Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14082
- Subject:
- XM_011250007.2
- Aligned Length:
- 5018
- Identities:
- 1389
- Gaps:
- 3462
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGACTCCCTTTTATATTTCTTCTTGGGGTTTTAAAATTGGCATTAAGAATTTTATTCTGGATTTAAACAGGAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACAGATGTTCTCTGAGCAGCTTTTAAAAATGACTGGTGCTCTACAGAGAAGGTGCCTCCCTGTGTCTGTCATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCACCTCAGGGAAGAACAGAAATCAGTATGTAATTATTTTGGAATTCAAGCAACATGGTGCAAATTGGGTATA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGAAGTTCATAGAAGCTGAGCAGGTGCCTGAACTTGAAGCTGTTCTCCACCTGGTGATTGCTTCTAGTGACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACGCCATAGTGTCGCGACAGCCGCAGACCTGGAGTTGAAAAGCAAGCAGAGCTTAATTGACTGGAATAACCCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATCATTAATAAGATGTACAAGGTGTACCTTGGGGATATACCACTGAAAACAAAAGAGGGAGCAGTTCTAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCGGAGCTGAAAAGAGACCCAGTCAGTACTAGAGTGAAGTTAAAGATTGTTCCTCATCTCCTGCGCTCTAGACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCTGCTGAAACGTTCCCAGCTAACATTCAGGTGGTATATGATGGACTTTTTGGTACAAATACAAACTCAAAGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAAGAACACTGTCCCTGCAATTTGTACATCACATTTGTTTAACTTGCCCAGAAATCAAGATTAAACCACTAGGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTATGCTTTTGAATGGTCTCACTAAGCTAATAAATGAATATAAAGAGGACCCTAAACTACTGTCAATGGCATA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCAGCTGTTGGGAAACTCTCCAGTCGAATGCCCCATTTATTCACTAAGGATATAGCTCTTGTGCAGCAGCTCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGAAGCCCTCTGTAAGGAAGAACCGGAGACTCGGCTTGCTATTCAGGAAGCGTTATCTATGATGGTTGGAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACAGTACCTTAGAAGGAGCACAGAGAACTTTAATGGAGGCACTTGTAGCTTCATACTTAATAAAGCCTGAAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCAAGTTCGGCAAGTTGCAGTGAAATTTGCCAGCACGGTGTTTCCCTCAGATCATATACCTTCCAGATACTTGC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCCTACTAGCTGCAGGAGACCCACGAGAAGAAGTCCATGGTGAAGCACAGCGCGTATTACGATGTCTTCCTGGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGAAATAAAAAGGAAAGTGCTTCTAAGCAGATGCCATCTTTTCCAGAAATGGTATATTACATTCAAGAAAAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTCCCATCGAATGAAAACTCCAGTCAAATATATGACCGGAACCACAGTCCTTCCATTTAATCCAGCAGCATTTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GAGAGATAGTTCTGTACTTGCGCATGTGCCTGGCTCATAGTGCAGGGGTGGTACCCACTTCCCAGAGTTTGGCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GATATGCAAGATCATGCTCCGGCTATTGGACGGTACATACGGGCTTTGATGTCAAGCAGCCAGGCGACAGCTTC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ATCTTCTAATAAGAGTGGAGAAACCAACCCTGTTCAGATCTACACTGGCCTGCTTCAACAGCTGCTAGCGGGGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTGGAGGTTTGCCAGTCATGTACTGTCTATTGGAAGCTGTGTCAGTGTATCCAGAAAAATTGGCTACCAAATTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTAGACAAAACAGAATGGATCAAGAGTCTGATGAGTAGCAGTAAAGAAGAAATGCGTGAATTGGCGGCTTTGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TTATTCTGTGGTTGTGTCTACAGTGTCCGGAATTGAGTTAAAGTCAATGATAGAACAGCTGATAAAGGCCACAA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGACAATCATAGCCCTGAGGTTCAACATGGATCGTTGCTTGCCTTGGGATTCACTGTTGGAAGATACTTGGCT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAGAAGAGAGTGAGGATGGCCGAGCAGCATGACCTAGAGACAGATGCTGACCTCTTGCCTGAGCAAGAGGAGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CATTCGGAGTGCTACAGAAACAATAGGTTCATTTTTAGACAGTACATCACCTCTGTTAGCAATTGCTGCCTGTA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGCCTTGGGTGAAATCGGCAGAAATGGTCCTCTTCCGATCCCCAGTGAAGGGTCTGGATTTACTAAACTGCAC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTCGTAGAAAGCTTACTCAATAGAATTCCGTCTAGTAAAGAAACAAACAAGATGAAAGAACGAGCAATCCAAAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 ACTGGGCTATTTTCCTGTTGGAGATGGGGTTTTTCCCCACCAGAAACTCCTTTTGCAAGGTCTGATGGATTCTG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGGAGGCCAAGCAGATTGAGCTTCAGTTCACTATTGGTGAAGCCATTACCAGTGCTGCAATAGGAACTAACTCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GTGGCTGCCCGAGATGCCTGGCTGGTGACTGAAGAAGAATATATACCTCCTGCTGGTGCCAAAGTGAATGATGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTCCCATGGGTTTTAGATGTTATTTTAAATAAACATATCATCAGCCCCAACCCACATGTCAGGCAAGCAGCCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GCATCTGGCTTCTTTCTCTTGTGAGAAAACTAAGTACCCACAGAGAAGTGAAGTCCCATCTTAAAGAAATTCAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGCGCATTTGTTTCAGTTCTGTCAGAAAATGATGAACTCAGCCAAGATGTTGCCTCAAAGGGGCTTGGGTTGGT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTATGAGCTGGGCAATGAACAAGATCAACAAGAATTGGTGTCTACACTTGTAGAAACACTTATGACTGGCAAAA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GAGTCAAACATGAAGTTTCTGGAGAGACAGTGGTATTTCAAGGGGGTGGCCTTGGCAAAACACCTGATGGTCAG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 GGCCTTTCTACTTACAAGGAGCTTTGCTCTCTGGCAAGTGATCTCAGTCAGCCAGATCTGGTATATAAATTTAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GAATCTGGCAAATCATCATGCAATGTGGAACTCCAGGAAGGGTGCTGCTTTTGGTTTTAATGTAATTGCTACCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GAGCTGGAGAACAACTGGCTCCTTTTCTGCCTCAACTAGTTCCTCGCCTTTATCGATACCAGTTTGATCCCAAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CTTGGAATTCGACAAGCTATGACAAGCATTTGGAATGCATTGGTCACTGACAAGTCAATGGTGGATAAATATTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAAGGAAATTCTTCAAGATTTGATTAAAAACCTTACCAGCAACATGTGGAGAGTTCGAGAATCCAGCTGTTTAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CTCTGAATGATTTATTGAGAGGAAGACCTTTAGATGACGTCATTGACAAACTTCCAGAAATGTGGGAAACACTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTTAGAGTACAAGATGATATTAAGGAGTCTGTACGGAAGGCAGCAGAACTGGCTCTGAAAACTCTGAGCAAGGT 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATTGCTGTCCTCCTGCCCTGCCTTC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 TGGACAAAGGAATGATGAGTCCTGTGACGGAAGTCCGAGCCCTCAGCATTAACACTCTTGTGAAGATCAGCAAA 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGTGCAGGAGCCATGTTGAAACCACACGCACCCAAACTCATACCAGCACTCTTAGAGTCCTTAAGTGTGTTGGA 3404
Query 1 -------------------------------------------------------ATGGATAGTGCTCGGCTTA 19
|||||.||||||||.||.|
Sbjct 3405 GCCTCAAGTTCTCAATTATTTGAGTCTCCGGGCTACAGAACAAGAAAAGGATGTAATGGACAGTGCTCGACTCA 3478
Query 20 GTGCTGCCAAATCTTCTCCAATGATGGAAACAATCAACATGTGCCTGCAATACCTTGATGTGTCAGTGCTGGGC 93
|||||||||||||.|||||.||||||||.|||||||||||||||||||||||.||||||||.||.|||||.||.
