Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13730
- Subject:
- NM_014834.4
- Aligned Length:
- 5100
- Identities:
- 185
- Gaps:
- 4905
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTCTTCTGCTCAGTGCCCGGCACTAGTGTGTGTCATGTCCCGGCTGCGTTTCTGGGGCCCATGGCCCCTCCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATGTGGCAACTATTGTGGCTACTAGTCAAGGAGGCTCAGCCTCTGGAGTGGGTCAAGGACCCGCTCCAGCTCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTCTAATCCCCTGGGGCCGCCTGAGTCCTGGTCTTCCCACTCCTCCCATTTCCCACGGGAATCTCCCCATGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTACTCTCCCAGCAGACCCGTGGGACTTTGATCACCTGGGGCCCTCTGCTTCCTCAGAGATGCCAGCCCCACC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCAGGAATCGACTGAAAATTTGGTTCCATTCCTGGACACCTGGGATTCAGCTGGAGAGCAGCCCCTGGAGCCAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCAGTTCTTGGCTTCACAGCAGGATTTAAAGGACAAGCTGAGTCCACAGGAAAGGCTCCCTGTTTCGCCCAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGCTGAAGAAAGATCCAGCTCAGCGTTGGAGCCTTGCTGAGATTATTGGAATTACACGCCAATTATCCACACC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGAGTCAGAAACAGACTTTGCAGAATGAATATTCCAGTACAGATACACCGTATCCCGGTAGCCTGCCTCCAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AACTCCGGGTGAAGTCAGATGAGCCTCCAGGGCCCTCTGAGCAAGTTGGACCTTCTCAATTCCATCTAGAGCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAACTCAAAATCCAGAGACCCTTGAAGACATCCAGTCCTCTTCACTCCAGCAAGAAGCCCCAGCACAGCTTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCTCCTTGAGGAAGAACCTTCTTCAATGCAGCAGGAGGCCCCAGCTCTGCCTCCAGAGTCCTCTATGGAGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCTAACTCTACCGAATCATGAGGTGTCAGTTCAACCTCCAGGTGAGGATCAAGCTTATTATCACTTGCCCAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTACAGTTAAACCTGCAGATGTGGAGGTTACCATAACTTCAGAGCCTACCAATGAGACAGAATCTTCCCAAGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGCAGGAGACCCCAATTCAGTTTCCAGAGGAGGTGGAACCTTCTGCAACCCAACAGGAGGCCCCAATTGAGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCCAGTTCCTCCTATGGAGCATGAACTTTCCATCAGTGAGCAGCAGCAGCCAGTTCAGCCTTCTGAGTCTCCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGGAGGTCGAATCTTCTCCGACCCAGCAGGAGACCCCAGGTCAGCCTCCAGAACATCATGAAGTCACAGTTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCTCCAGGTCACCATCAAACTCATCATTTAGCTTCACCCAGTGTCTCTGTGAAGCCTCCAGACGTGCAGCTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CCATAGCAGCAGAGCCTAGTGCAGAGGTGGGAACTTCTCTAGTCCACCAGGAGGCTACAACTCGGCTCTCAGGG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCAGGTAATGATGTAGAACCTCCCGCCATCCAGCACGGGGGCCCACCTCTGCTTCCAGAGTCATCAGAAGAAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGGACCTTTAGCAGTTCAACAGGAGACTTCATTTCAATCTCCGGAACCTATTAATAATGAGAACCCCTCTCCAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCAGCAGGAGGCTGCAGCTGAGCATCCACAGACCGCTGAGGAGGGTGAGTCTTCCCTAACCCATCAGGAGGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCAGCTCAGACTCCAGAGTTCCCTAATGTAGTTGTAGCTCAACCTCCAGAGCATTCACACCTGACTCAAGCCAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGTTCAACCTTTGGATCTGGGGTTTACCATCACTCCAGAATCCAAGACAGAGGTTGAACTTTCTCCAACCATGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGAGACCCCAACTCAGCCTCCTAAGAAAGTTGTACCCCAACTTCGAGTATATCAAGGGGTAACAAATCCAACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAGGTCAGGATCAAGCTCAGCATCCAGTGTCACCCAGCGTTACAGTTCAACTTTTGGACCTGGGACTTACCAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CACTCCAGAACCTACTACGGAGGTTGGACATTCTACACCCCCGAAGAGGACTATAGTTTCTCCAAAGCATCCTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGGTGACACTTCCACATCCAGACCAGGTTCAGACTCAGCATTCACACCTGACTCGAGCCACAGTTCAACCTTTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GACCTGGGGTTTACCATCACTCCAAAATCCATGACAGAGGTTGAACCTTCTACAGCCCTGATGACTACAGCTCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCTCCAGGACACCCTGAGGTGACACTTCCACCTTCAGACAAGGGTCAGGCTCAGCATTCACACCTGACTCAAG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCACCGTTCAACCTCTGGACCTGGAGCTTACCATAACTACAAAACCTACTACAGAGGTTAAACCATCTCCAACC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACGGAGGAGACCTCAACTCAGCCTCCAGACCTGGGACTTGCCATCATTCCAGAACCCACTACAGAGACTGGACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCTACAGCCCTGGAGAAGACTACAGCTCCTCGTCCAGACCGGGTTCAGACTCTGCATCGAAGCCTGACTGAAG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCACAGGTCCACCTACTGAACTAGAACCTGCTCAGGATTCACTGGTGCAGTCTGAAAGTTACACCCAAAATAAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTTTAACTGCACCAGAGGAACACAAGGCCTCCACAAGCACCAACATATGTGAGCTCTGTACCTGCGGAGATGA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GATGTTGTCATGTATTGATCTCAACCCAGAGCAGAGGCTCCGCCAAGTGCCTGTGCCAGAGCCCAACACCCACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ATGGCACCTTCACCATCTTAAATTTCCAAGGAAACTATATTTCTTACATTGATGGAAATGTATGGAAAGCATAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGTTGGACTGAGAAACTAATTCTCAGAGAAAATAACTTGACTGAATTACACAAGGATTCATTTGAAGGCCTGCT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATCCCTCCAGTATTTAGATTTATCCTGCAATAAAATACAGTCTATTGAAAGACATACATTTGAACCACTACCAT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTTTGAAGTTTATAAATCTTAGTTGCAATGTAATTACAGAACTCAGCTTTGGAACATTTCAGGCCTGGCACGGA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ATGCAGTTTTTACATAAGTTAATTCTCAATCACAATCCTCTGACAACTGTTGAAGATCCGTATCTCTTTAAATT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCAGCATTAAAATATCTAGACATGGGAACAACGCTAGTCCCACTTACAACACTTAAGAACATTCTCATGATGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTGTTGAACTGGAAAAACTGATCTTACCTAGCCATATGGCCTGCTGCCTCTGCCAATTTAAAAACAGCATTGAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCTGTCTGCAAGACAGTCAAGCTGCATTGCAACAGTGCATGTCTGACAAACACCACACATTGTCCTGAAGAAGC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATCGGTAGGGAATCCAGAAGGAGCGTTCATGAAGGTGTTACAAGCCCGGAAGAACTACACAAGCACTGAGCTGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TTGTTGAGCCAGAGGAGCCCTCAGACAGCAGTGGCATCAACTTGTCAGGCTTTGGGAGTGAGCAGCTAGACACC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AATGACGAGAGTGATTTTATCAGTACACTAAGTTACATCTTGCCTTATTTCTCAGCGGTAAACCTAGATGTGAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATCACTGTTACTACCGTTCATTAAACTGCCAACCACAGGAAACAGCCTGGCAAAGATTCAAACTGTAGGCCAAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACCGGCAGAGAGTGAAGAGAGTCCTCATGGGCCCAAGGAGCATCCAGAAAAGGCACTTCAAAGAGGTAGGAAGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CAGAGCATCAGGAGGGAACAGGGTGCCCAGGCATCTGTGGAGAACGCTGCCGAAGAAAAAAGGCTCACGAGTCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 