Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14082
- Subject:
- XM_006537850.3
- Aligned Length:
- 5366
- Identities:
- 1389
- Gaps:
- 3810
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAACTGCTGGTCCATCTGAATAAACGTATAAAAAGCCGCCCCAAAATACAGCTTCCAGTAGAAACACTATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACGAATTTTACTATAATTTATGTTAAGATGGGCTATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTCGCCTGCCAGTGGAAAAACAATGTGAGCTGGCCCCTACGCTTCTTACTGCCATGGAAGGGAAACCTCAGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGCAGGATAGCTTAATGCATCTTTTAATACCAACTCTTTTTCACATGAAGTACCCGGCTGAATCATCAAAGTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGCTTCTCCTTTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTCTTGGACTTTATGCTAGATGTCCTTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGATGCCTTACGGATATGTGTTAAATGAATCCCAGAGTCGCCAAAATTCATCATCATCATCACAGGGTTCTTCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAAACAGTGGGGGAGGTTCTGGAATCCCACAGCCTCCCCCAGGAATGAGCTTTTATGCAGCTAAACGAGTTAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGTGACAACCCGTGGACACCTGAACAGTTGGAACAGTGCAAATTGGGTATAGTGAAGTTCATAGAAGCTGAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGTGCCTGAACTTGAAGCTGTTCTCCACCTGGTGATTGCTTCTAGTGACACACGCCATAGTGTCGCGACAGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCAGACCTGGAGTTGAAAAGCAAGCAGAGCTTAATTGACTGGAATAACCCTGCCATCATTAATAAGATGTACAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGTGTACCTTGGGGATATACCACTGAAAACAAAAGAGGGAGCAGTTCTAAAGCCGGAGCTGAAAAGAGACCCAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCAGTACTAGAGTGAAGTTAAAGATTGTTCCTCATCTCCTGCGCTCTAGACAAGCTGCTGAAACGTTCCCAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AACATTCAGGTGGTATATGATGGACTTTTTGGTACAAATACAAACTCAAAGTTAAGAACACTGTCCCTGCAATT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGTACATCACATTTGTTTAACTTGCCCAGAAATCAAGATTAAACCACTAGGTCCTATGCTTTTGAATGGTCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTAAGCTAATAAATGAATATAAAGAGGACCCTAAACTACTGTCAATGGCATATTCAGCTGTTGGGAAACTCTCC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGTCGAATGCCCCATTTATTCACTAAGGATATAGCTCTTGTGCAGCAGCTCTTTGAAGCCCTCTGTAAGGAAGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACCGGAGACTCGGCTTGCTATTCAGGAAGCGTTATCTATGATGGTTGGAGCTTACAGTACCTTAGAAGGAGCAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAGAACTTTAATGGAGGCACTTGTAGCTTCATACTTAATAAAGCCTGAAGTTCAAGTTCGGCAAGTTGCAGTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAATTTGCCAGCACGGTGTTTCCCTCAGATCATATACCTTCCAGATACTTGCTCCTACTAGCTGCAGGAGACCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACGAGAAGAAGTCCATGGTGAAGCACAGCGCGTATTACGATGTCTTCCTGGTAGAAATAAAAAGGAAAGTGCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTAAGCAGATGCCATCTTTTCCAGAAATGGTATATTACATTCAAGAAAAGGCTTCCCATCGAATGAAAACTCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTCAAATATATGACCGGAACCACAGTCCTTCCATTTAATCCAGCAGCATTTGGAGAGATAGTTCTGTACTTGCG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CATGTGCCTGGCTCATAGTGCAGGGGTGGTACCCACTTCCCAGAGTTTGGCTGATATGCAAGATCATGCTCCGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTATTGGACGGTACATACGGGCTTTGATGTCAAGCAGCCAGGCGACAGCTTCATCTTCTAATAAGAGTGGAGAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ACCAACCCTGTTCAGATCTACACTGGCCTGCTTCAACAGCTGCTAGCGGGGGTTGGAGGTTTGCCAGTCATGTA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAATTGGCTACCAAATTTGTAGACAAAACAGAATGGATCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGAGTCTGATGAGTAGCAGTAAAGAAGAAATGCGTGAATTGGCGGCTTTGTTTTATTCTGTGGTTGTGTCTACA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGTCCGGAATTGAGTTAAAGTCAATGATAGAACAGCTGATAAAGGCCACAAAAGACAATCATAGCCCTGAGGT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCAACATGGATCGTTGCTTGCCTTGGGATTCACTGTTGGAAGATACTTGGCTAAGAAGAGAGTGAGGATGGCCG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AGCAGCATGACCTAGAGACAGATGCTGACCTCTTGCCTGAGCAAGAGGAGATCATTCGGAGTGCTACAGAAACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ATAGGTTCATTTTTAGACAGTACATCACCTCTGTTAGCAATTGCTGCCTGTACAGCCTTGGGTGAAATCGGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAATGGTCCTCTTCCGATCCCCAGTGAAGGGTCTGGATTTACTAAACTGCACCTCGTAGAAAGCTTACTCAATA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GAATTCCGTCTAGTAAAGAAACAAACAAGATGAAAGAACGAGCAATCCAAACACTGGGCTATTTTCCTGTTGGA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GATGGGGTTTTTCCCCACCAGAAACTCCTTTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAGATTGAGCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCAGTTCACTATTGGTGAAGCCATTACCAGTGCTGCAATAGGAACTAACTCTGTGGCTGCCCGAGATGCCTGGC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TGGTGACTGAAGAAGAATATATACCTCCTGCTGGTGCCAAAGTGAATGATGTTGTCCCATGGGTTTTAGATGTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATTTTAAATAAACATATCATCAGCCCCAACCCACATGTCAGGCAAGCAGCCTGCATCTGGCTTCTTTCTCTTGT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAGAAAACTAAGTACCCACAGAGAAGTGAAGTCCCATCTTAAAGAAATTCAGAGCGCATTTGTTTCAGTTCTGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGAAAATGATGAACTCAGCCAAGATGTTGCCTCAAAGGGGCTTGGGTTGGTTTATGAGCTGGGCAATGAACAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GATCAACAAGAATTGGTGTCTACACTTGTAGAAACACTTATGACTGGCAAAAGAGTCAAACATGAAGTTTCTGG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGAGACAGTGGTATTTCAAGGGGGTGGCCTTGGCAAAACACCTGATGGTCAGGGCCTTTCTACTTACAAGGAGC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTTGCTCTCTGGCAAGTGATCTCAGTCAGCCAGATCTGGTATATAAATTTATGAATCTGGCAAATCATCATGCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATGTGGAACTCCAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCAGAGCTGGAGAACAACTGGCTCC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTTTCTGCCTCAACTAGTTCCTCGCCTTTATCGATACCAGTTTGATCCCAACCTTGGAATTCGACAAGCTATGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAAGCATTTGGAATGCATTGGTCACTGACAAGTCAATGGTGGATAAATATTTGAAGGAAATTCTTCAAGATTTG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ATTAAAAACCTTACCAGCAACATGTGGAGAGTTCGAGAATCCAGCTGTTTAGCTCTGAATGATTTATTGAGAGG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAGACCTTTAGATGACGTCATTGACAAACTTCCAGAAATGTGGGAAACACTTTTTAGAGTACAAGATGATATTA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AGGAGTCTGTACGGAAGGCAGCAGAACTGGCTCTGAAAACTCTGAGCAAGGTTTGTGTGAAAATGTGTGACCCT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GCCAAAGGAGCAGCTGGCCAGAGAACCATTGCTGTCCTCCTGCCCTGCCTTCTGGACAAAGGAATGATGAGTCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGTGACGGAAGTCCGAGCCCTCAGCATTAACACTCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAAC 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CACACGCACCCAAACTCATACCAGCACTCTTAGAGTCCTTAAGTGTGTTGGAGCCTCAAGTTCTCAATTATTTG 3774
Query 1 ---------------------------------ATGGATAGTGCTCGGCTTAGTGCTGCCAAATCTTCTCCAAT 41
|||||.||||||||.||.||||||||||||||.|||||.||
Sbjct 3775 AGTCTCCGGGCTACAGAACAAGAAAAGGATGTAATGGACAGTGCTCGACTCAGTGCTGCCAAATCCTCTCCCAT 3848
Query 42 GATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCTGGGCGAGCTAGTTCCTAGGTTGTGTG 115
||||||.|||||||||||||||||||||||.||||||||.||.|||||.||.||.||||||||||||.|.||||
Sbjct 3849 GATGGAGACAATCAACATGTGCCTGCAATATCTTGATGTTTCGGTGCTAGGTGAACTAGTTCCTAGGCTATGTG 3922
Query 116 AACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCAGTGTCATTGTGTCATTAACTACTCAG 189
|.||||||||||||||||||||||||||.||||||||.|||||||||||||||||.|||||.||||||||||||
Sbjct 3923 AGCTGATCAGAAGTGGTGTAGGTCTTGGGACTAAGGGGGGCTGTGCCAGTGTCATCGTGTCTTTAACTACTCAG 3996
Query 190 TGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTGAGTGGCCTGACAGATCGGAACAG 263
|||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||.|||||||||||||||||
Sbjct 3997 TGTCCCCAGGACCTGACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTTAGTGGTCTGACAGATCGGAACAG 4070
Query 264 TGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTCACGGGATAGCAGCACTGAAAAAC 337
|||.|||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 4071 TGTAATTCAGAAATCCTGTGCATTTGCCATGGGCCATTTAGTTCGGACTTCACGGGATAGCAGCACTGAGAAAC 4144
Query 338 TCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCTACAAGACCTCTTGTGCTTTGACTATT 411
|.||.||||||||||||||.|||||.|||||||||||.||||||.||||.|||||.||||||||||||||.|||
Sbjct 4145 TGCTACAGAAGCTCAATGGCTGGTACATGGAGAAAGATGAACCTGTCTATAAGACGTCTTGTGCTTTGACAATT 4218
Query 412 CATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTCTGGCATTTTTAGG 485
|||||.||||||.||||||||||.||||||||.|||||.|||||.||||||||.|||||..|.||||||.||||
Sbjct 4219 CATGCAATTGGAAGATACAGCCCAGATGTATTGAAGAACCATGCTAAAGAAGTTCTGCCCTTAGCATTTCTAGG 4292
Query 486 CATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAATTTATGGACCGAAGTGTGGCAGGAAA 559
||||||||||||||||||||||||||||||.|||||||||||.||||||.|.|||||.||||||||||||||||
Sbjct 4293 CATGCATGAAATTGCTGATGAGGAGAAATCTGAAAAAGAAGAGTGTAATATGTGGACTGAAGTGTGGCAGGAAA 4366
Query 560 ACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTACTATTACCCAGAAGGCTTTGCAG 633
|.||||||||.||||||||.||.||||||||.|||||||||||.||.|||||||||||||||||||||||.||.
