Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13694
- Subject:
- XR_001741224.2
- Aligned Length:
- 2851
- Identities:
- 420
- Gaps:
- 2425
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TAGTCACGGAGACTGTTGGGCAGGATCTCTGGCTTGGTGGAAAGTGGGGCGTGCTGCCTAAAGTGATAGTTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGCCTTCTCTGTGCCGTCGCTATGGGAATGCCAGCTATATGTTGGCTGGGTGCGGGGCCCAGTCGCCAGGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTGCACGCTTCCACATCCTCAGAGGGCCCGGGACTTGGGTCCTGGCCCCGCCCCCTGCGGACCCGGCACTCT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCAGTTCCGTCCCCGGTCCTGGGAACCGCTCTTTACCCCACTCTGCGTGTCTGCCGGAACCTGGCTGGGAAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTACTTGCTGCCCTGCCAGCCCGGGTGAGGGCGGAGCCAGGCCTCCAGCCGCGAGGACTGGAGTCGCGGGAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGCCCCAGTCCGGAAGCCGGGGATCCGCGGCCATGACGGTGCCGGTCCGCGGCTTCTCGCTGCTCCGCGGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCCTTGGCCGAGCGCCGGCGTTGGGCAGAAGCACAGCACCCTCCGTAAGGGCACCGGGAGAGCCCGGGAGTGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTTCCGGGGCTTTCGGAGCAGCGGTGTGAGACATGAAGCCATTATTATATCAGGAACCGAAATGGCCAAGCATA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCAGAAAGAAATACAGCGAGGTGTGGAATCATGGGTTTCCCTTGGAAACAGAAGACCTCACCTCAGTATAATT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTAGTGGGAGATAACCCAGCAAGCCATACATATGTCAGGAATAAGATAAGAGCTGCCTCTGCTGTAGGTATTTG 740
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 741 TAGTGAGCTCATTCTAAAACCTAAGGATGTTTCTCAGGAAGAACTTTTGGACGTAACTGATCAATTGAATATGG 814
Query 5 ACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCACTAC----------------------------------- 43
|||||||||||||||||||||||||||||||||||||||
Sbjct 815 ACCCAAGAGTCAGCGGTATATTAGTTCAGTTACCACTACCAGGGAGTCGTGAGACATCAATCAACATATGTAAG 888
Query 44 -----------------------------------------------------------------CAGACCACG 52
|||||||||
Sbjct 889 AAGTACACTGGTTCCATCCAGAAAGGCGGGGACAACTTGAAGCAGGGGAGGAGTCTTCCAGGTCACAGACCACG 962
Query 53 TTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATATTATCAATATTGGA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TTGATGAGCGAACAATATGCAATGGAATTGCCCCAGAAAAAGATGTAGATGGATTTCATATTATCAATATTGGA 1036
Query 127 AGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAATAAAAAGAACAGG 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AGATTGTGCCTTGATCAGCATTCTCTCATACCTGCCACTGCCAGTGCTGTTTGGGAAATAATAAAAAGAACAGG 1110
Query 201 AATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCTATTGCCATGCTTT 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 AATTCAAACATTTGGAAAAAATGTGGTTGTGGCTGGAAGATCCAAGAACGTAGGGATGCCTATTGCCATGCTTT 1184
Query 275 TACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAGATACACCCCCAAA 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TACACACTGATGGAGAGCATGAACGGCCAGGAGGTGATGCAACTGTGACAATAGCTCACAGATACACCCCCAAA 1258
Query 349 GAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAG---------------------- 400
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGCAACTGAAGATTCATACGCAGCTGGCAGATATTATCATAGTTGCTGCAGGTATTCCAAAGTTGATTACGTC 1332
Query 401 ------------AGA----------------------GATTTCACCATTTTGCCCAGGACCTCTCCAACTCC-- 438
||| |.|.||| |.|.||.|||.|| |||
Sbjct 1333 TGATATGGTTAAAGAAGGTGCTGCTGTAATTGATGTGGGTATCA--ACTATGTCCACGA----------TCCAG 1394
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1395 TGACAGGAAAGACAAAATTAGTTGGAGATGTGGACTTCGAAGCTGTTAAAAAGAAAGCTGGCTTTATCACTCCA 1468
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1469 GTTCCAGGAGGTGTGGGACCCATGACAGTGGCAATGCTTCTGAAGAACACCCTTCTGGCAGCTAAAAAAATCAT 1542
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1543 TTACTAGATCACATGAAAGGATAAAGCAAACTGAAGTCATGCTATTTGTTTATTTGACAAAGGGTAAAACCTTT 1616
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1617 ATATTTTACTACAAAGCTATTTATTTCTACATGGTATTTATTTTTTCATGGGTGAAATCATTGTGAATCAATTG 1690
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1691 ATTCACATAGTTTTATGCATTTCCTGCTAATTTATTTTGAGTTTTAAGAAAACAACCAAAACAATTCCAATGAA 1764
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1765 AATTTTAGTAACAATTGTTTATTTTGAGGGTATTTGTTCATAACATTAAAACAATAAAGGGCTCATAATAAATA 1838
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1839 AATATATTTTTGACACAATTAAATATTACATAGAGTATGTTTACAACAAATATCCTGTCAGCCAAATGGTTACC 1912
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1913 CATATAAAATGTAATTTAGGTTTTGCTACTTGCATGCTAACATTTTTAATGTATTTTATGATCTATGTCATATA 1986
Query 439 -------------------------------------------------------------------------- 438
Sbjct 1987 TTAAAAAAGAGCTTGCTTACTACAAGAAAAATATTGAAATATTGAAAATATTGAAAATATTATTATTGAAAATA 2060
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2061 AAATCTTGATCTCAACTATCCCCCAAATGCATCCTATAAGTCCATCCTAATGAGAAATGATGTTCTATTTAAGG 2134
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2135 AAAGGAAAATATTCCGGGAAGGCAAAAAATGCAGTGCTGTTTGGAAGTGTAATGATTTTATCACATGGTGAATG 2208
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2209 ACTACTAAGAGTAATGATTATATCACATTGTGAATGACTACTTGCCACAGTAAAAATACATGAAGAATGTGTTA 2282
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2283 GGTTTAAACGTCGTTTCTTTCTTCTAAAAAATATTTGGTTAGTACCTTCACTGAGCAATAGTGGAAAAATAAAA 2356
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2357 AAATAAGTAAACAGAAAAAACTAAAGTTGTATTTTCCCACAAATATAGTATGAATGAGGTCATATTAAAGAACA 2430
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2431 GCAACTGTTAATGTTTGTTCACAAATTCAGAAATCTAATAGGAAAACATGATACTTTCAATGTGCCAAAACTAA 2504
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2505 ACCTTAGTATACAACTAAAAATCTCCTGCCTTCTTGCCTACCTGTCTTCCCTCTTCTGTTACAGAATTTGTTCC 2578
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2579 TCAAAGTAGATGCAATGTTTCTAACACAATTTAAATTAGGAAATATATATGAATGTCGTTGAAGTCTATTTTGA 2652
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2653 GACTGCTAAAGCTATTAATTGATACTGTGTTTTTATGCCCAAATCCCAGTATGTTTATGTACCAATAATGACTC 2726
Query 439 -------------------------------------------------------------------------- 438
Sbjct 2727 TTACCCAGCGCATGTCTTTATCAGTGTGTACTCGTGACGATTTGTGTGAAAATAGACTTGATGTTTATAATTAA 2800
Query 439 --------------------------------------- 438
Sbjct 2801 TACCATTACAACTGTATAATAAAAGCAATTTGAAGAAAA 2839
