGCCAGCCCGGGGATGATTGATGTCCGGAAAAACCCCCTG 2490
.|||.|||||||||||.||||||..|||.||.|||||||.||||||||.||.|||.|||||||||||.||
Sbjct 3972 CTTGCCCAAGCCCCGGTGGGAACCCCGAAGAACCAGCCCAGGGATGATCGACGTCAGGAAAAACCCCTTG 4041
