Nucleotide Global Alignment

Description

• Query: ccsbBroad304_13840
• Subject: XM_011526554.3
• Aligned Length: 1494
• Identities: 767
• Gaps: 726

Alignment

Query    1  ATGGACAGCATAAGCACAGCCATCTTACTCCTGCTCCTGGCTCTCGTCTGTCTGCTCCTGACCCTAAGCTCAAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGATAAGGGAAAGCTGCCTCCGGGACCCAGACCCCTCTCAATCCTGGGAAACCTGCTGCTGCTTTGCTCCCAAG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACATGCTGACTTCTCTCACTAAGCTGAGCAAGGAGTATGGCTCCATGTACACAGTGCACCTGGGACCCAGGCGG  222
                                                        ||||||||||||||||||||||||||||||
Sbjct    1  --------------------------------------------ATGTACACAGTGCACCTGGGACCCAGGCGG  30

Query  223  GTGGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCTGGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   31  GTGGTGGTCCTCAGCGGGTACCAAGCTGTGAAGGAGGCCCTGGTGGACCAGGGAGAGGAGTTTAGTGGCCGCGG  104

Query  297  TGACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCATCGCCTTCTCCAGTGGGGATCGATGGAAGGTCC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105  TGACTACCCTGCCTTTTTCAACTTTACCAAGGGCAATGGCATCGCCTTCTCCAGTGGGGATCGATGGAAGGTCC  178

Query  371  TGAGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATGGGGAAGAGAAGCATTGAGGAGCGAATCCTAGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  179  TGAGACAGTTCTCTATCCAGATTCTACGGAATTTCGGGATGGGGAAGAGAAGCATTGAGGAGCGAATCCTAGAG  252

Query  445  GAGGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGGCGAGCCCTTTGACCCCACGTTTGTGCTGAGTCG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  253  GAGGGCAGCTTCCTGCTGGCGGAGCTGCGGAAAACTGAAGGCGAGCCCTTTGACCCCACGTTTGTGCTGAGTCG  326

Query  519  CTCAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCCGCTTCGACTATGATGATGAGCGTCTGCTCACCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  CTCAGTGTCCAACATTATCTGTTCCGTGCTCTTCGGCAGCCGCTTCGACTATGATGATGAGCGTCTGCTCACCA  400

Query  593  TTATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGCCCCTGGGGCGAGTTGTACGACATCTTCCCGAGC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  401  TTATCCGCCTTATCAATGACAACTTCCAAATCATGAGCAGCCCCTGGGGCGAGTTGTACGACATCTTCCCGAGC  474

Query  667  CTCCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCAGAACTTCAAGTGCCTGAGAGACCTCATCGCCCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475  CTCCTGGACTGGGTGCCTGGGCCGCACCAACGCATCTTCCAGAACTTCAAGTGCCTGAGAGACCTCATCGCCCA  548

Query  741  CAGCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTCCCCGGGACTTCATCCAGTGCTTCCTCACCAAGA  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  549  CAGCGTCCACGACCACCAGGCCTCGCTAGACCCCAGATCTCCCCGGGACTTCATCCAGTGCTTCCTCACCAAGA  622

Query  815  TGGCAGAGGAGAAGGAGGACCCACTGAGGCACTTCCACATGGATACCCTGCTGATGACCACACATAACCTGCTC  888
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  623  TGGCAGAGGAGAAGGAGGACCCACTGAGCCACTTCCACATGGATACCCTGCTGATGACCACACATAACCTGCTC  696

Query  889  TTTGGCGGCACCAAGAC---------------------------------------------------------  905
            |||||||||||||||||                                                         
Sbjct  697  TTTGGCGGCACCAAGACGGTGAGCACCACGCTGCACCACGCCTTCCTGGCACTCATGAAGTACCCAAAAGTTCA  770

Query  906  -GCCCGCGTGCAGGAGGAGATCGACCTCGTGGTGGGACGCGCGCGGCTGCCGGCGC------------------  960
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||                  
Sbjct  771  AGCCCGCGTGCAGGAGGAGATCGACCTCGTGGTGGGACGCGCGCGGCTGCCGGCGCTGAAGGACCGCGCGGCCA  844

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct  845  TGCCTTACACAGACGCGGTGATCCACGAGGTGCAGCGCTTTGCAGACATCATCCCCATGAACTTGCCGCACCGC  918

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct  919  GTCACTAGGGACACGGCCTTTCGCGGCTTCCTGATACCCAAGGGCACCGATGTCATCACCCTCCTTAACACCGT  992

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct  993  CCACTACGACCCCAGCCAGTTCCTGACGCCCCAGGAGTTCAACCCCGAGCATTTTTTGGATGCCAATCAGTCCT  1066

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1067  TCAAGAAGAGTCCAGCCTTCATGCCCTTCTCAGCTGGTGAGGGCAGGAATCAGAGTCTTTCTGGCCCAATTTCT  1140

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1141  ACCTACATTCCTCACCCTAATTCCACTTGCCAAATCCTCTCACTCCTTCCTTCCACCCATTCTCAGCTTTGGAT  1214

Query  961  --------------------------------------------------------------------------  960
                                                                                      
Sbjct 1215  GCACAGAGACATTCATTCCTCCTCTCAACTCTGCTCCTATAGGCAAGTAGTGACTAAAATCCTCGTGAAGCAAG  1288

Query  961  --------------  960
                          
Sbjct 1289  GTGGGGAGGTTGAT  1302