Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_13995
- Subject:
- NM_007322.3
- Aligned Length:
- 1706
- Identities:
- 1159
- Gaps:
- 520
Alignment
Query 1 ATGGTGGACCTGGCGAACGAAGAAAAGCCTGCCATTGCTCCGCCCGTCTTTGTGTTTCAGAAGGATAAAGGACA 74
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGGACCTGGCGAACGAAGAAAAGCCTGCCATTGCTCCGCCCGTCTTTGTGTTTCAGAAGGATAAAGGACA 74
Query 75 AAA----------------------------------------------------------------------- 77
|||
Sbjct 75 AAAGTCCCCTGCAGAGCAAAAAAACTTGTCGGATTCGGGAGAGGAGCCTCGGGGGGAGGCTGAGGCCCCCCACC 148
Query 78 -------------------------------------------------------------------------- 77
Sbjct 149 ATGGCACGGGTCACCCCGAGTCAGCTGGCGAGCATGCCCTAGAACCTCCTGCCCCTGCTGGCGCCTCAGCCAGC 222
Query 78 -----------------------------------------------------------GAGGTCAGCTGGCGG 92
|||||||||||||||
Sbjct 223 ACTCCTCCGCCTCCCGCTCCTGAAGCCCAGCTTCCTCCTTTTCCGCGAGAACTGGCAGGGAGGTCAGCTGGCGG 296
Query 93 CTCCAGTCCTGAAGGCGGAGAAGATTCTGACAGAGAAGATGGAAATTACTGCCCTCCTGTCAAGCGAGAAAGAA 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CTCCAGTCCTGAAGGCGGAGAAGATTCTGACAGAGAAGATGGAAATTACTGCCCTCCTGTCAAGCGAGAAAGAA 370
Query 167 CATCCTCTTTAACCCAGTTCCCACCCTCACAGTCAGAGGAAAGGAGCAGTGGCTTCCGGTTGAAGCCACCAACG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CATCCTCTTTAACCCAGTTCCCACCCTCACAGTCAGAGGAAAGGAGCAGTGGCTTCCGGTTGAAGCCACCAACG 444
Query 241 CTGATCCACGGCCAAGCCCCCAGCGCAGGTCTGCCAAGCCAGAAGCCCAAGGAGCAGCAGCGGAGCGTGCTTCG 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 CTGATCCACGGCCAAGCCCCCAGCGCAGGTCTGCCAAGCCAGAAGCCCAAGGAGCAGCAGCGGAGCGTGCTTCG 518
Query 315 CCCGGCAGTGTTACAAGCTCCGCAGCCAAAGGCGCTGTCCCAGACTGTCCCCAGCAGTGGCACCAACGGGGTCA 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCGGCAGTGTTACAAGCTCCGCAGCCAAAGGCGCTGTCCCAGACTGTCCCCAGCAGTGGCACCAACGGGGTCA 592
Query 389 GCCTCCCAGCAGACTGCACGGGGGCAGTGCCCGCAGCATCCCCTGACACTGCTGCATGGAGAAGTCCTTCCGAA 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCCTCCCAGCAGACTGCACGGGGGCAGTGCCCGCAGCATCCCCTGACACTGCTGCATGGAGAAGTCCTTCCGAA 666
Query 463 GCTGCCGATGAGGTGTGTGCACTTGAGGAGAAAGAGCCCCAGAAAAATGAGTCCAGCAATGCCTCTGAAGAGGA 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GCTGCCGATGAGGTGTGTGCACTTGAGGAGAAAGAGCCCCAGAAAAATGAGTCCAGCAATGCCTCTGAAGAGGA 740
Query 537 AGCCTGTGAGAAAAAAGACCCCGCCACACAGCAAGCCTTTGTATTTGGGCAGAACTTGAGGGACAGAGTTAAGC 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AGCCTGTGAGAAAAAAGACCCCGCCACACAGCAAGCCTTTGTATTTGGGCAGAACTTGAGGGACAGAGTTAAGC 814
Query 611 TGATAAATGAGAGCGTGGACGAAGCCGACATGGAGAATGCTGGACACCCCAGCGCAGACACGCCAACCGCAACG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGATAAATGAGAGCGTGGACGAAGCCGACATGGAGAATGCTGGACACCCCAGCGCAGACACGCCAACCGCAACG 888
Query 685 AACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGACGCCTCCAGCAACAAATT 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AACTATTTCCTCCAGTATATCAGTTCCAGTTTAGAGAACTCAACCAATAGTGCCGACGCCTCCAGCAACAAATT 962
Query 759 TGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGGTCAGTTCAGATGCCAACA 832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTATTTGGCCAGAACATGAGCGAGCGAGTTTTGAGCCCCCCAAAATTAAACGAGGTCAGTTCAGATGCCAACA 1036
Query 833 GGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCTGAGAAAGAGTCCCTGGCT 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GGGAAAATGCAGCTGCCGAGTCAGGGTCTGAGTCCTCGTCCCAGGAGGCCACCCCTGAGAAAGAGTCCCTGGCT 1110
Query 907 GAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGTGGAAGTCATCACCGGGGA 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAGTCGGCAGCCGCCTACACCAAGGCAACAGCGCGGAAGTGTTTGTTGGAAAAAGTGGAAGTCATCACCGGGGA 1184
Query 981 GGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGACCTCACAGTCCT------ 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGAGGCGGAGAGCAATGTGTTACAGATGCAGTGCAAGCTGTTTGTCTTTGACAAGACCTCACAGTCCTGGGTGG 1258
Query 1049 ------------GGCTTCTCCG-----------------CCACC--------CACAC----------------- 1068
||||.|||.| ||||| |||||
Sbjct 1259 AGAGAGGCCGGGGGCTGCTCAGACTCAATGACATGGCGTCCACCGATGACGGCACACTACAGTCCCGACTAGTG 1332
Query 1069 -----------------CCT--------TCC----CACCCTGCTGTGGGGCCC----------------TGCCT 1097
||| ||| ||||..||||| |||||| .|||.
Sbjct 1333 ATGCGGACCCAGGGGAGCCTGCGACTGATCCTCAACACCAAGCTGT-GGGCCCAGATGCAGATCGACAAGGCCA 1405
Query 1098 TTGTGGGGAGCA---GC----CAGCCCTCTGCCCC--TGCCCAGGGC----------TCC---------CCAAC 1143
..|.|..||||| || |||||.|...|.|| .|.||||||| ||| |||.|
Sbjct 1406 GCGAGAAGAGCATTCGCATCACAGCCATGGACACCGAGGACCAGGGCGTGAAGGTCTTCCTGATCTCGGCCAGC 1479
Query 1144 T--------ATAGG------------------------------CCTGGGACCCCCGCCCA---GCTTGG---- 1172
| |.||| ||||| |||.||.|| ||.|||
Sbjct 1480 TCCAAGGACACAGGTCAGTTGTATGCAGCCCTGCACCACCGCATCCTGG---CCCTGCGCAGCCGCGTGGAGCA 1550
Query 1173 ----------------------------------GGGGCTGC----TCGTACGAGTG----------------- 1191
|||||.|| ||..||||| |
Sbjct 1551 GGAGCAGGAGGCCAAGATGCCCGCGCCTGAGCCTGGGGCAGCCCCATCCAACGAG-GAGGACGACAGCGACGAT 1623
Query 1192 -------------------------------------------------------------------------- 1191
Sbjct 1624 GACGATGTCCTGGCTCCTTCAGGGGCCACCGCAGCTGGTGCTGGTGACGAAGGGGACGGGCAGACGACCGGGAG 1697
Query 1192 ---- 1191
Sbjct 1698 CACA 1701
