Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13863
Subject:
XM_006518566.3
Aligned Length:
3027
Identities:
1078
Gaps:
1833

Alignment

Query    1  ATGGTAGCGCTGACGCTGTGGCTTCTCCCCTGGATATGCCAGTGCGTGTCGGTGCGGGCCGACTCCATCATCCA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CATCGGTGCCATCTTCGAGGAGAACGCGGCCAAGGACGACAGGGTGTTCCAGTTGGCGGTATCCGACCTGAGCC  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TCAACGATGACATCCTGCAGAGCGAGAAGATCACCTACTCCATCAAGGTCATCGAGGCCAACAACCCATTCCAG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  GCTGTGCAGGAAGCCTGTGACCTCATGACCCAGGGGATTTTGGCCTTGGTCACGTCCACTGGCTGTGCATCTGC  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAATGCCCTGCAGTCCCTCACGGATGCCATGCACATCCCACACCTCTTTGTCCAGCGCAACCCGGGAGGGTCGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  CACGCACCGCATGCCACCTGAACCCCAGCCCCGATGGTGAGGCCTACACACTGGCTTCGAGACCACCCGTCCGC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CTCAATGATGTCATGCTCAGGCTGGTGACGGAGCTGCGCTGGCAGAAGTTCGTCATGTTCTACGACAGCGAGTA  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  TGATATCCGTGGGCTTCAAAGCTTTCTGGACCAGGCCTCGCGGCTGGGCCTTGACGTCTCTTTACAAAAGGTGG  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  ACAAGAACATTAGCCACGTATTCACCAGCCTCTTCACCACGATGAAGACAGAGGAGCTGAATCGCTACCGGGAC  666
                                                     ||||||||.||||||||||||||||||||||||
Sbjct    1  -----------------------------------------ATGAAGACCGAGGAGCTGAATCGCTACCGGGAC  33

Query  667  ACGCTTCGCCGCGCCATCCTGCTGCTCAGCCCACAGGGAGCCCACTCCTTCATCAACGAGGCCGTGGAGACCAA  740
            ||.||.|||||.|||||.||.|||||||||||||||||.||.||||||||||||||.|||||.|||||||||||
Sbjct   34  ACACTGCGCCGTGCCATTCTACTGCTCAGCCCACAGGGGGCGCACTCCTTCATCAATGAGGCTGTGGAGACCAA  107

Query  741  CCTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCGGAGATCCTGGATCTGGTCC  814
            |.||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct  108  CTTGGCTTCCAAGGACAGCCACTGGGTCTTTGTGAATGAGGAAATCAGTGACCCCGAGATCCTGGATCTGGTCC  181

Query  815  ATAGTGCCCTTGGAAGGATGACCGTGGTCCGGCAAATCTTTCCGTCTGCAAAGGACAATCAGAAATGCACGAGG  888
            |.|||||||||||.||||||||||||||||||||||||||.||.||||||||||||||.||||||||.|.||||
Sbjct  182  ACAGTGCCCTTGGCAGGATGACCGTGGTCCGGCAAATCTTCCCATCTGCAAAGGACAACCAGAAATGTATGAGG  255

Query  889  AACAACCACCGCATCTCCTCCCTGCTCTGCGACCCCCAGGAAGGCTACCTCCAGATGCTGCAGATCTCCAACCT  962
            ||.||||||||||||||||||||||||||.||.||.|||||||||||||||||.|||||||||||||||||.||
Sbjct  256  AATAACCACCGCATCTCCTCCCTGCTCTGTGATCCACAGGAAGGCTACCTCCAAATGCTGCAGATCTCCAATCT  329

Query  963  CTATCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTTCACAGGAAGCTGGAGGACCGGAAGTGGCATAGCA  1036
            |||.|||||||||||||||||||||||||||||||||||.||||||||||||||.|||||||||||||||||.|
Sbjct  330  CTACCTGTATGACAGTGTTCTGATGCTGGCCAACGCCTTCCACAGGAAGCTGGAAGACCGGAAGTGGCATAGTA  403

