Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13930
- Subject:
- NR_026824.1
- Aligned Length:
- 1770
- Identities:
- 878
- Gaps:
- 794
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGAAGGAGGAAGGACAGCACAGCCTACAGCCGTGCTCAGGAAGTTTCTGGAACCTAGGCTCATCTCCACAGA 74
Query 1 -------------------------ATGGGGCCCCTCTCAGCCCCTCCCTGCACAGAGCACATCAAATGGAAGG 49
||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 75 GGAGAACACACAAGCAGCAGAGACCATGGGGCCCCTCTCAGCCCCTCCCTGCACACAGCACATCAAATGGAAGG 148
Query 50 GGCTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCTGCCCACCACTGCCCAAGTCACGATTGAAGCCCAG 123
||.||||||||||||||||||||||||||||||||||||..||.||||.||||||||||||||.||||||||||
Sbjct 149 GGGTCCTGCTCACAGCATCACTTTTAAACTTCTGGAACCCACCTACCATTGCCCAAGTCACGACTGAAGCCCAG 222
Query 124 CCACCAAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGCTACAT 197
|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 223 CCACCCAAAGTTTCCGAGGGGAAGGATGTTCTTCTACTTGTCCACAATTTGCCCCAGAATCTTACTGGTTACAT 296
Query 198 CTGGTACAAAGGGCAAATCAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAATAATTATAT 271
.|||||.|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||.|||||.||
Sbjct 297 GTGGTAGAAAGGGCAAATAAGGGACCTCTACCATTACATTACATCATATGTAGTAGACGGTCAAAGAATTACAT 370
Query 272 ATGGGCCTGCATATAGTGGACGAGAAACAGCATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 345
|||||||||||||.||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 ATGGGCCTGCATACAGTGGACGAGAAACAGTATATTCCAATGCATCCCTGCTGATCCAGAATGTCACCCGGGAG 444
Query 346 GACGCAGGATCCTACACCTTACACATCATAAAGCGAGGTGATGGGACTAGAGGAGTAACTGGATATTTCACCTT 419
||||.||.||||||||||||||||||||||.||||||||||||||||||||||||||||||||.||||||||||
Sbjct 445 GACGGAGTATCCTACACCTTACACATCATACAGCGAGGTGATGGGACTAGAGGAGTAACTGGAAATTTCACCTT 518
Query 420 CACCTTATACCTGGAGACT-CCCAAGCCCTCCATCTCCAGCAGCAACTTAAACCCCAGGGAGGCCATGGAAACT 492
|||||||||||.|.|| || ||||||||||.||||.|||.||.|||||.|||.|||||||||...|.||| |
Sbjct 519 CACCTTATACCCGAAG-CTGCCCAAGCCCTACATCACCATCAACAACTCAAAACCCAGGGAGAATAAGGA---T 588
Query 493 GTGAT---CTTAACCTGTGATCC------TGAG-ACTCCGGACACAAGCTACCAGTGGTGGATGAATGGTCAGA 556
||..| |||.||||||||.|| |||| ||| |||| ||||..|||||||.|.||||||||||
Sbjct 589 GTCTTACCCTTCACCTGTGACCCTAAAAGTGAGAACT----ACAC---CTACACGTGGTGGCTAAATGGTCAGA 655
Query 557 GCCTCCCTATGACTCACAGGTTTCAGCTGTCC----GAAACCAACAGGACCCTCTTTCTATTTGGTGTCAC--- 623
|||||||..|.|.||.||||.|..|| ||.|| ||| |||||||.||||.|||||....|||||||
Sbjct 656 GCCTCCCAGTCAGTCCCAGGGTAAAG-TGACCCATTGAA---AACAGGATCCTCATTCTACCCAGTGTCACGAG 725
Query 624 AAAGTATACTGCAGGACCCTATGAATGTGAAATACGGAACTCAGGGA----GTGCCAGCCGCAGTGACCCAGTC 693
