Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13730
- Subject:
- NR_002940.2
- Aligned Length:
- 7238
- Identities:
- 195
- Gaps:
- 7043
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTTTTTTTTACCAATTATATTATTCCCTTCTCCCCAAGAAGTGGGCAGAAAAGCTTTGTTAACCTCCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTACAGATGAAGAAAAACAAGATCAGAGGTGCTAAGTGCTGTAGCCTAGTGCCAGGTCTTCTGGCCCCAATTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGTTCTCCCCAAGCCCATGCTTCTTCCACTTTCTCACAATCTTTACTTCTTCCTCTGACCCTCACCACCACCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAATGCTTTTAATTCTGGAAAAGAAACCCAGCTGCACACTGGCACACTTGACCTTCCTGCAGTCAGAAGCCTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGCTGATTCCCCATCCAAAATATTAGAGATGAAATGAAAGCAAAGTAGGCATCTGACAAAAGTTGCTTTTTCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTCTGCATTTTAGGACCTCAAGTAATGTTTATCCAGAAACTGCTATCATACCAGAGATTCACTGTGTATTTAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACATAGGCATACAATCTGGCAAATTTGAAAAACTCTTAACATACACCCCAAATCCCTGCCCAAATTTAAGAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAGGGTGGACACAGTGCTTTTTTCCATGTCGCATCTTCTGTGATGGGGCTACGATATGTGGGAGCAGAGAATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGAGGGTGGAGCGCATGCCAGATGAGGATCTATCAGCAATGGGAGGGGGCCTCCACTTTAGCATCTCCACCCTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCTCTCAGAGGACCGCCTTTCATTGCATTCAGCTGTGATGGTAGCAAGAACACAGGCGCACCGAGGACGAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAGCGGGAGCCTTGTGCTCTCTCTGCATCTGAGGCAGGACAGCACAGGGTATGGAGCAGTCTGCAGAGAGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGCTCATCAGCTCATCAGGGAAGCACTTGTCTTCCACCTTGGGCTTTGACTGAGCACTGGGCAATTGGACCCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGATCAATGAAATAATCCTAAGCAGAGTTACTCTATGTCACACTATGGAATGTTCCAAGTAGATGGCCGTGTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCAAAAGATATATTTTCTCCTTTTGTTGTTGCCATTTCATAGGTTTAGGATTGGGTGTGTGTGTCTCCTCTCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAATGGCACTCAAATGTTTGCTGACTCCTACTCTGCGTGACTGGGGTGTACAGCTATGGACTGATGCATCCCAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCATCATCTTTCACGAGCAAAGCAGTCTCTTTTTTGACAGCTGAAGAAGAATCTGTAGGGAATCCAGAAGGAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CATTCATGAAGATGTTACAAGCCCGGAAGAATTACACAAGCACTGAGCTGACTGTTGAGCCGGAGGAGCCCTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACAGCAGTGGCATCAACTTGTCAGGCTTTGGGAGTGAGCAGCTAGACACCAATGACGAGAGTGATGTTATCAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGCACTAAGTTACATTTGCCATATTTCTCAGCAGTAAACCTAGATGTGGAATCAATGTTACTACCGTTCATTAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTGCCAACCACAGGAAACAGCCTGGCAAAGATTCAAACTGTAGGCCAAAACCGGCAAAAAGTGAATAGAGTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCATGGGCCCAATGAGCATCCAGAAAAGGCACTTCAAAGAGGTGGGAAGGCAGAGCATCAGGAGGGAACAGGGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCCCAGGCATCTGTGGAGAACGCTGCCGAAGAAAAAAGGCTCGGGAGTCCAGCCCCAAGGGAGCTGGAACAGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCACACACAGCAGGGGCCTGAGAAGTTAGCGGGAAACGCCATCTACACCAAGCCTTCGTTCAGCCAAGAGCATA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGCAGCAGTCTCTGTGCTGACACCCTTCTCCAAGGGCGCGCCTTCTACCTCCAGCCCTGCAAAAGCCCTACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAGATGAGAGACAGATTGAAAGACAACACACACTATTTCCATTTTAGAAAGTGCAAAGGCTAGAGTTACAAATA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGAAGGCTTCTAAACCAATTTCACATTCCAGAAAAAAATACCGCTTTCACAAAACTCGCTCCGCATGACCCACA