Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14104
Subject:
XM_006506633.3
Aligned Length:
2665
Identities:
2206
Gaps:
105

Alignment

Query    1  ATGATGAGTGATGAGAAGAACCTTGGTGTGTCCCAAAAATTGGTATCACCTTCAAGGAGCACAAGTAGCTGCTC  74
               ||||||||.||||||||.||.||||||||.|||||.|||||.|||||||||||.|||||||||||.|||||
Sbjct    1  ---ATGAGTGACGAGAAGAATCTCGGTGTGTCTCAAAAGTTGGTTTCACCTTCAAGAAGCACAAGTAGTTGCTC  71

Query   75  TTCCAAGCAAGGAAGTCGACAGGACAGCTGGGAAGTGGTGGAAGGACTGAGGGGGGAGATGAATTACACCCAGG  148
            .||||||||||||||.||.|||||||||||||||||.|||||||||.||||.|||||.||||.|||||||||||
Sbjct   72  CTCCAAGCAAGGAAGCCGGCAGGACAGCTGGGAAGTCGTGGAAGGATTGAGAGGGGAAATGACTTACACCCAGG  145

Query  149  AGCCACCAGTTCAGAAAGGATTTTTGCTGAAAAAGAGGAAGTGGCCCTTAAAAGGCTGGCATAAGAGATTCTTC  222
            ||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct  146  AGCCGCCAGTGCAGAAAGGATTTTTGCTGAAAAAGAGGAAGTGGCCCTTAAAAGGCTGGCACAAGAGATTCTTC  219

Query  223  TATCTGGACAAAGGAATCTTGAAATATGCCAAGAGCCAAACCGATATAGAGAGAGAGAAGCTGCATGGCTGCAT  296
            |..|||||.||.|||||||||||||||||||||||||||.|.|||||.|||.|.||||||.|||||||||||||
Sbjct  220  TGCCTGGAAAAGGGAATCTTGAAATATGCCAAGAGCCAAGCTGATATTGAGCGGGAGAAGTTGCATGGCTGCAT  293

Query  297  TGATGTCGGGCTCTCAGTGATGTCTGTAAAGAAGTCATCAAAATGCATAGACCTTGACACCGAGGAGCACATCT  370
            |||.||.||||||||.|||||||||||.||||||||.||.||.||.||.|||||.|||||.|||||||||||||
Sbjct  294  TGACGTGGGGCTCTCTGTGATGTCTGTGAAGAAGTCGTCTAAGTGTATCGACCTAGACACGGAGGAGCACATCT  367

Query  371  ACCATCTGAAGGTCAAGTCAGAAGAAGTCTTTGATGAGTGGGTATCGAAACTTCGCCACCACAGAATGTATCGT  444
            ||||.||||||||.||||||||||||.|||||||.||||||||.||.||.||.||.||||||||||||||.||.
Sbjct  368  ACCACCTGAAGGTGAAGTCAGAAGAACTCTTTGACGAGTGGGTGTCCAAGCTCCGTCACCACAGAATGTACCGG  441

Query  445  CAGAATGAAATTGCCATGTTTCCACATGAAGTTAACCACTTTTTCTCAGGGTCCACCATCACAGACTCTTCATC  518
            ||||||||.||.|||||||||||.|..||.||.||.||||||||||||||||||.|..|||||||.|||.|..|
Sbjct  442  CAGAATGAGATCGCCATGTTTCCCCGGGATGTCAATCACTTTTTCTCAGGGTCCTCTGTCACAGATTCTGCCCC  515

Query  519  TGGGGTGTTTGACTCCATTTCAAGTAGGAAGCGTAGCAGTATATCAAAGCAGAATTTATTTCAAACTGGAAGCA  592
            .||.|||||.||.||..||||.||||||||||||||||||.|||||||||||||||.|||||.|.|.|||||||
Sbjct  516  AGGAGTGTTCGAGTCAGTTTCCAGTAGGAAGCGTAGCAGTCTATCAAAGCAGAATTCATTTCCACCCGGAAGCA  589

Query  593  ATGTATCATTTTCTTGTGGTGGTGAGACACGAGTTCCATTATGGTTACAGTCTTCAGAGGACATGGAAAAATGC  666
            ||.|.|||||||||||||||||.||.||.||||||||.||.|||.||||||||||||||||||||||||||||.
Sbjct  590  ATTTGTCATTTTCTTGTGGTGGCGACACTCGAGTTCCTTTCTGGCTACAGTCTTCAGAGGACATGGAAAAATGT  663

