Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13630
- Subject:
- NM_001345949.1
- Aligned Length:
- 1425
- Identities:
- 643
- Gaps:
- 681
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCTGAGGGATCAGTGATGTTCAGTGATGTGTCCATAGACTTCTCTCAGGAGGAGTGGGACTGCCTGGACCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTTCAGAGGGACTTATACAGAGATGTGATGTTGGAGAACTACGGCAATCTGGTTTCAATGGGACTTTACACTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTAAGCCTCAAGTGATCTCCTTATTGGAACAAGGGAAAGAGCCCTGGATGGTTGGCAGAGAGCTTACAAGAGGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTGTGTTCAGATCTGGAATCGATGTGTGAAACCAAGTTATTATCTCTAAAGAAGGAAGTTTATGAAATAGAATT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ATGCCAGAGGGAGATAATGGGACTTACAAAGCATGGCCTTGAGTACTCCAGTTTTGGAGATGTTTTGGAATATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAAGCCACCTTGCAAAACAACTGGGATATCCAAATGGGCATTTTAGTCAAGAAATATTCACTCCTGAATACATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCACATTTATTCAACAGACATTCCTTACTCTCCATCAAATAATTAATAATGAAGACAGACCCTATGAATGTAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAATGTGGAAAGGCCTTTAGTCAGAACTCACAATTTATTCAACATCAGAGAATTCATATTGGTGAAAAATCTT 592
Query 1 ATGAA--TAAGGAGTATGGGAAGTCCTTTAGTCGTGGCTCACTCGTTACTCGACATCAGAGGATTCACACTGGT 72
||||| |||.||||.||||||.|.|||||||.||||.||||..||||||||.||||.||..|||||.|||||.
Sbjct 593 ATGAATGTAAAGAGTGTGGGAAATTCTTTAGTTGTGGTTCACATGTTACTCGGCATCTGAAAATTCATACTGGC 666
Query 73 AAAAAACCCTATGAATGTAAGGAATGTGGCAAGGCTTTTAGTTGTAGTTCATATTTTTCTCAACATCAGAGGAT 146
.|||||||||.||||||||||||||||||.|||||.||.||||||||.|||||..||||||||||||||||.||
Sbjct 667 GAAAAACCCTTTGAATGTAAGGAATGTGGAAAGGCCTTCAGTTGTAGCTCATACCTTTCTCAACATCAGAGAAT 740
Query 147 TCACACTGGTGAGAAACCCTATGAATGTAAGGAATGTGGAAAAGCCTTTAAGTATTGCTCAAACCTTAATGATC 220
.||.||.|||.||||||||||||||||||||||||||||.||.|||||||..|||||||||||.||||.|||.|
Sbjct 741 CCATACCGGTAAGAAACCCTATGAATGTAAGGAATGTGGGAAGGCCTTTAGTTATTGCTCAAATCTTATTGACC 814
Query 221 ATCAGAGAATTCACACTGGTGAGAAACCCTATGAATGTAAAGTATGTGGAAAAGCCTTTACTAAAAGTTCACAA 294
|||||.||||||||||||||||.|||||.||||||||||||||||||||.||||||||||||||.||.||||||
Sbjct 815 ATCAGCGAATTCACACTGGTGAAAAACCTTATGAATGTAAAGTATGTGGGAAAGCCTTTACTAAGAGCTCACAA 888
Query 295 CTTTTTCTACATCTGAGAATTCATACTGGTGAGAAACCTTATGAATGTAAAGAATGTGGGAAAGCCTTTACTCA 368
|||||||..|||....||||||||||.|||||||||||.|||||||||||.||||||||.|||||||||||.||
Sbjct 889 CTTTTTCAGCATGCACGAATTCATACAGGTGAGAAACCCTATGAATGTAAGGAATGTGGCAAAGCCTTTACCCA 962
Query 369 ACACTCAAGGCTTATTCAGCATCAGAGAATGCATACTGGTGAGAAACCTTATGAATGTAAGCAGTGTGGGAAGG 442
...|||||.||||.||||.|||||||||||.|||||||||||||||||.|||||.||.|||.|.|||||.||.|
Sbjct 963 GAGCTCAAAGCTTGTTCAACATCAGAGAATTCATACTGGTGAGAAACCCTATGAGTGCAAGGAATGTGGCAAAG 1036
Query 443 CCTTTAATAGTGCCTCAACACTTACTAACCATCACAGAATTCATGCTGGTGAGAAGCTCTATGAATGTGAAGAA 516
||||||.|||||.||||.||||||||||.|||||.||||||||..||||||||||.|.||||||.|||.|.|||
Sbjct 1037 CCTTTAGTAGTGGCTCAGCACTTACTAATCATCAGAGAATTCACACTGGTGAGAAACCCTATGATTGTAAGGAA 1110
Query 517 TGTAGA-------------------------------------------------------------------- 522
|||.||
Sbjct 1111 TGTGGAAAGGCTTTTACTCAGAGCTCACAGCTTCGTCAACATCAGAGAATTCACGCTGGTGAGAAACCCTTTGA 1184
Query 523 ----------------AAGGCCTTTATTCAGAGCTCAGAACTTATTCAACATCAGAGAATCCATACAGATGAAA 580
||||||||||.|||||.||||.|||||.|.||.|||||||||||.|||||||||||||
Sbjct 1185 ATGTCTTGAATGTGGGAAGGCCTTTACTCAGAACTCACAACTTTTCCAGCATCAGAGAATTCATACAGATGAAA 1258
Query 581 AACCATATGAATGTAATGAATGTGGGAAGGCCTTTAATAAAGGCTCAAATCTTACTCGACATCAGAGAATTCAC 654
|||||||||||||||||||||||||.|||||||||||||||.|||||||.|||||||||||||.||||||||||
Sbjct 1259 AACCATATGAATGTAATGAATGTGGAAAGGCCTTTAATAAATGCTCAAACCTTACTCGACATCTGAGAATTCAC 1332
Query 655 ACTGGTGAGAAACCCTATGACTGTAAGGAATGTGGAAAGGCTTTTGGTAGTCGCTCTGACCTCATTCGCCATGA 728
||||||||.||.||||||.||||||||||||||||.|||||||||.|||||.||||.||.||||||||.|||.|
Sbjct 1333 ACTGGTGAAAAGCCCTATAACTGTAAGGAATGTGGGAAGGCTTTTAGTAGTGGCTCGGATCTCATTCGTCATCA 1406
Query 729 GGGAATTCATACTGGT--- 744
|||||||||||||..|
Sbjct 1407 GGGAATTCATACTAATAAA 1425