Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13742
- Subject:
- NM_001787.3
- Aligned Length:
- 2385
- Identities:
- 1178
- Gaps:
- 1194
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGTGATGAAAAGGACTCTTGGAAAGTGAAAACTTTAGATGAAATTCTTCAGGAAAAGAAACGAAGGAAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAAGAGGAGAAAGCAGAGATAAAACGCTTAAAAAATTCTGATGACCGGGATTCCAAGCGGGATTCCCTTGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGGGGAGCTGAGAGATCACCGCATGGAGATCACAATAAGGAACTCCCCGTATAGAAGAGAAGACTCTATGGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GACAGAGGAGAAGAAGATGATTCTTTGGCCATCAAACCACCCCAGCAAATGTCTCGGAAAGAAAAAGCTCATCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAGAAAAGATGAAAAGAGAAAAGAGAAACGTAGGCATCGTAGCCATTCAGCAGAAGGGGGGAAGCATGCTAGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAAAGAAAAAGAAAGAGAGCACGAACGTCGGAAACGGCATCGAGAAGAACAGGATAAAGCTCGCCGGGAATGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAAAGACAGAAGAGAAGGGAGATGGCAAGGGAGCATTCCAGGAGAGAAAGGGACCGCTTGGAGCAGTTAGAAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GAAGCGGGAGCGGGAGCGCAAGATGCGGGAGCAGCAGAAGGAGCAGCGGGAGCAGAAGGAGCGCGAGCGGCGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGAGGAGCGGCGCAAGGAGCGGGAGGCCCGCAGGGAAGTGTCTGCACATCACCGAACGATGAGAGAGGACTAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGCGACAAAGTGAAAGCCAGCCACTGGAGTCGCAGCCCGCCTCGGCCGCCGCGGGAGCGGTTCGAGTTGGGAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CGGCCGGAAGCCAGGTGAGGCCAGGCCGGCGCCTGCGCAGAAGCCAGCACAGTTAAAAGAAGAGAAAATGGAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGGGACCTGCTGTCCGACTTACAGGACATCAGCGACAGCGAGAGGAAGACCAGCTCGGCCGAGTCCTCGTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GCGGAATCAGGCTCAGGTTCTGAGGAAGAAGAGGAGGAGGAGGAAGAGGAGGAGGAGGAAGGGAGCACCAGTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAATCAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAGGAGGAGGAGACCGGCAGCAACTCTGAGGAGGCATCAG 1036
Query 1 ------------------------------------------ATGAAGAACGAGAAAATGAAAACCACCTCTTG 32
||||||||||||||||||||||||||||||||
Sbjct 1037 AGCAGTCTGCCGAAGAAGTAAGTGAGGAAGAAATGAGTGAAGATGAAGAACGAGAAAATGAAAACCACCTCTTG 1110
Query 33 GTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGTG----------- 95
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTTGTTCCAGAGTCACGGTTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGTGGGTGAGGGAAC 1184
Query 96 -------------------------------------------------------------------------- 95
Sbjct 1185 GCCGCAGAGCAGCGCCCTGACAGAGGGCGACTATGTGCCCGACTCCCCTGCCCTGTCGCCCATCGAGCTCAAGC 1258
Query 96 -------------------------------GGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATC 138
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGGAGCTGCCCAAGTACCTGCCGGCCCTGCAGGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATC 1332
Query 139 GAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGGAGGGCACCTATGGAGTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCT 1406
Query 213 GAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGC 286
|||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1407 GAAGATGGAGAAGGAGAAGGAGGGCTTCCCGATCACGTCGCTGAGGGAGATCAACACCATCCTCAAGGCCCAGC 1480
Query 287 ATCCCAACATTGTCACCGTTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTAT 360
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATCCCAACATCGTCACCGTTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTAT 1554
Query 361 GTGGAGCACGACCTCAAGAGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGAT 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTGGAGCACGACCTCAAGAGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGAT 1628
Query 435 GATCCAGCTGCTGCGTGGGGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACC 508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GATCCAGCTGCTGCGTGGGGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACC 1702
Query 509 TGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAG 582
|||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||
Sbjct 1703 TGCTGCTGAGCCACGCCGGCATCCTCAAGGTGGGTGACTTCGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAG 1776
Query 583 GCCTACACCCCGGTCGTGGTGACCCAGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCAC 656
|||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCTACACCCCGGTCGTGGTGACCCTGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCAC 1850
Query 657 GGCCGTGGACATGTGGTCAGTGGGCTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATT 730
||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 1851 GGCCGTGGACATGTGGTCAGTGGGTTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAAGT 1924
Query 731 CGGAAATCGATCAGATCAACAAAGTGTTCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGT 804
|.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||||||||.
Sbjct 1925 CAGAAATCGATCAGATCAACAAGGTGTTCAAGGATCTGGGGACCCCTAGTGAGAAAATCTGGCCCGGCTACAGC 1998
Query 805 GAGCTCCCAGTAGTCAAGAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCT 878
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 GAGCTCCCAGCAGTCAAGAAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCT 2072
Query 879 GCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGG 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GCTCTCAGACCAGGGCTTCGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGG 2146
Query 953 ACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCC 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACGGCCTCAAGCATGAGTATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCC 2220
Query 1027 AAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAGAGCGAGCAGCAGCGTGTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCT 2294
Query 1101 GGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCG 1174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGGTGACGACGACCTGAAGGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCG 2368
Query 1175 GCTTCAGCCTCAAGTTC 1191
|||||||||||||||||
Sbjct 2369 GCTTCAGCCTCAAGTTC 2385