Query  667  TCCAAAGACCTGGCGCACTGTCATGCCTACCTGGTAGAAATGAGCCAGCTCCTGCAAAGCATGGACGTCCTGCA  740
            ||.||||||.||||.|||||.||||||||||||.|.|||||||||||||||.|..|||||||||||||||||||
Sbjct  664  TCAAAAGACATGGCACACTGCCATGCCTACCTGCTGGAAATGAGCCAGCTCTTAGAAAGCATGGACGTCCTGCA  737

Query  741  TCGGACATACTCAGCACCAGCTATCAACGCCATCCAGGGTGGATCTTTTGAAAGTCCCAAAAAGGAAAAAAGAT  814
            ||||||||||||.||.|||||.||||||||||||                                        
Sbjct  738  TCGGACATACTCGGCGCCAGCCATCAACGCCATC----------------------------------------  771

Query  815  CGCACAGGAGGTGGCGGTCCAGAGCTATTGGCAAAGATGCTAAAGGAACACTGCAGGTCCCGAAACCTTTTTCT  888
                                                                 ||||||||.||.|||||||||
Sbjct  772  -----------------------------------------------------CAGGTCCCTAAGCCTTTTTCT  792

Query  889  GGCCCAGTAAGACTACACTCCTCCAATCCTAATTTGTCAACACTAGATTTTGGAGAAGAGAAAAATTATTCTGA  962
            |||||.||.|||||.|||||||||||||||||.|||||.||.||.||.||||||||||||||...|||.||.||
Sbjct  793  GGCCCTGTGAGACTGCACTCCTCCAATCCTAACTTGTCGACGCTGGACTTTGGAGAAGAGAAGTCTTACTCGGA  866

Query  963  TGGCTCTGAAACCTCATCAGAGTTTTCTAAAATGCAAGAAGATCTGTGTCATATTGCCCATAAAGTTTACTTCA  1036
            |||.||||||.||||.||.|||||.||.||.|||||.||.||||||||.|||.|.|||||.||||||||||||.
Sbjct  867  TGGTTCTGAAGCCTCGTCGGAGTTCTCCAAGATGCAGGAGGATCTGTGCCATGTCGCCCACAAAGTTTACTTCG  940

Query 1037  CTTTAAGGTCAGCTTTTAATATCATGTCAGCGGAGAGAGAGAAACTGAAGCAGCTGATGGAGCAGGATGCCTCC  1110
            ||||||||||.|||||.||||.|||.||.|.||||||||||||||||||||||||||||||||.|||..|||||
Sbjct  941  CTTTAAGGTCGGCTTTCAATAGCATATCGGTGGAGAGAGAGAAACTGAAGCAGCTGATGGAGCTGGACACCTCC  1014

Query 1111  TCCTCCCCGTCTGCTCAGGTCATTGGTCTGAAGAACGCCCTGTCATCCGCCCTAGCACAAAACACAGATCTTAA  1184
            .|||||||.||.|||||||||.|.||.||||||.||||.|||||||||||||||||||||||||||||||||||
Sbjct 1015  CCCTCCCCCTCCGCTCAGGTCGTCGGGCTGAAGCACGCTCTGTCATCCGCCCTAGCACAAAACACAGATCTTAA  1088

Query 1185  AGAACGCTTACGCAGAATCCATGCCGAGTCTCTGCTCCTCGACTCCCCCGCTGTCGCCAAGTCGGGTGACAATC  1258
            ||||||||||||||||||||||||.||.|||||||||||||||.|.||||||||..|||||.||||.|||||.|
Sbjct 1089  AGAACGCTTACGCAGAATCCATGCGGAATCTCTGCTCCTCGACCCGCCCGCTGTTCCCAAGCCGGGGGACAACC  1162

Query 1259  TGGCAGAGGAAAACTCCAGAGATGAAAACCGAGCTCTAGTTCATCAGCTTTCTAATGAAAGTAGACTCTCCATC  1332
            |||||||||||||||||||.|||||...||||||.||.||.||.|||||.||.|||||.||.||.||.||.|||
Sbjct 1163  TGGCAGAGGAAAACTCCAGGGATGAGGGCCGAGCCCTGGTGCACCAGCTCTCCAATGAGAGCAGGCTGTCTATC  1236

