Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13694
• Subject: NM_001144978.2
• Aligned Length: 1053
• Identities: 420
• Gaps: 627

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGACGGTGCCGGTCCGCGGCTTCTCGCTGCTCCGCGGCCGCCTTGGCCGAGCGCCGGCGTTGGGCAGAAGCAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGCACCCTCCGTAAGGGCACCGGGAGAGCCCGGGAGTGCGTTCCGGGGCTTTCGGAGCAGCGGTGTGAGACATG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAGCCATTATTATATCAGGAACCGAAATGGCCAAGCATATCCAGAAAGAAATACAGCGAGGTGTGGAATCATGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTTCCCTTGGAAACAGAAGACCTCACCTCAGTATAATTTTAGTGGGAGATAACCCAGCAAGCCATACATATGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGAATAAGATAAGAGCTGCCTCTGCTGTAGGTATTTGTAGTGAGCTCATTCTAAAACCTAAGGATGTTTCTC  370

Query    1  -----------------------------------ATGGACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCA  39
                                               |||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAGAACTTTTGGACGTAACTGATCAATTGAATATGGACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCA  444

Query   40  CTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATAT  113
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTACCAGACCACGTTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATAT  518

Query  114  TATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAA  187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TATCAATATTGGAAGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAA  592

Query  188  TAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCT  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TAAAAAGAACAGGAATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCT  666

Query  262  ATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAG  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  ATTGCCATGCTTTTACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAG  740

Query  336  ATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAG---------  400
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct  741  ATACACCCCCAAAGAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAGGTATTCCAA  814

Query  401  -------------------------AGA----------------------GATTTCACCATTTTGCCCAGGACC  427
                                     |||                      |.|.|||  |.|.||.|||.||  
Sbjct  815  AGTTGATTACGTCTGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCA--ACTATGTCCACGA--  884

Query  428  TCTCCAACTCC---------------------------------------------------------------  438
                    |||                                                               
Sbjct  885  --------TCCAGTGACAGGAAAGACAAAATTAGTTGGAGATGTGGACTTCGAAGCTGTTAAAAAGAAAGCTGG  950

Query  439  --------------------------------------------------------------------------  438
                                                                                      
Sbjct  951  CTTTATCACTCCAGTTCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACCCTTCTGGCAG  1024

Query  439  -----------------  438
                             
Sbjct 1025  CTAAAAAAATCATTTAC  1041