Nucleotide Global Alignment

Description

Query:
ccsbBroad304_13869
Subject:
XM_017010814.1
Aligned Length:
1348
Identities:
646
Gaps:
629

Alignment

Query    1  ATGGCCGTCATGGCGCCCCGAACCCTCNTCCTGCTACTCTCGGGGGCNCTGGCCCTGACCCAGACCTGGGCGGG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CTCNCACTCCATGAGGTATTTCTTCACATCCGTGTCCCGGCCCGGCCGCGGGGAGCCCCGCTTCATCGCNGTGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GCTACGTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGCCAGANGATGGAGCCGCGGGCGCCG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  TGGATAGAGCAGGAGGGGCCGGAGTATTGGGACCAGGAGACACGGAATATGAAGGCCCACTCACAGACTGACCG  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  AGCGAACCTGGGGACCCTGCGCGGCTACTACAACCAGAGCGAGGACGGTTCTCACACCATCCAGATAATGTATG  370
                                                                               |||.|||
Sbjct    1  -------------------------------------------------------------------ATGAATG  7

Query  371  GCTGCGACGTGGGGCCGGACGGGCGCTTCCTCCGCGGGTACCGGCAGGACGCCTACGACGGCAAGGATTACATC  444
            ||||||||.|||||||.|||||.|||.|||||||||||||.|..|||.||||.|||||||||||||||||||||
Sbjct    8  GCTGCGACATGGGGCCCGACGGACGCCTCCTCCGCGGGTATCACCAGCACGCGTACGACGGCAAGGATTACATC  81

Query  445  GCCCTGAACGAGGACCTGCGCTCTTGGACCGCGGCGGACATGGCAGCTCAGATCACCAAGCGCAAGTGGGAGGC  518
            .||||||||||||||||||||||.||||||||||||||||..|..||||||||||||.|||||           
Sbjct   82  TCCCTGAACGAGGACCTGCGCTCCTGGACCGCGGCGGACACCGTGGCTCAGATCACCCAGCGC-----------  144

Query  519  GGTCCATGCGGCGGA-------GCAGCGGAG---AG--TCTACCTGGAGGGCCGGTGCGTGGACGGGCTCCGCA  580
             .||.|||.|||.||       ||||.||||   ||  .|||||||||||||..||||.||||...||||||||
Sbjct  145  -TTCTATGAGGCAGAGGAATATGCAGAGGAGTTCAGGACCTACCTGGAGGGCGAGTGCCTGGAGTTGCTCCGCA  217

Query  581  GATACCTGGAGAACGGGAAGGAGACGCTGCAGCGCACGGACCCCCCCAAGACACATATGACCCACCACCCCATC  654
            |||||.|||||||.||||||||||||||.||||||.|.||.||.||.|||.||||..|..||||||||||||||
Sbjct  218  GATACTTGGAGAATGGGAAGGAGACGCTACAGCGCGCAGATCCTCCAAAGGCACACGTTGCCCACCACCCCATC  291

Query  655  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACACTGACCTGGCAGCG  728
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  292  TCTGACCATGAGGCCACCCTGAGGTGCTGGGCCCTGGGCTTCTACCCTGCGGAGATCACGCTGACCTGGCAGCG  365

Query  729  GGATGGGGAGGACCAGACCCAGGACACGGAGCTCGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGT  802
            ||||||||||||.||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||||||
Sbjct  366  GGATGGGGAGGAACAGACCCAGGACACAGAGCTTGTGGAGACCAGGCCTGCAGGGGATGGAACCTTCCAGAAGT  439

Query  803  GGGCGGCTGTGGTGGTGCCTTCTGGAGAGGAGCAGAGATACACCTGCCATGTGCAGCATGAGGGTCTGCCCAAG  876
            ||||.|||||||||||||||.||||||||||.|||||||||||.||||||||||||||.|||||.||||||.||
Sbjct  440  GGGCCGCTGTGGTGGTGCCTCCTGGAGAGGAACAGAGATACACATGCCATGTGCAGCACGAGGGGCTGCCCCAG  513

Query  877  CCCCTCACCCTGAGATGGGAGCTGTCTTCCCAGCCCACCATCCCCATCGTGGGCATCATTGCTGGCCTGGTTCT  950
            |||||||.||||||||||||||.||||.|||||||||||||||||||||||||||||.||||||||||.|||.|
Sbjct  514  CCCCTCATCCTGAGATGGGAGCAGTCTCCCCAGCCCACCATCCCCATCGTGGGCATCGTTGCTGGCCTTGTTGT  587

Query  951  CCTTGGAGCTGTGATCACTGGAGCTGTGGTCGCTGCCGTGATGTGGAGGAGGAAGAGCTCAGATAGAAAAGGAG  1024
            |||||||||||||.||||||||||||||||||||||.|||||||||||||.||||||||||||||||||..|||
Sbjct  588  CCTTGGAGCTGTGGTCACTGGAGCTGTGGTCGCTGCTGTGATGTGGAGGAAGAAGAGCTCAGATAGAAACAGAG  661

Query 1025  GGAGTTACACTCAGGCTGCAAG------CAGTG---------------------ACA--GTGCCCA--------  1061
            ||||.|||.|||||||||| ||      |||||                     |||  |||..||        
Sbjct  662  GGAGCTACTCTCAGGCTGC-AGCCTACTCAGTGGTCAGCGGAAACTTGATGATAACATGGTGGTCAAGCTTATT  734

Query 1062  ----------GGGCTCT------GAT-------GTGTCTC-----TCACAG---CTT--------GTAAAGTG-  1095
                      |.|||||      |||       .||.|||     ||||||   |||        |.||.||| 
Sbjct  735  TCTCCTGGGGGTGCTCTTCCAAGGATATTTGGGCTGCCTCCGGAGTCACAGTGTCTTGGGCCGCCGGAAGGTGG  808

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct  809  GTGACATGTGGATCTTGTTTTTTTTGTGGCTGTGGACATCTTTCAACACTGCCTTCTTGGCCTTGCAAAGCCTT  882

Query 1096  --------------------------------------------------------------------------  1095
                                                                                      
Sbjct  883  CGCTTTGGCTTCGGCTTTAGGAGGGGCAGGAGCTTCCTTCTTCGTTCTTGGCACCATCTTATGAAAAGGGTCCA  956

Query 1096  ----------------  1095
                            
Sbjct  957  GATTAAGATTTTTGAC  972