Query 1333  ACTGACTCCCTTTCTGAGTTTTTTGATGCTCAGGAAGTTCTGTTATCTCCAAGCTCTTCAGAAAACGAGATTTC  1406
            ||.|||||||||||||||||.||.|||||.||||||||||||.|.|||||.|||||||||||||||||||||||
Sbjct 1237  ACCGACTCCCTTTCTGAGTTCTTCGATGCCCAGGAAGTTCTGCTGTCTCCTAGCTCTTCAGAAAACGAGATTTC  1310

Query 1407  TGATGATGACTCATATGTCAGTGACATAAGTGATAATCTTTCCTTAGATAATCTCAGTAATGATTTAGATAATG  1480
            |||||||||.|||||.|||||||||||||||||||||||.||||||||.||.|||||||||||||||||.||||
Sbjct 1311  TGATGATGATTCATACGTCAGTGACATAAGTGATAATCTGTCCTTAGACAACCTCAGTAATGATTTAGACAATG  1384

Query 1481  AGAGACAGACCTTGGGGCCTGTCCTTGATAGTGGTCGGGAAGCGAAGTCCCGGAGAAGAACGTGCCTGCCGGCG  1554
            |.||||||||||||||||||||.||.||.|||.||.|||||||.|..|||...||.||.||..||.|||||||.
Sbjct 1385  AAAGACAGACCTTGGGGCCTGTTCTCGAGAGTAGTGGGGAAGCCAGATCCAAAAGGAGGACCAGCTTGCCGGCA  1458

Query 1555  CCCTGCCCGAGCAGCAGTAACATCAGCCTGTGGAACATCCTGAGGAACAACATCGGGAAGGACCTGTCCAAGGT  1628
            ||..|.||.|.||.|||||.|.|.|||.||||||.|||||||.|.||||||||.||||||||||||||||||||
Sbjct 1459  CCGGGTCCCAACACCAGTAGCGTTAGCTTGTGGAGCATCCTGCGCAACAACATTGGGAAGGACCTGTCCAAGGT  1532

Query 1629  GGCCATGCCGGTGGAGCTGAACGAGCCCCTGAACACGCTGCAGAGGCTCTGCGAGGAGCTGGAGTACAGCGAGC  1702
            |||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||.||||||||||
Sbjct 1533  GGCCATGCCGGTGGAGCTGAACGAGCCCCTGAACACGCTGCAGCGGCTCTGCGAGGAGCTGGAATACAGCGAGC  1606

Query 1703  TCCTGGACAAGGCCGCGCAG-ATTCCCAGCCCCCTGGAAAGGATGGTATATGTGGCAGCCTTTGCCATATCAGC  1775
            |.||||||||||||.|| || ||.|||||.||||||||.||||||||.||.||.||||||||.|||||.||.||
Sbjct 1607  TTCTGGACAAGGCCTCG-AGAATCCCCAGTCCCCTGGAGAGGATGGTGTACGTAGCAGCCTTCGCCATCTCCGC  1679

Query 1776  GTATGCATCTAGCTACTACCGAGCTGGAAGCAAGCCATTTAATCCGGTTCTTGGAGAAACATATGAATGTATTC  1849
            .||||||||.|||||||.||||||.||.||||||||.|||||.|||||.|||||||||||.||.|||||.||.|
Sbjct 1680  ATATGCATCCAGCTACTTCCGAGCAGGCAGCAAGCCGTTTAACCCGGTCCTTGGAGAAACGTACGAATGCATCC  1753

Query 1850  GGGAGGACAAGGGCTTCCAGTTTTTTTCAGAACAGGTCAGCCACCATCCGCCTATCTCTGCGTGTCATGCTGAG  1923
            |..||||||||||.||||||||||||.|.||.||||||||||||||.||.||||||||.||.||.||.||||||
Sbjct 1754  GACAGGACAAGGGTTTCCAGTTTTTTGCCGAGCAGGTCAGCCACCACCCACCTATCTCCGCCTGCCACGCTGAG  1827

Query 1924  TCTAGAAATTTTGTTTTCTGGCAAGATGTGAGATGGAAAAACAAATTCTGGGGCAAATCCATGGAAATTGTTCC  1997
            ||..||||.||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||.||
Sbjct 1828  TCCGGAAACTTTGTTTTCTGGCAAGATGTGAGATGGAAAAATAAATTCTGGGGTAAATCCATGGAAATTGTCCC  1901

