Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14059
• Subject: NM_001142430.1
• Aligned Length: 866
• Identities: 591
• Gaps: 163

Alignment

Query   1  --------------------------------------------------------------------------  0
                                                                                     
Sbjct   1  ATGAGTTCCAGAAAGCAGGGTTCTCAACCTCGTGGACAGCAATCTGCAGAAGAAGAGAACTTCAAAAAACCAAC  74

Query   1  -------------------------ATGAGATGGGCTGCCCCAGGAAAGAAGACATCTGGTCTGCAACAGAAAA  49
                                    ||||||.||||..||.||||||||||||||.||||||..||.|||||||
Sbjct  75  TAGAAGCAACATGCAGAGAAGTAAAATGAGAGGGGCCTCCTCAGGAAAGAAGACAGCTGGTCCACAGCAGAAAA  148

Query  50  ATGTTGAA----------------------GT--------------------------------------GAAA  63
           ||.|||||                      ||                                      |||.
Sbjct 149  ATCTTGAACCAGCTCTCCCAGGAAGATGGGGTGGTCGCTCTGCAGAGAACCCCCCTTCAGGATCCGTGAGGAAG  222

Query  64  ACGAAAAAGAACAAACAGAAAACACCTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCG  137
           ||.|.|||||||||.|||||.||.||||||||.||||||||||||||||||||.||..|.||||||||.|||||
Sbjct 223  ACCAGAAAGAACAAGCAGAAGACTCCTGGAAACGGAGATGGTGGCAGTACCAGCGAAGCACCTCAGCCCCCTCG  296

Query 138  GAAGAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGAAACATTCATGAACAGAGTTGAAGTTAAAGTAA  211
           |||||||||||||||||.|||.||.||||||||||.||||||..|.||.|.|||.|||.|.||.||||||||.|
Sbjct 297  GAAGAAAAGGGCCCGGGCAGACCCCACTGTTGAAAGTGAGGAGGCGTTTAAGAATAGAATGGAGGTTAAAGTGA  370

Query 212  AGATTCCTGAAGAGCTAAAACCGTGGCTTGTTGATGACTGGGACTTAATTACCAGGCAAAAACAGCTCTTTTAT  285
           |||||||||||||..|||||||.|||||||||||.||||||||||||.||||||||||.||.|||||.|||.|.
Sbjct 371  AGATTCCTGAAGAATTAAAACCATGGCTTGTTGAGGACTGGGACTTAGTTACCAGGCAGAAGCAGCTGTTTCAA  444

Query 286  CTTCCTGCCAAGAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAGAAATCTCGTGGAAACACAGA  359
           ||.|||||||||||.|||||.|||.|.|||||.|||||.||||||||||.|||||||||.|..|||||....||
Sbjct 445  CTCCCTGCCAAGAAAAATGTAGATGCAATTCTGGAGGAGTATGCAAATTGCAAGAAATCGCAGGGAAATGTTGA  518

Query 360  TAATAAGGAGTATGCGGTTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAATGTTGGGTACCCAGC  433
           |||||||||.||||||||||||||||||||||||||.|||||||||||.|||||.||.||||||||.||.||||
Sbjct 519  TAATAAGGAATATGCGGTTAATGAAGTTGTGGCAGGAATAAAAGAATATTTCAATGTGATGTTGGGCACTCAGC  592

Query 434  TACTCTATAAATTTGAGAGACCACAGTATGCTGAAAT--TCTTGCAGATCATCCCGATGCACCCATGTCCCAGG  505
           |.|||||.|||||||||||.||.||||||||||||||  |||||  |.|||.||.|||||.||.||||||||||
Sbjct 593  TGCTCTACAAATTTGAGAGGCCCCAGTATGCTGAAATCCTCTTG--GCTCACCCTGATGCTCCAATGTCCCAGG  664

Query 506  TGTATGGAGCGCCACATCTCCTGAGATTATTTGTACGAATTGGAGCAATGTTGGCTTATACACCTCTGGATGAG  579
           |.||||||||.|||||.||.|||||||||||||||.|||||||||||||||||||.|||||.||.||.||||||
Sbjct 665  TTTATGGAGCACCACACCTACTGAGATTATTTGTAAGAATTGGAGCAATGTTGGCCTATACGCCCCTTGATGAG  738

Query 580  AAGAGCCTTGCTTTATTACTCAATTATCTTCACGATTTCCTAAAGTACCTGGCAAAGAATTCTGCAACTTTGTT  653
           ||.||||||||.|||||..|....|||.|.||.|||||||||||.||.||||||||||||||||||.||.|.||
Sbjct 739  AAAAGCCTTGCATTATTGTTGGGCTATTTGCATGATTTCCTAAAATATCTGGCAAAGAATTCTGCATCTCTCTT  812

Query 654  CAGTGCCAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAGCTGTG  705
           .|.||||||.|||||..||||||||.||.||||||||||.||.|||||..||
Sbjct 813  TACTGCCAGTGATTACAAAGTGGCTTCTGCTGAGTACCACCGCAAAGCCCTG  864