Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13896
- Subject:
- NM_001164776.2
- Aligned Length:
- 1120
- Identities:
- 285
- Gaps:
- 821
Alignment
Query 1 ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAACTTATTGCAAGG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGAGTCCATCTTCCACGAGAAACAAGAAGGCTCACTTTGTGCTCAACATTGCCTGAATAACTTATTGCAAGG 74
Query 75 AGAATATTTTAGCCCCGTGGAATTATCCTCAATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAG 148
|||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 AGAATATTTTAGCCCTGTGGAATTATCCTCAATTGCACATCAGCTGGATGAGGAGGAGAGGATGAGAATGGCAG 148
Query 149 AAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTT 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AAGGAGGAGTTACTAGTGAAGATTATCGCACGTTTTTACAGCAGCCTTCTGGAAATATGGATGACAGTGGTTTT 222
Query 223 TTCTCTATTCAGGTTATA--AGCAATGCCTTGAAAGTTTGGGGTTTAGAACTAATCCTGTTCAACAGTCCAG-A 293
|||||||||||| |.| |||| |||| .|| |||||| ||| |
Sbjct 223 TTCTCTATTCAG---ACAGCAGCA--------AAAG---------CAG-------------CAACAG--CAGCA 261
Query 294 GTATCAGAGGCTCAGGATC-----GATCCTATAAATGAAAGA--TCATTTATATGCAATTATAAGGAACACTGG 360
|.|.||| |||.|.| || ||||| .|.||.||| |||..|..|||
Sbjct 262 GCAGCAG-----CAGCAGCAGGGGGA-CCTAT-CAGGACAGAGTTCACATCCATG------------------- 309
Query 361 TTTACAGTTAGAAAATTAGGAAAACAGTGGTTTAACTTGAATTCTCTCTTGACGGGTCCAGAATTAATATCAGA 434
Sbjct 310 -------------------------------------------------------------------------- 309
Query 435 TACATATCTTGCACTTTTCTTGGCTCAATTACAACAGGAAGGTTATTCTATATTTGTCGTTAAGGGTGATCTGC 508
Sbjct 310 -------------------------------------------------------------------------- 309
Query 509 CAGATTGCGAAGCTGACCAACTCCTGCAGATGATTAGGGTCCAACAGATGCATCGACCAAAACTTATTGGAGAA 582
Sbjct 310 -------------------------------------------------------------------------- 309
Query 583 GAATTAGCACAACTAAAAGAGCAAAGAGTCCATAAAACAGACCTGGAACGAGTGTTAGAAGCAAATGATGGCTC 656
Sbjct 310 -------------------------------------------------------------------------- 309
Query 657 AGGAATGTTAGACGAAGATGAGGAGGATTTGCAGAGGGCTCTGGCACTAAGTCGCCAAGAAATTGACATGGAAG 730
Sbjct 310 -------------------------------------------------------------------------- 309
Query 731 ATGAGGAAGCAGATCTCCGCAGGGCTATTCAGCTAAGTATGCAAGGTAGTTCCAGAAACATATCTCAAGATATG 804
Sbjct 310 -------------------------------------------------------------------------- 309
Query 805 ACACAGACATCAGGTACAAATCTTACTTCAGAAGAGCTTCGGAAGAGACGAGAAGCCTACTTTGAAAAACAGCA 878
Sbjct 310 -------------------------------------------------------------------------- 309
Query 879 GCAAAAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGGGGACCTAT 952
Sbjct 310 -------------------------------------------------------------------------- 309
Query 953 CAGGACAGAGTTCACATCCATGTGAAAGGCCAGCCACCAGTTCAGGAGCACTTGGGAGTGATCTAGGTGATGCT 1026
Sbjct 310 -------------------------------------------------------------------------- 309
Query 1027 ATGAGTGAAGAAGACATGCTTCAGGCAGCTGTGACCATGTCTTTAGAAACTGTCAGAAATGATTAGAAAACAAA 1100
Sbjct 310 -------------------------------------------------------------------------- 309
Query 1101 AGGAAAAAAA 1110
Sbjct 310 ---------- 309