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GAACACCCAAGGTCAAAAAGAGTCCAAAGTTCAGAAAGAAAAGTTATCTGAGTAGACTGATGCTCGCAAACAGG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCTCCGTTCTCTGCAGCGAAGAGCCTCATAAATTCCCCTTCACAAGGGGCTTTTTCATCCTTAGGAGACCTGAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCCTCAAGAAAACCCTTTTCTGGAAGTATCTGCTCCTTCAGAACATTTTATAGAAACCACTAATATAAAAGACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAACTGCAAGAAATGCCTTGGAAGAAAATGTTTTTATGGAAAACACTAACATGCCAGAAGTCACCATCTCTGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 AACACAAACTACAATCATCCTCCTGAGGCAGATTCCGCTGGGACTGCATTCAACTTAGGGCCAACTGTTAAACA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AACTGAGACAAAATGGGAATACAACAACGTGGGCACTGACCTGTCCCCCGAGCCCAAAAGCTTCAATTACCCAT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGCTCAGTTTGAAATTCAGCTAACCCAGCAGCTACAGTCCCTTATCCCCAACAACAATGTGAGAAGGCTCATTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CTCATGTTATCCGGACCTTGAAGATGGACTGCTCTGGGGCCCATGTGCAAGTGACCTGTGCCAAGCTCATCTCC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 AGGACAGGCCACCTGATGAAGCTTCTCAGTGGGCAGCAGGAAGTAAAGGCATCTGAGATAGAATGGGATACGGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CCAATGGAAGACTGAGAACTACATTAATGAGAGCACGGAAGCCCAGAGTGAACAGAAAGAGAAGTCGCTTGAGC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCACAAAAGAAGTTCCAGGATACGGCTATACTGACAAACTCATCTTGGCATTAATTGTGACTGAAATACTAATG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ATTTTGATTATACTTTTCTGCCTCATTGTGGTTTAGGATTGGGTGTGTGTGTCTCCTCTCTGAATGGCACTCAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 ATGTTTGCTGACTCCTACTCTGCGTGACTGGGGTGTACAGCTATGGACTGATGCATCCCATCCCATCATCTTTC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 ACGAGCAAAGCAGTCTCTTTTTTGACAGCTGAAGAAGAATCTGTAGGGAATCCAGAAGGAGCATTCATGAAGAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTTACAAGCCCGGAAGAATTACACAAGCACTGAGCTGACTGTTGAGCCGGAGGAGCCCTCAGACAGCAGTGGCA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCAACTTGTCAGGCTTTGGGAGTGAGCAGCTAGACACCAATGACGAGAGTGATGTTATCAGTGCACTAAGTTAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATTTGCCATATTTCTCAGCAGTAAACCTAGATGTGGAATCAATGTTACTACCGTTCATTAAACTGCCAACCACA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GGAAACAGCCTGGCAAAGATTCAAACTGTAGGCCAAAACTGGCAAAAAGTGAATAGAGTCCTCATGGGCCCAAT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GAGCATCCAGAAAAGGCACTTCAAAGAGGTGGGAAGGCAGAGCATCAGGAGGGAACAGGGTGCCCAGGCATCTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGGAGAACGCTGCCGAAGAAAAAAGGCTCGGGAGTCCAGCCCCAAGGGAGCTGGAACAGCCTCACACACAGCAG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 GGGCCTGAGAAGTTAGCGGGAAACGCCATCTACACCAAGCCTTCGTTCAGCCAAGAGCATAAGGCAGCAGTCTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGTGCTGACACCCTTCTCCAAGGGCGCGCCTTCTACCTCCAGCCCTGCAAAAGCCCTACCACAGGTGAGAGACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GATTGAAAGACAACACACACTATTTCCATTTTAGAAAGTGCAAAGGCTAGAGTTACAAATATGAAGGCTTCTAA 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ACCAATTTCACATTCCAGAAAAAAATACCGCTTTCACAAAACTCGCTCCGCATGACCCACAGAACACCCAAGGT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CAAAAAGAGTCCAAAGTTCAGAAAGAAAAGTTATCTGAGTAGACTGATGCTCGCAAACAGGCCTCCGTTCTCTG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CAGCGAAGAGCCTCATAAATTCCCCTTCACAAGGGGCTTTTTCATCCTTAGGAGACCTGAGTCCTCAAGAAAAC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CCTTTTCTGGAAGTATCTGCTCCTTCAGAACATTTTATAGAAACCACTAATATAAAAGACACAACTGCAAGAAA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TGCCTTGGAAGAAAATGTTTTTATGGAAAACACTAACATGCCAGAAGTCACCATCTCTGAAAACACAAACTACA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 