Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14172
- Subject:
- XM_017014832.1
- Aligned Length:
- 1175
- Identities:
- 660
- Gaps:
- 481
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTAACGTGAATTTGTCCGTCTCCGACTTCTGGAGAGTGATGATGCGGGTGTGCTGGTTGGTGAGACAGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGCCGGCACCAGCGAATCAGACTTCCACATTTGGAAGCAGTTGTGATTGGGCGTGGCCCAGAGACCAAGATCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGATAAGAAATGTTCTCGACAGCAAGTACAGTTGAAAGCAGAGTGTAACAAGGGATATGTCAAGGTAAAGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGGAGTCAATCCCACCAGCATTGACTCAGTCGTAATTGGGAAGGACCAAGAGGTGAAGCTGCAGCCTGGCCA 296
Query 1 ----------ATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGG 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GGTTCTCCACATGGTGAATGAACTTTATCCATATATTGTAGAGTTTGAGGAAGAGGCAAAGAACCCTGGCCTGG 370
Query 65 AAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCT 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AAACACACAGGAAGAGAAAGAGATCAGGCAACAGTGATTCTATAGAAAGGGATGCTGCTCAGGAAGCTGAGGCT 444
Query 139 GGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTAT 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGACAGGGCTGGAACCTGGGAGCAACTCTGGCCAATGCTCTGTGCCCCTAAAGAAGGGAAAAGATGCACCTAT 518
Query 213 CAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACA 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CAAAAAGGAATCCCTGGGCCACTGGAGTCAAGGCTTGAAGATTTCTATGCAGGACCCCAAAATGCAGGTTTACA 592
Query 287 AAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACC 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAGATGAGCAGGTGGTGGTGATAAAGGATAAATACCCAAAGGCCCGTTACCATTGGCTGGTCTTACCGTGGACC 666
Query 361 TCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAA 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCCATTTCCAGTCTGAAGGCTGTGGCCAGGGAACACCTTGAACTCCTTAAGCATATGCACACTGTGGGGGAAAA 740
Query 435 GGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAG-- 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GGTGATTGTAGATTTTGCTGGGTCCAGCAAACTCCGCTTCCGATTGGGCTACCACGCCATTCCGAGTATGAGTT 814
Query 507 CCATGTACATC-----TTCATGTGATCAGCCAGGATTTTGATTCTCCTTGCCTTAAAAACAAAAAACATTGGAA 575
|||| || ||| |||| ||| |||| |.|.||| ||.|
Sbjct 815 CCAT-----TCGAGTGTTC-TGTG----GCC------------CTCC-------AGAGACA---------GGCA 850
Query 576 TTC------------TTTCAATACAGAATACTTCCT--------AGAATCACAAGCTGTGA-----TCGAGATG 624
|.| ||||||.||..||| ||.|| |||||.|||..| |||| |.||||||
Sbjct 851 TCCTGCAAGGCCAGATTTCAAGACCAAAT--TTGCTTGAGTCTGAGAATGACACAC-GTGAAGGCTTAGAGATG 921
Query 625 G------TACAAGAGG----CTGGTAGAGTAACTGTCCGAGATGGGATGCCTGAGCTCTTGAAGCTGCCC---- 684
| | |.||||| |||..||.| |.|||.| ||| ||||.|||.||..|||||
Sbjct 922 GCCTGGAT-CCAGAGGCCCCCTGTGAGTG---CAGTCAG--------TGC--GAGCCCTTCAACATGCCCTATA 981
Query 685 ---------CTTC-------------------GTTGTCATGAGTG---------CCAGCAGCTGCTGCCTTCCA 721
|||| |.|||||.||..| |||.|||||||..|
Sbjct 982 TGGTGTCTGCTTCAGACAACTCTCATGCCTATGCTGTCAGGACCGGAATCCTCCCCACCAGCTGCAAC------ 1049
Query 722 TTC------CTCAGCTGAA---------AGAAC------ATCTCAGGAAGCACTGGACA---CAG 762
||| ||..|||||| |||.| .||.||| |||| ||| ||
Sbjct 1050 TTCATGGATCTGTGCTGAAGATACCCATAGATCCTGGGGTTCCCAG--AGCA----ACAATGCA- 1107