AGCCCCAAGGGAGGTGGAACAGCCCCACACACAGCAGGGGCCTGAGAAGTTAGCGGGAAACGCCGTCTACACCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 AGCCTTCGTTCACCCAAGAGCATAAGGCAGCAGTCTCTGTGCTGAAACCCTTCTCCAAGGGCACGCCTTCTACC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TCCAGCCCTGCAAAAGCCCTACCACAGGTGAGAGACAGATCGAAAGACTTAACCCACGCTATTTCCATTTTAGA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AAGTGCAAAGGCTAGAGTTACAAATACGAAGACGTCTAAACCAATCGTACATGCCAGAAAAAAATACCGCTTTC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 ACAAAACTCGCTCCCACGTGACCCACAGAACAACCAAAGTCAAAAAGAGTCCAAAGGTCAGAAAGAAAAGTTAT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTGAGTAGACTGATGCTCGCAAACAGGCTTCCATTCTCTGCAGCGAAGAGCCTCATAAATTCCCCTTCACAAGG 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGCTTTTTCATCCTTAGGAGACCTGAGTCCTCAAGAAAACCCTTTTCTGGAAGTATCTGCTCTTTCAGAACATT 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TTATAGAGAAGAATAATACAAAACACACAACTGCAAGAAATGCCTTTGAAGAAAATGATTTTATGGAAAACACT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AACATGCCAGAAGGAACCATCTCTGAAAACACAAACTACAATCATCCTCCTGAGGCAGATTCCGCTGGGACTGC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 ATTCAACTTAGGGCCAACTGTTAAACAAACTGAGACAAAATGGGAATACAACAACGTGGGCACTGACCTGTCCC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 CCGAGCCCAAAAGCTTCAATTACCCATTGCTCTCGTCCCCAGGTGATCAGTTTGAAATTCAGCTAACCCAGCAG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CTACAGTCCCTTATCCCCAACAACAATGTGAGAAGGCTCATTGCTCATGTTATCCGGACCTTGAAGATGGACTG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CTCTGGGGCCCATGTGCAAGTGACCTGTGCCAAGCTCATCTCCAGGACAGGCCACCTGATGAAGCTTCTCAGTG 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GGCAGCAGGAAGTAAAGGCATCCAAGATAGAATGGGATACGGACCAATGGAAGATTGAGAACTACATTAATGAG 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 AGCACAGAAGCCCAGAGTGAACAGAAAGAGAAGTCGCTTGAGCTCAAAAAAGAAGTTCCAGGATATGGCTATAC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TGACAAACTCATCTTGGCATTAATTGTTACTGGAATACTAACGATTTTGATTATACTTTTCTGCCTCATTGTGA 4810
Query 1 ------------------------------ATGAAGAAGGATTCTCAAGGGGCATTTTCAGGTTTCTGCCACGG 44
|||||||||||||||||||||||||||||||.|||||||||.||
Sbjct 4811 TATGTTGTCACCGAAGGTCATTACAAGAAGATGAAGAAGGATTCTCAAGGGGCATTTTCAGATTTCTGCCATGG 4884
Query 45 AGGAGATGCTCTTCACGAAGGGAGAGTCA--------------------GACGGCCGCTCTGGCTTAAAGATAT 98
|||.||||||||||.|||||||||||||| |||.||||||||||.||||||||.|
Sbjct 4885 AGGGGATGCTCTTCGCGAAGGGAGAGTCAGGATGGACTTTCCTCATTTGGACAGCCGCTCTGGTTTAAAGATCT 4958
Query 99 GTACAAACCTCTCAGTGCCACAAGAGTAAATAATCACGCATGGAAGCTGCACAAGAAGTCATCTAATGAGGACG 172
|||||||||||||||||||||||||.||||||||||.||||||||||||||||||||||||||||||||||||.
Sbjct 4959 GTACAAACCTCTCAGTGCCACAAGAATAAATAATCATGCATGGAAGCTGCACAAGAAGTCATCTAATGAGGACA 5032
Query 173 AGATCCTCAACAGGGACCCTGGG--------------------------------------------- 195
|||||||||||||||||||||||
Sbjct 5033 AGATCCTCAACAGGGACCCTGGGGACAGCGAAGCCCCAACGGAGGAGGAGGAGAGTGAAGCCCTGCCA 5100