Sbjct 3479 GTGCTGCCAAATCCTCTCCCATGATGGAGACAATCAACATGTGCCTGCAATATCTTGATGTTTCGGTGCTAGGT 3552
Query 94 GAGCTAGTTCCTAGGTTGTGTGAACTGATCAGAAGTGGTGTAGGTCTTGGAACTAAGGGTGGCTGTGCCAGTGT 167
||.||||||||||||.|.|||||.||||||||||||||||||||||||||.||||||||.||||||||||||||
Sbjct 3553 GAACTAGTTCCTAGGCTATGTGAGCTGATCAGAAGTGGTGTAGGTCTTGGGACTAAGGGGGGCTGTGCCAGTGT 3626
Query 168 CATTGTGTCATTAACTACTCAGTGTCCTCAGGACCTAACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTGA 241
|||.|||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|
Sbjct 3627 CATCGTGTCTTTAACTACTCAGTGTCCCCAGGACCTGACACCTTACTCAGGTAAACTTATGAGTGCTTTGCTTA 3700
Query 242 GTGGCCTGACAGATCGGAACAGTGTGATTCAGAAATCTTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTCA 315
||||.||||||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||||||||.|||
Sbjct 3701 GTGGTCTGACAGATCGGAACAGTGTAATTCAGAAATCCTGTGCATTTGCCATGGGCCATTTAGTTCGGACTTCA 3774
Query 316 CGGGATAGCAGCACTGAAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACCTATCTACAA 389
|||||||||||||||||.|||||.||.||||||||||||||.|||||.|||||||||||.||||||.||||.||
Sbjct 3775 CGGGATAGCAGCACTGAGAAACTGCTACAGAAGCTCAATGGCTGGTACATGGAGAAAGATGAACCTGTCTATAA 3848
Query 390 GACCTCTTGTGCTTTGACTATTCATGCTATTGGACGATACAGCCCTGATGTATTAAAGAATCATGCAAAAGAAG 463
|||.||||||||||||||.||||||||.||||||.||||||||||.||||||||.|||||.|||||.|||||||
Sbjct 3849 GACGTCTTGTGCTTTGACAATTCATGCAATTGGAAGATACAGCCCAGATGTATTGAAGAACCATGCTAAAGAAG 3922
Query 464 TCCTGCCTCTGGCATTTTTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGAATGTAATTTA 537
|.|||||..|.||||||.||||||||||||||||||||||||||||||||||.|||||||||||.||||||.|.
Sbjct 3923 TTCTGCCCTTAGCATTTCTAGGCATGCATGAAATTGCTGATGAGGAGAAATCTGAAAAAGAAGAGTGTAATATG 3996
Query 538 TGGACCGAAGTGTGGCAGGAAAACGTACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTAC 611
|||||.|||||||||||||||||.||||||||.||||||||.||.||||||||.|||||||||||.||.|||||
Sbjct 3997 TGGACTGAAGTGTGGCAGGAAAATGTACCTGGCTCCTTTGGAGGTATTCGATTGTACCTGCAGGAATTGATTAC 4070
Query 612 TATTACCCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAATTG 685
||||||||||||||||||.||.||.||.||.|||||||||||||||||||||||||||||.||||||||||||.
Sbjct 4071 TATTACCCAGAAGGCTTTACAATCACAATCTTGGAAAATGAAAGCCCAGGGTGCAATTGCTATGGCATCAATTT 4144
Query 686 CAAAACAGACTAGCTCTCTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGA 759
|||||||.||.||||||||.||||||||.||.||.||.|||||.||||..||||||.|||||||||||||||||
Sbjct 4145 CAAAACAAACAAGCTCTCTTGTACCTCCTTACCTGGGGATGATCCTGAGTGCATTGATGCAAGGCCTGGCTGGA 4218
Query 760 AGAACGTGGGCAGGAAAGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGA 833
|||||.||||||||||||||.||.|||||||||||||||||||||||.|||||.|||||||||.|||||.||||
Sbjct 4219 AGAACATGGGCAGGAAAGGAAGAACTATTGAAAGCCATTGCCTGTGTAGTGACGGCTTGCAGTACAGAGTTGGA 4292
Query 834 AAAGTCTGTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATG 907
|||||||||||||||||||||||.||||||||||||||||||.|||||..|||||||.|||.|||||||||||.
