Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13742
- Subject:
- XM_006538512.3
- Aligned Length:
- 1701
- Identities:
- 1038
- Gaps:
- 510
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGGGAGGAGTACAGTGATAAGGGGAAGGTTGGCCACTGGAGCCGCAGCCCTCTGAGGCCACCAAGAGAGCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTTGAGATGGGAGACAACCGGAAGCCAGTAAAAGAAGAGAAGGTGGAAGAGAGAGACTTGTTGTCAGACCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGACATCAGTGACAGCGAGAGGAAAACCAGCTCAGCTGAGTCTTCATCAGCAGAATCAGGCTCAGGTTCTGAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGGAGGAGGAGGAAGAAGAAGAGGAAGAAGAAGAAGAAGGGAGCACCAGTGAAGAATCAGAGGAAGAAGAGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGAAGAAGAGGAGGAGGAAGAAGAGGAGACTGGGAGCAACTCTGAGGAGGCCTCTGAACAGTCCGCAGAAGAAG 370
Query 1 ------------------------ATGAAGAACGAGAAAATGAAAACCACCTCTTGGTTGTTCCAGAGTCACGG 50
|||||||..|||||||.||.||||||.||||||||||||||||||||||.
Sbjct 371 TCAGTGATGAGGAAATGAGTGAAGATGAAGACAGAGAAAACGAGAACCACATCTTGGTTGTTCCAGAGTCACGA 444
Query 51 TTCGACCGAGATTCCGGGGAGAGTGAAGAAGCAGAGGAAGAAGT------------------------------ 94
||.|||||||||||.|||||.||||||||||..|||||||||||
Sbjct 445 TTTGACCGAGATTCTGGGGACAGTGAAGAAGGGGAGGAAGAAGTTGGTGAAGGGACTCCACAGAGCAGTGCCCC 518
Query 95 -------------------------------------------------------------------------- 94
Sbjct 519 CACCGAAGGAGACTATGTTCCTGACTCTCCAGCACTGTCACCTATTGAGCTAAAACAAGAACTGCCCAAATACC 592
Query 95 ------------GGGGCTGCCGGAGCGTCGAGGAGTTCCAGTGCCTGAACAGGATCGAGGAGGGCACCTATGGA 156
.|||.|||.||||.||.||||||||.|||||.|||||||||||.||.||.|||||||||||.
Sbjct 593 TGCCAGCCCTGCAGGGATGCAGGAGTGTAGAGGAGTTTCAGTGTCTGAACAGGATTGAAGAAGGCACCTATGGG 666
Query 157 GTGGTCTACAGAGCAAAAGACAAGAAAACAGATGAAATTGTGGCTCTAAAGCGGCTGAAGATGGAGAAGGAGAA 230
|||||||||||||||||.|||||||||||||||||||||||||||||.||||||.|.|||||||||||||||||
Sbjct 667 GTGGTCTACAGAGCAAAGGACAAGAAAACAGATGAAATTGTGGCTCTGAAGCGGTTAAAGATGGAGAAGGAGAA 740
Query 231 GGAGGGCTTCCCGATCACGTCCCTGAGGGAGATCAACACCATCCTCAAGGCCCAGCATCCCAACATTGTCACCG 304
|||.||||||||.||||||||.||||||||.||||||||||||||||||||||||||.||||||||.|||||||
Sbjct 741 GGAAGGCTTCCCAATCACGTCGCTGAGGGAAATCAACACCATCCTCAAGGCCCAGCACCCCAACATCGTCACCG 814
Query 305 TTAGAGAGATTGTGGTGGGCAGCAACATGGACAAGATCTACATCGTGATGAACTATGTGGAGCACGACCTCAAG 378
|.||.||.|||||.|||||.||.||||||||||||||||||||.|||||||||||.|||||.||.|||||||||
Sbjct 815 TCAGGGAAATTGTTGTGGGAAGTAACATGGACAAGATCTACATTGTGATGAACTACGTGGAACATGACCTCAAG 888
Query 379 AGCCTGATGGAGACCATGAAACAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATCCAGCTGCTGCGTGG 452
|||||.||||||||||||||.||||||||||||||||||||||||||||||||||||||.|||||||||.||||
Sbjct 889 AGCCTAATGGAGACCATGAAGCAGCCCTTCCTGCCAGGGGAGGTGAAGACCCTGATGATTCAGCTGCTGAGTGG 962
Query 453 GGTGAAACACCTGCACGACAACTGGATCCTGCACCGTGACCTCAAGACGTCCAACCTGCTGCTGAGCCACGCCG 526
|||.||.|||||.||.|||||.||||||||.|||||||||||.|||||.||.|||||.|||||||||||.||.|
Sbjct 963 GGTAAAGCACCTCCATGACAATTGGATCCTACACCGTGACCTGAAGACCTCTAACCTCCTGCTGAGCCATGCTG 1036
Query 527 GCATCCTCAAGGTGGGTGATTTTGGGCTGGCGCGGGAGTACGGATCCCCTCTGAAGGCCTACACCCCGGTCGTG 600
||||.|||||||||||.||.|||||||||||.||||||||.||.||.||.||.|||||||||||.||.||.||.