Query 1037  TGGCGAGCCTCAACTGCATACGGAAATCCACTAAGCCATGGAATGGTGGGAGGTCCATGCTGGATACCATCAAA  1110
            ||||.|||||.||||||||.|||||.||.||.||||||||||||||.|||||.||||||||.||.||.||.|||
Sbjct  404  TGGCAAGCCTTAACTGCATCCGGAAGTCTACCAAGCCATGGAATGGAGGGAGATCCATGCTAGACACGATTAAA  477

Query 1111  AAGGGCCACATCACTGGCCTCACTGGGGTGATGGAGTTTCGGGAGGACAGTTCGAATCCCTATGTCCAGTTTGA  1184
            |||||.||.||||||||||||||.|||||.||||||||||||||.||.||.||.|||||.||||||||||||||
Sbjct  478  AAGGGACATATCACTGGCCTCACAGGGGTTATGGAGTTTCGGGAAGATAGCTCAAATCCTTATGTCCAGTTTGA  551

Query 1185  AATCCTTGGCACTACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGTTGGCGACATGGGACTCAGAGAAGG  1258
            ||||||||||||.||||||||||||||||||||||||||||||||||||.||||.||.||||||||.|||||||
Sbjct  552  AATCCTTGGCACAACCTATAGTGAGACTTTTGGCAAAGACATGCGCAAGCTGGCCACCTGGGACTCGGAGAAGG  625

Query 1259  GCTTGAATGGCAGCTTGCAAGAGAGGCCCATGGGCAGCCGCCTCCAAGGATTGACTCTTAAAGTGGTGACTGTC  1332
            |||||||||||||..|.||.||||||||||||||||||||||||||||||.|||||||.|||||||||||||||
Sbjct  626  GCTTGAATGGCAGTCTACAGGAGAGGCCCATGGGCAGCCGCCTCCAAGGACTGACTCTCAAAGTGGTGACTGTC  699

Query 1333  TTGGAAGAGCCTTTCGTGATGGTGGCTGAGAACATCCTAGGACAGCCCAAGCGCTACAAAGGGTTCTCCATAGA  1406
            ||||||||||||||.||||||||.||||||||.|||||.|||||.||||||||.||||||||||||||||||||
Sbjct  700  TTGGAAGAGCCTTTTGTGATGGTAGCTGAGAATATCCTTGGACAACCCAAGCGTTACAAAGGGTTCTCCATAGA  773

Query 1407  TGTCCTGGATGCACTGGCCAAGGCTCTGGGCTTTAAATATGAGATTTACCAAGCCCCTGATGGCAGGTACGGTC  1480
            |||.||||||||||||||.||||||||.||.||.|||||||||||.|||||.|||||||||||||||||.||||
Sbjct  774  TGTGCTGGATGCACTGGCTAAGGCTCTAGGATTCAAATATGAGATATACCAGGCCCCTGATGGCAGGTATGGTC  847

Query 1481  ACCAGCTCCATAACACCTCCTGGAACGGGATGATCGGGGAGCTCATCAGCAAGAGAGCAGACTTGGCCATCTCT  1554
            |||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct  848  ACCAGCTCCATAACACCTCCTGGAATGGGATGATCGGGGAGCTCATTAGCAAGAGAGCAGACTTGGCCATCTCT  921

Query 1555  GCCATCACCATCACCCCAGAGAGGGAGAGCGTTGTGGACTTCAGCAAGCGGTACATGGACTATTCAGTGGGGAT  1628
            ||.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||
Sbjct  922  GCTATTACCATCACCCCAGAGAGAGAGAGCGTTGTGGACTTCAGCAAGCGCTACATGGACTACTCAGTGGGGAT  995

Query 1629  TCTAATTAAGAAGCCCGAGGAGAAAATCAGCATCTTCTCCCTCTTTGCTCCATTTGATTTCGCTGTGTGGGCCT  1702
            .||.||.||||||||.||||||||.|||||||||||.|||||.||.||.||.|||||.||.||.||||||||||
Sbjct  996  CCTCATCAAGAAGCCTGAGGAGAAGATCAGCATCTTTTCCCTTTTCGCCCCCTTTGACTTTGCGGTGTGGGCCT  1069