Sbjct 4293 AAAGTCTGTGCCCAATCAACCCACCACAAATGAAATTCTTCAGGCTGTCTTGAAGGAGTGTTGCAAAGAGAATC 4366
Query 908 TCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAG 981
|||||||.||||||||.|||||||||||||||||||||.|.|||||.|||||||||||.|||||||||||||||
Sbjct 4367 TCAAATATAAGATTGTTGCAATCAGCTGTGCAGCTGATGTTTTGAAAGCCACCAAAGAAGACAGATTCCAGGAG 4440
Query 982 TTCTCTAACATTGTCATACCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGG-GTCCGGACAACCAAAAATG 1054
||.|||.|||||||||||||.||||||||||||||||||||||||||.| |||| |||||.||.||||||..||
Sbjct 4441 TTTTCTGACATTGTCATACCCCTCATCAAGAAGAACTCACTTGAAAGTA-TGGGAGTCCGTACCACCAAAGCTG 4513
Query 1055 AAGAGGAGAATGAAAAGGAAAAGGAGCTCCAGCTGGAATATCTGCTGGGTGCCTTTGAAAGCCTGGGCAAAGCC 1128
||||.||.|||||.|||||||..|||||.||||||||.|.|||.|||||.||||||||.||||||||||||||.
Sbjct 4514 AAGATGAAAATGAGAAGGAAAGAGAGCTGCAGCTGGAGTCTCTACTGGGCGCCTTTGAGAGCCTGGGCAAAGCA 4587
Query 1129 TGGCCGCGAAACGCGGAGACCCAACGTTGTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACT 1202
|||||..|.|||.|.||.|||||||||||||||||.||||||||||||||||||||||||||.|||||||.|||
Sbjct 4588 TGGCCCAGGAACCCAGACACCCAACGTTGTTATCGGCAGGAGCTGTGCAAACTGATGTGTGAGCGGCTAAGACT 4661
Query 1203 CAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCAATCAATGAATGCCTTTTTTCAGGGGTTAATGCTTTTGGAAG 1276
||||||||||||||||||||||||.|||||.||.||||||||.||||||||.|||||||||||||||.||||||
Sbjct 4662 CAGCACGTGGAAAGTGCAGCTAGGTGTCCTCCAGTCAATGAACGCCTTTTTCCAGGGGTTAATGCTTCTGGAAG 4735
Query 1277 AAGAACATGCCGATCCTGAGGCTTTGGCTGAAATTCTGCTTGAAACTTGTAAATCAATCACATATTCTTTAGAA 1350
|.|||||.||.||||||||.|||.|||||||.|||||.||.|||||.||.||||||||.||.||.|||||||||
Sbjct 4736 AGGAACACGCAGATCCTGAAGCTCTGGCTGAGATTCTTCTCGAAACATGCAAATCAATTACTTACTCTTTAGAA 4809
Query 1351 AATAAGACCTACTCATCTGTGAGAACAGAAGCTTTATCTGTGATAGAATTGCTGCTTAAAAAACTTGAAGAATC 1424
||||||||||||||||||||||||||||||||||||||||||.|||||||.|||||||||||||||||||||.|
Sbjct 4810 AATAAGACCTACTCATCTGTGAGAACAGAAGCTTTATCTGTGGTAGAATTACTGCTTAAAAAACTTGAAGAAGC 4883
Query 1425 TAAACAGTGGGAATGTTTGACATCTGAATGCAGAGTGCTCCTAATTGAGTCTTTAGCTACTATGGAGCCAGACA 1498
||||||.||||||.||||||||.|.||||||||||..||.||.||||||||||||||||||||||||.||||||
Sbjct 4884 TAAACAATGGGAAAGTTTGACAGCAGAATGCAGAGGACTTCTGATTGAGTCTTTAGCTACTATGGAGACAGACA 4957
Query 1499 GCAGACCTGAACTGCAGGAGAAAGCAGCGTTACTGAAGANAAACACTTGAAAATCTGGAA 1558
.||||||.||.||||||||||||||..|..||.|||||| ||||||||||||.|||||||
Sbjct 4958 ACAGACCAGAGCTGCAGGAGAAAGCCTCAGTATTGAAGA-AAACACTTGAAAGTCTGGAA 5016