ATCATCCTCCTGAGGCAGATTCCGCTGGGACTGCATTCAACTTAGGGCCAACTGTTAAACAAACTGAGACAAAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 TGGGAATACAACAACGTGGGCACTGACCTGTCCCCCGAGCCCAAAAGCTTCAATTACCCATTGCTCAGTTTGAA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 ATTCAGCTAACCCAGCAGCTACAGTCCCTTATCCCCAACAACAATGTGAGAAGGCTCATTTCTCATGTTATCCG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 GACCTTGAAGATGGACTGCTCTGGGGCCCATGTGCAAGTGACCTGTGCCAAGCTCATCTCCAGGACAGGCCACC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 TGATGAAGCTTCTCAGTGGGCAGCAGGAAGTAAAGGCATCTGAGATAGAATGGGATACGGACCAATGGAAGACT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GAGAACTACATTAATGAGAGCACGGAAGCCCAGAGTGAACAGAAAGAGAAGTCGCTTGAGCTCACAAAAGAAGT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCCAGGATACGGCTATACTGACAAACTCATCTTGGCATTAATTGTGACTGAAATACTAATGATTTTGATTATAC 4514
Query 1 ------------------------------------------------ATGAAGAAGGATTCTCAAGGGGCATT 26
||||||||||||||||||||||||||
Sbjct 4515 TTTTCTGCCTCATTGTGATGTGTTGTCACCGAAGGTCATTACAAGAAGATGAAGAAGGATTCTCAAGGGGCATT 4588
Query 27 TTCAGGTTTCTGCCACGGAGGAGATGCTCTTCACGAAGGGAGAG------------------------------ 70
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 TTCAGGTTTCTGCCACGGAGGAGATGCTCTTCACGAAGGGAGAGTCAGGTACATTGGAGGATTCATTGCTGTGG 4662
Query 71 --------------------------------------------------------------------TCAGAC 76
||||||
Sbjct 4663 CCAGGGAAGGCAGAGGACATGCAAAATTAGTATTTCCCTTTCTATCTTCTAGGATGGACTTTTTTCATTCAGAC 4736
Query 77 GGCCGCTCTGGCTTAAAGATATGTACAAACCTCTCAGTGCCACAAGAGTAAATAATCACGCATGGAAGCTGCAC 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 GGCCGCTCTGGCTTAAAGATATGTACAAACCTCTCAGTGCCACAAGAGTAAATAATCACGCATGGAAGCTGCAC 4810
Query 151 AAGAAGTCATCTAATGAGGACGAGATCCTCAACAGGGACCCTGGG----------------------------- 195
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 AAGAAGTCATCTAATGAGGACGAGATCCTCAACAGGGACCCTGGGTAAATGACGGAGCCCTCACAGGTCCCATC 4884
Query 196 -------------------------------------------------------------------------- 195
Sbjct 4885 TAAAATGAGGAGGGGGTGAGAAGCTTAATTGCTCCTTTCAAGAATCAAAACCTTGGCATTGTTATTCTTATCCC 4958
Query 196 -------------------------------------------------------------------------- 195
Sbjct 4959 AGGGACAGCGAAGCCCCAACAGAGAAGGGGGAGGAGAGTGAAGCCCTGCCATAGGAGGAGAACCCAGCCCACCT 5032
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5033 CAGGCCTCCTGCAAAAACACATAGCATAAACAATACCATCAGAAAGAAAAGCAGGACTGAAGCCAGCGGCCCAC 5106
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5107 ACATCCACAGAGGCAGCGGGCAGAGCAAGCACAGGGCCATCGTTCCTGCCCTTGTTTCCCAGTCTAATTAGTCA 5180
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5181 CCCAGACCTGAAAACATATCCTCAGGGGGTGGAGATTTTACAATTACCATTGTTTTTGGTGCCCTCTCCCTTGC 5254
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5255 TTCATCAAGCATCAGTCATATAATACCACAGATTTGAACTCCTGCCCACAGGGGACCTCCCATCTCCTGGCCCC 5328
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5329 TATCATAGGATCACTGGGCCTACCTGCACTGTGGGGCCAAGCCCTGTCTTTTTCCCAAGCCCTCAAGCACACGC 5402
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5403 ATGAGTGTTCATCCCGACTTGGTAGGGGGCTTTTCACCCTTACAAGATGGCAAAAGATTCACATTGCTTTTTTA 5476
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5477 AAAATTTGTTTTTCTTTTTAAAAATCCCAACCCTTGGATAGCAGGGAGGTGCTGGAGGGGTAGAGTCAAGAAGA 5550