|||..|.| |||||||||||.||||||||||||||.|| .|| |||.||.|||||||.||||||||
Sbjct 726 AAATGAAA---CAGGACCCTATCAATGTGAAATACGGGAC----CGATATGGTGGCATCCGCAGTAACCCAGTC 792
Query 694 ACCCTGAATCTCCTCCATGGTCCAGACCTCCCCAGAATTCACCCTTCATACACCAATTACCGTTCAGGAGATAA 767
|||||||||.|||||.|||||||||||||||||||||||.|||||||||.||||.||||||||||||||.|.||
Sbjct 793 ACCCTGAATGTCCTCTATGGTCCAGACCTCCCCAGAATTTACCCTTCATTCACCTATTACCGTTCAGGACAAAA 866
Query 768 CCTCTACTTGTCTTGCTTCGCGAACTCTAACCCACCGGCACAGTATTCTTGGACAATTAATGGGAAGTTTCAGC 841
|||.||||||||.|||||||||.|.|.|||||||||||||.||||.||||||||||||||||||||||||||||
Sbjct 867 CCTTTACTTGTCCTGCTTCGCGGAATGTAACCCACCGGCATAGTACTCTTGGACAATTAATGGGAAGTTTCAGC 940
Query 842 AATCAGGACAAAATCTGTTTATCCCCCAAATTACTACAAAGCATAGCGGGCTCTATGTTTGCTCTGTTCGTAAC 915
||||||.||||||.||.|||||||||||||||||||||||||||||.||||||||||.||||||||||||||||
Sbjct 941 AATCAGAACAAAAGCTCTTTATCCCCCAAATTACTACAAAGCATAGAGGGCTCTATGCTTGCTCTGTTCGTAAC 1014
Query 916 TCAGCCACTGGCGAGGAAAGCTCCACGTCGTTGACAGTCAAAGTCTCTG----CTTCTACAAGAATA------- 978
||||||||||||.||||||||||||..||..||||||||.||||||||| ||.| ||.|.|.|
Sbjct 1015 TCAGCCACTGGCAAGGAAAGCTCCAAATCCATGACAGTCGAAGTCTCTGGTGCCTGC--CATGGAGACCTGGCA 1086
Query 979 -GGACTTCTTCCT--CT-CCTTATCCAACA-------------------------------------------- 1004
||.||..|||.| || ||.| ||||
Sbjct 1087 GGGTCTCATTCGTGACTGCCAT----AACAGAGACACTGAGAAAAAGATGCAACCATGGAAAGGTGCAAAGGTG 1156
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1157 GCAAGTTCTAATGACATAGAAAATAGCAATCAGCCTTTCTCACATCTGAAAGCCTTCCAAAATATCTGAGTGCA 1230
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1231 GTAGAGAATTGACAGAGGACTGATCACCAACCTAGAAGTATGCTCCTCCAGGAATAGGACGTCTTCCTTTCTTT 1304
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1305 ACTCCAATAGAGCAGCGGTGATGTCATTTCTGTATTTCAGGAAGACTGGCAGGAGATTTATGGAAAAGACTCTG 1378
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1379 ACAAGGACTCTGGAATACAAGCTCCTGATAACTTCAAGATCATACCACTGGACTAAGAACTTTCAAAATTTTAA 1452
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1453 TGAACAGGCTGATACCTTCATGAAATTCAAGACAAAGAAGAAAAAAAACTCAATTTTATTGGAATAAATAATCA 1526
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1527 AAAGGATAATGTTTTCATAATTTTCTATTTGAAAATGTGCTGAGTCTTTGAATGTTTTATTCTCCAGATTTATG 1600
Query 1005 -------------------------------------------------------------------------- 1004
Sbjct 1601 AACTTTTTTCCTTGAACAATTGGTAAAGTATACTTTTGTAAACAAAAATTGAAACATTTGCTTTTGCTGAGTGC 1674
Query 1005 -------------------------------------------------------------------- 1004
Sbjct 1675 CCCAGAATTGGGAAACTATTCATGAGTATTCATATGTTTATGGTAATAAAGTTATTTGCACAACTTCA 1742
