Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14172
- Subject:
- XM_006538166.3
- Aligned Length:
- 1033
- Identities:
- 659
- Gaps:
- 299
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCGAGTGTGCTGGTTGGTGAGACAGGACAGCAGGCACCAGCGAATCAAACTTCCCCATTTGGAAGCTGTTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GATTGGTCGAAGCCCAGAGACCAAGATCACAGATAAGAAATGTTCCCGACAGCAAGTACAGTTGAAAGCAGAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTAACAAGGGATATGTCAAAGTACAGCAGATGGGGGTCAACCCCACCAGCATTGACTCGGGCGTCATCGGGAAG 222
Query 1 ---------------------------------------ATGGTGAATGAACTTTATCCATATATTGTAGAGTT 35
||||||||||.||||||||||||.||.||||||||
Sbjct 223 GACCAAGAGAAGAAGCTGCTGCCTGGTCAGGTTCTCCACATGGTGAATGGACTTTATCCATACATCGTAGAGTT 296
Query 36 TGAGGAAGAGGCAAAGAACCCTGGCCTGGAAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAG 109
||||||||.||||.|||.||||..||| ||||||.||||||||||||||.|||| ||.||| ||||
Sbjct 297 TGAGGAAGTGGCAGAGAGCCCTAACCT---AACACAGAGGAAGAGAAAGAGGTCAG---ACTGTG-----ATAG 359
Query 110 AAAGG-GATGCTGCTCAGGAAGCTGAGGCTGGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGT 182
..||| ||| ||||||||||.|||||||||||||||.|||||||||||.|.|..||||.||||||||
Sbjct 360 TGAGGAGAT--------GGAAGCTGAGTCTGGGACAGGGCTGGCACCTGGGAGCAGCCCCAGCCAGTGCTCTGT 425
Query 183 G-CCCCTAAAGAAGGGAAAAG-ATGCACCTATCAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGAT 254
| ||||| ||||| |||.||| |||.|.|.|.||||||||||||.|||||||||||||||||||||||||||||
Sbjct 426 GTCCCCT-AAGAA-GGACAAGAATGGAGCCACCAAAAAGGAATCACTGGGCCACTGGAGTCAAGGCTTGAAGAT 497
Query 255 TTCTATGCAGGACCCCAAAATGCAGGTTTACAAAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGG 328
.||||||.|.||||||||||||||||||||||||||.||.||||||||||||||.||||||||||||||.||||
Sbjct 498 GTCTATGAAAGACCCCAAAATGCAGGTTTACAAAGACGACCAGGTGGTGGTGATTAAGGATAAATACCCCAAGG 571
Query 329 CCCGTTACCATTGGCTGGTCTTACCGTGGACCTCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAA 402
|||||.||||.||||||||||||||||||.|||||||||||||||||||||.||||.||||.||||||||||||
Sbjct 572 CCCGTCACCACTGGCTGGTCTTACCGTGGGCCTCCATTTCCAGTCTGAAGGTTGTGACCAGTGAACACCTTGAA 645
Query 403 CTCCTTAAGCATATGCACACTGTGGGGGAAAAGGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCG 476
||.||.||.|||||||||.||||||||||.||||||||.|.||||||||||||.|||||||||||.||||||||
Sbjct 646 CTTCTCAAACATATGCACGCTGTGGGGGAGAAGGTGATAGCAGATTTTGCTGGATCCAGCAAACTGCGCTTCCG 719
Query 477 ATTGGGCTACCACGCCATTCCGAGTATGAGCCATGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTT 550
||||||||||||.||||||||.||.||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 720 ATTGGGCTACCATGCCATTCCCAGCATGAGCCACGTACATCTTCATGTGATCAGCCAGGATTTTGATTCTCCTT 793
Query 551 GCCTTAAAAACAAAAAACATTGGAATTCTTTCAATACAGAATACTTCCTAGAATCACAAGCTGTGATCGAGATG 624
||||||||||||||||.||||||||||||||.||||||||||||||.||.||||||||||||||||||.|||||
Sbjct 794 GCCTTAAAAACAAAAAGCATTGGAATTCTTTTAATACAGAATACTTTCTGGAATCACAAGCTGTGATCAAGATG 867
Query 625 GTACAAGAGGCTGGTAGAGTAACTGTCCGAGATGGGA--TGCCTGAGCTCTTGAAGCTGCCCCTTCGTTGTCAT 696
||.||.||.||.||.|||||.|||||...||||||.| || ||||||||||||||||||.||.|||||.|||
Sbjct 868 GTTCAGGAAGCCGGCAGAGTGACTGTTAAAGATGGCACTTG--TGAGCTCTTGAAGCTGCCTCTCCGTTGCCAT 939
Query 697 GAGTGCCAGCAGCTGCTGCCTTCCATTCCTCAGCTGAAAGAACATCTCAGGAAGCACTGGACACAG----- 762
|||||.||||||||||||||||||||.||.|||||||||||.||.||||||||||||||| |
Sbjct 940 GAGTGTCAGCAGCTGCTGCCTTCCATCCCGCAGCTGAAAGAGCACCTCAGGAAGCACTGG-----GGCGGG 1005