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5551 GTGTGAGAACAGTAATTTCCCAAGACTGCCCTCTGTGGGACTGTATTTCAGAAAACACACTGGTGGGGCTACCT 5624
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5625 CTCAATTCACATGTACTGCCCTAGCCTCTCCCCATCCCCGGCTGACGCTCATCCATAACTGCACTGTTCCATAA 5698
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5699 CAGCAGTAGAATGTTGCAGAAAGTGCTAGGATTCCTCCACTCCATCTTCAAAGAAAAAGTCGCTAATAAATCAC 5772
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5773 ATTTGGTAGGTTAGTGAATGTTAAACACATTAGTGAGCAAAAGAAAATAGGAATGAACAAGAATTGGTCATCTA 5846
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5847 CCTAACTGAACACAAATGAACTCTGGCAGTTCAGTAATAGGAGGTAAAGAACCACGCTAATTGCAGAACAGCAG 5920
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5921 CCCCCCTACCTTCCCAGGAGCAGTGTGACTGGGAAGCAGCCCCGTGTGTATGCTGGTGCAGGTTCTAAGCAAAG 5994
Query 196 -------------------------------------------------------------------------- 195
Sbjct 5995 TGAGCTGCCCATCAGTTCCGATGAGTTTGCTGATGCTAGACATATGACATCTGTTCTCTTGCTGCCTGCCCCAG 6068
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6069 TTATCTCCCAAAGTTCTTTACTGAGAATGAAAAGCATCTTTCTCTGTGTGGTGACTTCAGTAGGCCAACAAATA 6142
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6143 TTTGAGTTTAAAGCACAAGACTAGTCATAGGCAGAGCAGCGCTACCATTTACAATTTGCTTACTTGATGCTAAA 6216
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6217 CCGTGGGTTTGGCATTTTACAGTCATATCATCTAGCCCAGCAAGTCATGGAAGCATAGTTGTTAAAATCATCTG 6290
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6291 ACACTTTGGGAGGCTGAGGCGGGCGGATCACGAGGTCAGGAGATTGAGACCATCCTGGCTAACATGGTGAAACC 6364
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6365 CTGTCTCCACTAAAAATACAAAAAAATTAGCCGGGCGTGGTGGCAGGAGCCTGTAGTCCCAGCTACTCAGGAAG 6438
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6439 CTGAGGCAGGAGAATGGTGTGAACCTGGAAGGTGGAGCTTACAGTGAGCTGAGATCACGCCACTGCACTCCAGC 6512
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6513 CTGGGCAAGTGAGACTCCATCTCAAAAAAAAAAAAAAAAAAAAATCATCATCTGACAGATAAGGATACAGGGCT 6586
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6587 CGAAGAACGAAGGTGACCTGCCCAAAGTGTCCAAAGCCACACATACAAAGCAACAAATTAGGGTTTTAAGCTAG 6660
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6661 CACTGTTAGACTTCAAAGCCTCTTAACCATTCTACTGCCCTGCTGTAGGGCATGGGGAGATGGGGGGATAAGCC 6734
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6735 ATGGTTGCCATCAAAGAGTTAATATAACAATAACATGCAGATGGATGGCAGCTCCTGTTTATTGGCACCAGCTG 6808
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6809 TGGTCCAGGTACAGCGCTAAGCACTATAATTACACTGTTAAGTCATCAGAACAGAAGCTCCCCACACCAGCTCT 6882
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6883 AATAGGGGTGAGTGTTGGACATAAGCAGGGAGCTGAGAAGAAGCCAAGACAAGGCCGGTTGCAGTGACTCATGC 6956
Query 196 -------------------------------------------------------------------------- 195
Sbjct 6957 TTGTAATCCCAGCACTTTGGGAGGCTGAGGTAGGTGGACCACCTGAGGCAGGAGTTCAAGACCACCCCGGCCAA 7030
Query 196 -------------------------------------------------------------------------- 195
Sbjct 7031 TATGGCAAAACCCTGTCTCTACTAAAAATTACAAAAATTAGCTGGGGGTGGTGATGCACGCCTGTAATCCCAGT 7104
Query 196 -------------------------------------------------------------------------- 195
Sbjct 7105 TACTCAGGAAGCTGAGGGAGGGAGAATTGCTTGAACCTGGGAGGCGGAGCTTGCAGTGAGCTTATAATGGGCCA 7178
Query 196 ------------------------------------------------------------ 195
Sbjct 7179 CTGCACACTAGCCTGGGCAACAGAGCGAGATTCCATCTCAAAAAAAAAAAAAAGCCAACA 7238