Query 1703  GCATTGCAGCAGCCATCCCTGTGGTTGGTGTGCTGATATTTGTGTTGAACAGGATACAGGCTGTGAGGGCTCAG  1776
            |||||||.||||||||.||||||||.||.|||||.|||||.||||||||..|||||||||||||.||..|||||
Sbjct 1070  GCATTGCCGCAGCCATTCCTGTGGTGGGCGTGCTCATATTCGTGTTGAATCGGATACAGGCTGTAAGATCTCAG  1143

Query 1777  AGTGCTGCCCAGCCCAGGCCGTCAGCTTCTGCCACTCTGCACAGCGCCATC-----------------------  1827
            |||||..|||||||..|.||.||.|||||||||||.||||||||.|||||.                       
Sbjct 1144  AGTGCCACCCAGCCACGACCCTCGGCTTCTGCCACCCTGCACAGTGCCATTTGGATTGTCTATGGAGCCTTTGT  1217

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1218  CCAGCAAGGTGGTGAGTCTTCGGTGAACTCTGTGGCCATGCGCATCGTGATGGGCAGCTGGTGGCTCTTCACCC  1291

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1292  TCATTGTGTGTTCCTCCTACACAGCCAACCTGGCCGCTTTCCTCACAGTGTCTAGGATGGACAACCCCATAAGG  1365

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1366  ACATTTCAGGACCTGTCCAAGCAACTGGAGATGTCTTATGGCACTGTCCGGGACTCTGCTGTCTATGAGTACTT  1439

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1440  CAGAGCCAAGGGGACCAATCCCCTGGAGCAGGATAGCACTTTTGCTGAGCTCTGGCGGACCATAAGCAAGAATG  1513

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1514  GAGGGGCTGACAACTGTGTGTCCAATCCTTCAGAAGGTATCAGGAAGGCAAAGAAGGGGAACTACGCCTTTCTA  1587

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1588  TGGGATGTGGCCGTGGTGGAGTATGCAGCCCTGACAGATGACGACTGCTCAGTGACTGTCATCGGCAACAGCAT  1661

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1662  CAGCAGCAAGGGCTACGGGATTGCCCTGCAACATGGCAGCCCCTACAGGGACCTTTTCTCCCAGAGGATCCTGG  1735

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1736  AGCTGCAAGACACAGGGGACCTGGATGTGCTCAAGCAGAAGTGGTGGCCACACACAGGTCGATGTGACCTCACC  1809

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1810  AGCCATTCCAGTACCCAGACTGAAGGCAAATCCCTTAAGCTGCACAGCTTCGCTGGGGTCTTCTGCATTTTGGC  1883

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1884  CATTGGCCTCCTTCTTGCCTGCCTCGTGGCTGCTCTAGAGTTATGGTGGAACAGCAACCGGTGCCACCAGGAGA  1957

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 1958  CCCCCAAAGAGGACAAAGAAGTGAATCTGGAGCAGGTACACCGGCGCATCAACAGCCTCATGGATGAAGACATT  2031

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2032  GCTCACAAGCAAATTTCCCCAGCGTCCATTGAGCTTTCTGCCCTAGAGATGGGGGGCCTGGCTCCAAGCCAAGC  2105

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2106  TTTGGAGCCCACGAGGGAGTACCAGAACACCCAGCTCTCAGTCAGCACCTTTCTGCCGGAGCAGAGCAGCCATG  2179

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2180  GCACCAGCCGGACACTGTCGTCAGGGCCCAGCAGCAACCTGCCACTGCCACTGAGCAGCTCAGCCACTATGCCC  2253

Query 1828  --------------------------------------------------------------------------  1827
                                                                                      
Sbjct 2254  TCAATTCAGTGCAAACACAGGTCGCCCAATGGGGGACTGTTTCGACAGAGCCCGGTGAAGACCCCCATCCCTAT  2327

Query 1828  -------------------------------------------------------------------  1827
                                                                               
Sbjct 2328  GTCCTTCCAGCCCGTGCCTGGAGGCGTCCTTCCAGAGGCTCTGGACACCTCTCATGGCACCTCCATC  2394

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