Query 1998  AATTGGCACAACCCATGTGACTCTGCCAGTTTTTGGGGATCATTTTGAGTGGAACAAAGTGACCTCTTGCATCC  2071
            .||||||||||||||.|||||||||||.|.||||||.|||||.|||||||||||||||||.|||||.|||||||
Sbjct 1902  GATTGGCACAACCCACGTGACTCTGCCTGCTTTTGGAGATCACTTTGAGTGGAACAAAGTAACCTCCTGCATCC  1975

Query 2072  ATAACATCTTAAGCGGGCAGAGGTGGATTGAGCACTATGGAGAGATTGTCATCAAGAACCTGCATGATGATTCC  2145
            |.||||||||.|||||.|||.|.|||||.|||||||||||.||.||||.|||||||||||||.||||.||.|||
Sbjct 1976  ACAACATCTTGAGCGGACAGCGATGGATCGAGCACTATGGCGAAATTGACATCAAGAACCTGAATGACGACTCC  2049

Query 2146  TGCTACTGCAAAGTGAATTTTATAAAGGCAAAATACTGGAGCACTAATGCCCATGAGATTGAAGGCACAGTGTT  2219
            |||.|||||||||||||.||.||||||||.||.||||||||||||||||||||.|||||.||||||||.|||||
Sbjct 2050  TGCCACTGCAAAGTGAACTTCATAAAGGCTAAGTACTGGAGCACTAATGCCCACGAGATCGAAGGCACGGTGTT  2123

Query 2220  TGACAGGAGTGGAAAAGCGGTTCATCGGCTGTTTGGGAAATGGCATGAAAGCATCTACTGTGGCGGCGGCTCCT  2293
            .|||.|.|||||.||.||.||.||.||||||||||||||||||||.||.|||||||||||||||||||.|||||
Sbjct 2124  CGACCGCAGTGGGAAGGCTGTGCACCGGCTGTTTGGGAAATGGCACGAGAGCATCTACTGTGGCGGCGCCTCCT  2197

Query 2294  CTTCTGCCTGTGTATGGAGAGCAAATCCTATGCCGAAAGGCTACGAGCAATACTATAGCTTCACACAGTTTGCG  2367
            ||||..|.||.||.||||||||||||||.||||||||||||||.|||||.||.|||.||||||||||||||||.
Sbjct 2198  CTTCCACATGCGTCTGGAGAGCAAATCCCATGCCGAAAGGCTATGAGCAGTATTATGGCTTCACACAGTTTGCA  2271

Query 2368  CTGGAATTAAATGAAATGGATCCATCATCAAAGTCTTTATTGCCACCTACTGACACTCGATTTAGGCCAGACCA  2441
            ||.||.|||||||||||||||||.|..||||.|||||||||.|||||.||.||||||||.|||||.|||||.||
Sbjct 2272  CTAGAGTTAAATGAAATGGATCCTTTGTCAAGGTCTTTATTACCACCCACCGACACTCGGTTTAGACCAGATCA  2345

Query 2442  GAGGTTTCTAGAGGAAGGGAACTTAGAAGAAGCTGAAATACAAAAGCAGAGGATTGAACAACTGCAGAGAGAAA  2515
            .|||.|||||||||||||||||.||||.||.|||||..|.||.|||||||||||.||..|.|||||||||||..
Sbjct 2346  AAGGCTTCTAGAGGAAGGGAACATAGAGGAGGCTGAGGTTCAGAAGCAGAGGATCGAGAAGCTGCAGAGAGAGC  2419

Query 2516  GGCGGCGGGTCTTAGAAGAAAATCATGTGGAGCACCAGCCTCGGTTTTTCAGGAAATCC---GACGATGACTCT  2586
            |||||.|||||||.||.||.||...|||||||||||||||.||||||||||||||||||   |||||||   ||
Sbjct 2420  GGCGGAGGGTCTTGGAGGAGAACGGTGTGGAGCACCAGCCCCGGTTTTTCAGGAAATCCAGTGACGATG---CT  2490

Query 2587  TGGGTGAGCAACGGCACCTATTTGGAACTTAGAAAAGATCTTGGTTTTTCCAAACTGGACCATCCTGTC-TATG  2659
            |||||.|||||.||.|||||..|||||||.||.|||||.|||||.||||||||..||||||||||.||| ||||
Sbjct 2491  TGGGTAAGCAATGGGACCTACCTGGAACTGAGGAAAGACCTTGGCTTTTCCAAGTTGGACCATCCCGTCTTATG  2564

Query 2660  G  2660
            |
Sbjct 2565  G  2565

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