Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14087
- Subject:
- NR_135127.1
- Aligned Length:
- 2345
- Identities:
- 497
- Gaps:
- 1844
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGAAGAATTTGGCGCCATCTTGAGAAGGTCAAAGTGATTCTTCGATTAAATGCCTTACTTATCGCCTAGTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GACCTGGCGCTTGGGTTTACTCTCCCCAGCAACTGCGCCTCAAACGCAAAGAAAACTGCAGGTCCTCGGGGAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GATCGATTTCACCATTCAAGAGAAAAATCCATTTCCCAGATTCCTCCCCTTTATGTAAACGTCTGGTACCTAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACGTTAAATACACGTGAGTTTTCCGGTTTTATAAGATCACATACTGCAAACCAACAGTAAATTACATTAATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCATTTCTTTAGAAATTCTTAATTGCTAGGCACTGACATATAAATTGAGTTTGCTGTTGTTTTAGAGAGAAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATAGACATATTCATTTTTTTTCAATCAGGACATGGTATTCGTTTCCTTCTTAAGCTTCCCATTTTTGAGGTAGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGTATTGGTGTGTGTCTCTATCTCTACCTTGCTCCCTCATTAGCAGGCTTAATGGGCAGGAATTATGTCTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTTGCTTTCCGTTGGATCCCCGGGTCTAGTAGAGCGCCTTGACACATAGTAGGTACTCGACACAGATGCTGGCT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCATGATGAAGCAATTGTCCTCGAATTAATACAAAAGGGAAGATTCAGACTCAGCGAGCCGGTACCATTCGTCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGGGACACACAGCCAGGAAGGAACCGAACCAGGATTCTAACCCAGGATTACCCAAGTTCGAATTCTAATTGAAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATAAGTCCTTAGCGACCTTGGACGGACTTACTAAACTGCCCTGAATCTCGGCTTCCTTAGCTGCAAAATAGGGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGGAAAAGTGGACTCGGTGCTCCTCTGCGCCGCATTCCCGCAGCGGGATTTGTGAAAGCGAACTTGAGCCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CACTGCAGAAGCCCTGAGGTCCTGTCTCAACCAGAATCCAGCACCCAGGACAAGCCCTCCAGCGACTTCAGACC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTCCCGCTCCCGACCCCGCCCGCCCCCGAGAGGCGTGGTCAAGGCGGGGCCAGAAGGCGGACGCGTGCACGGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGTAAAGCGCAGGCGCAAAGCTTCGGTGACGTCAGAGAGGCGCGCTCCCAGCTCGGAGCCGACTCGCAGACGC 1110
Query 1 --------------------------------------------------ATGGCGGCGGCTGGGGCTGGCCGT 24
||||||||||||||||||..||||
Sbjct 1111 GCCCCGCCCCTCGGCGTCGCTCTGGACTGGCGCAGGCGCAAGCCGGCAAGATGGCGGCGGCTGGGGCTTTCCGT 1184
Query 25 CTGAGGCGGGTGGCATCGGCTCTGCTGCTGCGGAGCCCCCGCCTGCCCGCCCGGGAGCTGTCGGCCCCGGCCCG 98
||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGAGGCGGGCGGCATCGGCTCTGCTGCTGCGGAGCCCCCGCCTGCCCGCCCGGGAGCTGTCGGCCCCGGCCCG 1258
Query 99 ACTCTATCACAAGA------------------------------------------------------------ 112
||||||||||||||
Sbjct 1259 ACTCTATCACAAGAAGGTATCTCAAATCTGTGAAGTATTGTAGAGGAGACACAAAAGGAATTGGGGGTCACAAA 1332
Query 113 ------------------------------------AGGTTGTTGATCATTATGAAAATCCTAGAAACGTGGGG 150
||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TGGTTCTCATTGACATGAGTGTAGACCTTTCTACTCAGGTTGTTGATCATTATGAAAATCCTAGAAACGTGGGG 1406
Query 151 TCCCTTGACAAGACATCTAAAAATGTTGGAACTGGACTGGTGGGGGCTCCAGCATGTGGTGACGTAATGAAATT 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TCCCTTGACAAGACATCTAAAAATGTTGGAACTGGACTGGTGGGGGCTCCAGCATGTGGTGACGTAATGAAATT 1480
Query 225 ACAGATTCAAGTGGATGAAAAGGGGAAGATTGTGGATGCTAGGTTTAAAACATTTGGCTGTGGTTCCGCAATTG 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACAGATTCAAGTGGATGAAAAGGGGAAGATTGTGGATGCTAGGTTTAAAACATTTGGCTGTGGTTCCGCAATTG 1554
Query 299 CCTCCAGCTCATTAGCCACTGAATGGGTGAAAGGAAAGACGGTGGAGGAAGCCTTGACTATCAAAAACACAGAT 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTCCAGCTCATTAGCCACTGAATGGGTGAAAGGAAAGACGGTGGAGGAAGCCTTGACTATCAAAAACACAGAT 1628
Query 373 ATCGCCAAGGAGCTCTGCCTTCCTCCCGTGAAACTGCACTGCTCCA---------------------------- 418
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCGCCAAGGAGCTCTGCCTTCCTCCCGTGAAACTGCACTGCTCCAAATCTGTGCTGTTTCCAGCAGAGGAGAA 1702
Query 419 ------------------------------------------------------------------------TG 420
||
Sbjct 1703 AACTCAGCTTTCGCCATAATCCTGTTTCCTGTGTATTTCTTCACTTCCTGTCTGGATGGTATTCCTGTCGGGTG 1776
Query 421 CTGGCTGAAGATGCAATCAAGGCCGCCCTGGCTGATTACAAATTGAAACAAGAACCCAAAAAAGGAGAGGCAGA 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CTGGCTGAAGATGCAATCAAGGCCGCCCTGGCTGATTACAAATTGAAACAAGAACCCAAAAAAGGAGAGGCAGA 1850
Query 495 GAAGCAA------------------------------------------------------------------- 501
||||.||
Sbjct 1851 GAAGAAATGAGCCCTCCCTCGGCGAAGCCTCCAGCAGGCCACACCAGCTGTTTCCCACCTGCTGTGCAGTCACC 1924
Query 502 -------------------------------------------------------------------------- 501
Sbjct 1925 TTAGATGTTCAGAAGCCGCTTCCTCTCCACTGAAGAGCTATGAGATACGCACAATACTTGCTGTTCACGTTATG 1998
Query 502 -------------------------------------------------------------------------- 501
Sbjct 1999 ACTCTCATGCAAGCAAAATACACAGTTTCATTGTTCTGAATCCTGTGGTTTCTTTCAGCCCACTTTTATCGCCT 2072
Query 502 -------------------------------------------------------------------------- 501
Sbjct 2073 TAACCTAGTTAATGTATATTTTGAATTGTGTGTATGACCTCAGAACTGAAATTGATAATGAAGTTGCAAGTTTT 2146
Query 502 -------------------------------------------------------------------------- 501
Sbjct 2147 GATAGCCCGTGAAGTGCATAAGTATCTAATTTTACCTGAATTGATTTGGGGGGAAATTACCAGTAGAATGCCTT 2220
Query 502 -------------------------------------------------------------------------- 501
Sbjct 2221 GGTCTGAATATTTGATAGAACCAATTGTTGTACATAAAACAGATTGCGCATATATATATATGTATAAAAAATAA 2294
Query 502 --------------------------------------------------- 501
Sbjct 2295 TAAAATAATGGAAGATGATGGTGTTCTCTAGTAAAAAAAAAAAAAAAAAAA 2345