Sbjct 1037 GCATTCTCAAGGTGGGCGACTTTGGGCTGGCTCGGGAGTATGGTTCACCCCTAAAGGCCTACACTCCAGTTGTT 1110
Query 601 GTGACCCAGTGGTACCGCGCCCCAGAGCTGCTGCTTGGTGCCAAGGAATACTCCACGGCCGTGGACATGTGGTC 674
||.||||.||||||.||.||||||||.||.|||||||||||.||||||||||||||.||.||||||||||||||
Sbjct 1111 GTAACCCTGTGGTATCGTGCCCCAGAACTACTGCTTGGTGCTAAGGAATACTCCACAGCTGTGGACATGTGGTC 1184
Query 675 AGTGGGCTGCATCTTCGGGGAGCTGCTGACTCAGAAGCCTCTGTTCCCCGGGAATTCGGAAATCGATCAGATCA 748
.||.||||||||.||.||.||.||||||||.|||||.|||||||||||.|||||.||.||.||.||||||||.|
Sbjct 1185 GGTAGGCTGCATATTTGGAGAACTGCTGACACAGAAACCTCTGTTCCCTGGGAAGTCAGATATTGATCAGATTA 1258
Query 749 ACAAAGTGTTCAAGGAGCTGGGGACCCCCAGTGAGAAAATCTGGCCCGGCTACAGTGAGCTCCCAGTAGTCAAG 822
||||..|.||||||||.|||||.||.||.|||||||||||||||||.|||||.|.|||.|||||||..||||||
Sbjct 1259 ACAAGATTTTCAAGGACCTGGGTACTCCTAGTGAGAAAATCTGGCCTGGCTATAATGACCTCCCAGCCGTCAAG 1332
Query 823 AAGATGACCTTCAGCGAGCACCCCTACAACAACCTCCGCAAGCGCTTCGGGGCTCTGCTCTCAGACCAGGGCTT 896
||||||||||||||||||.|.|||||.|||||||||||||||.|.||.||||||.||.|.|||||.||.|||||
Sbjct 1333 AAGATGACCTTCAGCGAGTATCCCTATAACAACCTCCGCAAGAGATTTGGGGCTTTGTTATCAGATCAAGGCTT 1406
Query 897 CGACCTCATGAACAAGTTCCTGACCTACTTCCCCGGGAGGAGGATCAGCGCTGAGGACGGCCTCAAGCATGAGT 970
.||.||||||||||||||||||||.||||.|||.||.||||||||||.|||.||.||.|||||||||||.||.|
Sbjct 1407 TGATCTCATGAACAAGTTCCTGACATACTACCCTGGCAGGAGGATCAACGCAGAAGATGGCCTCAAGCACGAAT 1480
Query 971 ATTTCCGCGAGACCCCCCTCCCCATCGACCCCTCCATGTTCCCCACGTGGCCCGCCAAGAGCGAGCAGCAGCGT 1044
|||||||.|||||.|||||||||||||||||.||||||||||||||||||||.||||||||.|||||||||.|.
Sbjct 1481 ATTTCCGAGAGACTCCCCTCCCCATCGACCCATCCATGTTCCCCACGTGGCCTGCCAAGAGTGAGCAGCAGAGA 1554
Query 1045 GTGAAGCGGGGCACCAGCCCGAGGCCCCCTGAGGGAGGCCTGGGCTACAGCCAGCTGGGTGACGACGACCTGAA 1118
||||||||.|||||.||.||..||||.||||||||.||||||||||||||||||||||||||.||.||||||||
Sbjct 1555 GTGAAGCGAGGCACGAGTCCACGGCCTCCTGAGGGCGGCCTGGGCTACAGCCAGCTGGGTGATGATGACCTGAA 1628
Query 1119 GGAGACGGGCTTCCACCTTACCACCACGAACCAGGGGGCCTCTGCCGCGGGCCCCGGCTTCAGCCTCAAGTTC 1191
||||||||||||||||||.||||||||.||||||||.|||||.||.||.|||||.||||||||||||||||||
Sbjct 1629 GGAGACGGGCTTCCACCTCACCACCACCAACCAGGGAGCCTCAGCTGCAGGCCCTGGCTTCAGCCTCAAGTTC 1701