Sbjct 4367 ATGTACCTGGCTCCTTTGGAGGTATTCGATTGTACCTGCAGGAATTGATTACTATTACCCAGAAGGCTTTACAA 4440
Query 634 TCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAAAACAGACTAGCTCTCTAGT 707
||.||.||.|||||||||||||||||||||||||||||.||||||||||||.|||||||.||.||||||||.||
Sbjct 4441 TCACAATCTTGGAAAATGAAAGCCCAGGGTGCAATTGCTATGGCATCAATTTCAAAACAAACAAGCTCTCTTGT 4514
Query 708 ACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAAGGAGG 781
||||||.||.||.||.|||||.||||..||||||.||||||||||||||||||||||.||||||||||||||.|
Sbjct 4515 ACCTCCTTACCTGGGGATGATCCTGAGTGCATTGATGCAAGGCCTGGCTGGAAGAACATGGGCAGGAAAGGAAG 4588
Query 782 AGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATCAACCC 855
|.|||||||||||||||||||||||.|||||.|||||||||.|||||.||||||||||||||||||||||||||
Sbjct 4589 AACTATTGAAAGCCATTGCCTGTGTAGTGACGGCTTGCAGTACAGAGTTGGAAAAGTCTGTGCCCAATCAACCC 4662
Query 856 AGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATTGTAGCAAT 929
|.||||||||||||||||||.|||||..|||||||.|||.|||||||||||.|||||||.||||||||.|||||
Sbjct 4663 ACCACAAATGAAATTCTTCAGGCTGTCTTGAAGGAGTGTTGCAAAGAGAATCTCAAATATAAGATTGTTGCAAT 4736
Query 930 CAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAGTTCTCTAACATTGTCATACCTC 1003
||||||||||||||||.|.|||||.|||||||||||.|||||||||||||||||.|||.|||||||||||||.|
Sbjct 4737 CAGCTGTGCAGCTGATGTTTTGAAAGCCACCAAAGAAGACAGATTCCAGGAGTTTTCTGACATTGTCATACCCC 4810
Query 1004 TCATCAAGAAGAACTCACTTGAAAGCAGTGGG-GTCCGGACAACCAAAAATGAAGAGGAGAATGAAAAGGAAAA 1076
|||||||||||||||||||||||||.| |||| |||||.||.||||||..||||||.||.|||||.|||||||.
Sbjct 4811 TCATCAAGAAGAACTCACTTGAAAGTA-TGGGAGTCCGTACCACCAAAGCTGAAGATGAAAATGAGAAGGAAAG 4883
Query 1077 GGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAACGCGGAGACCC 1150
.|||||.||||||||.|.|||.|||||.||||||||.||||||||||||||.|||||..|.|||.|.||.||||
Sbjct 4884 AGAGCTGCAGCTGGAGTCTCTACTGGGCGCCTTTGAGAGCCTGGGCAAAGCATGGCCCAGGAACCCAGACACCC 4957
Query 1151 AACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCAGCTA 1224
|||||||||||||.||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||||||
Sbjct 4958 AACGTTGTTATCGGCAGGAGCTGTGCAAACTGATGTGTGAGCGGCTAAGACTCAGCACGTGGAAAGTGCAGCTA 5031
Query 1225 GGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAGAAGAACATGCCGATCCTGAGGC 1298
||.|||||.||.||||||||.||||||||.|||||||||||||||.|||||||.|||||.||.||||||||.||
Sbjct 5032 GGTGTCCTCCAGTCAATGAACGCCTTTTTCCAGGGGTTAATGCTTCTGGAAGAGGAACACGCAGATCCTGAAGC 5105
Query 1299 TTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAAAATAAGACCTACTCATCTGTGA 1372
|.|||||||.|||||.||.|||||.||.||||||||.||.||.|||||||||||||||||||||||||||||||
Sbjct 5106 TCTGGCTGAGATTCTTCTCGAAACATGCAAATCAATTACTTACTCTTTAGAAAATAAGACCTACTCATCTGTGA 5179
Query 1373 GAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATCTAAACAGTGGGAATGTTTGACA 1446
||||||||||||||||||||.|||||||.|||||||||||||||||||||.|||||||.||||||.||||||||
Sbjct 5180 GAACAGAAGCTTTATCTGTGGTAGAATTACTGCTTAAAAAACTTGAAGAAGCTAAACAATGGGAAAGTTTGACA 5253
Query 1447 TCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACAGCAGACCTGAACTGCAGGAGAA 1520
.|.||||||||||..||.||.||||||||||||||||||||||||.||||||.||||||.||.|||||||||||
Sbjct 5254 GCAGAATGCAGAGGACTTCTGATTGAGTCTTTAGCTACTATGGAGACAGACAACAGACCAGAGCTGCAGGAGAA 5327
Query 1521 AGCAGCGTTACTGAAGANAAACACTTGAAAATCTGGAA 1558
|||..|..||.|||||| ||||||||||||.|||||||
Sbjct 5328 AGCCTCAGTATTGAAGA-AAACACTTGAAAGTCTGGAA 5364
