Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14265
Subject:
NR_146232.1
Aligned Length:
1849
Identities:
605
Gaps:
1242

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGGGAGCCTGGGTCCTGGGGAGCCGCCCCCGCCCCCCCCAGCACCGTAGCGAGACTCGCGCCCCCCGCCGGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCCCACCTCCGCGCCCGCCCCGCGGGCTGAGCTGCCCGACCGGGGCCCGCCCCCGGCGCCCACCATGTACGCCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTGTGCGGTTCCTGGAGGACAACGTCTGCTACGCGCTGCCCGTGTCGTGCGTGCGCGACTTCAGCCCCCGCTCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGGCTGGATTTTGACAACCAGAAGGTGTACGCCGTGTACCGGGGCCCGGAGGAATTGGGCGCCGGGCCCGAGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCCCCCGCGCGCCCCCCGCGACTGGGGCGCGCTGTTGCTCCACAAGGCCCAGATCCTGGCGCTGGCAGAAGACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AATCTGACCTTGAAAACAGTGTGATGCAGAAGAAAATAAAAATCCCCAAGCTTTCTCTTAATCATGTAGAAGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GATGGAGAGGTTAAAGATTATGGGGAAGAAGATTTACAGCTTAGACACATCAAGGATTGTCTGGGGAAATATTG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCTGCAGTCCAAGAAAATCCCAGCTGCCCTTGCCTGAACTGATTCTCGTTGTCCTACACAGAGACCTGAGGGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CGGAAGCCGAGCGAAGTGGCGCACAAGAGCATCGAGGCAGTGGTGGCTCGGCTAGAGAAGCAGAACGGCCTGAG  666

Query    1  -------------------------------------------------------------ATGGAAAGTCTAG  13
                                                                         |||||.|||||||
Sbjct  667  CCTGGGCCATAGCACGTGTCCGGAAGAGGTCTTCGTGGAGGCCTCGCCAGGCACAGAGGACATGGACAGTCTAG  740

Query   14  AAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGCGC  87
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  AAGATGCTGTGGTGCCCCGGGCTCTGTATGAGGAGCTGCTGCGCAACTACCAGCAGCAACAGGAAGAGATGCGC  814

Query   88  CACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGGGC  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CACCTCCAGCAGGAGCTGGAGCGGACTCGGAGGCAGCTGGTACAACAGGCCAAGAAGCTCAAGGAGTACGGGGC  888

Query  162  ACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGAGGCTTGGCA  235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct  889  ACTTGTGTCTGAAATGAAGGAGCTCCGTGACCTTAACCGGAGGCTCCAGGACGTGCTGCTCCTGCGGCTTGGCA  962

Query  236  GCGGTCCCGCCATTGATCTGGAAAAAGTAAAGTCAGAATGTCTCGAGCCCGAGCCGGAGTTACGGAGCACTTTC  309
            ||                                                                        
Sbjct  963  GC------------------------------------------------------------------------  964

Query  310  AGTGAGGAAGCAAATACGTCGTCCTATTACCCCGCTCCTGCGCCTGTCATGGACAAGTATATCCTAGACAATGG  383
                                                                                      
Sbjct  965  --------------------------------------------------------------------------  964

Query  384  CAAGGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGATT  457
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  965  ---GGTCCATCTGGGAAGCGGGATTTGGGTTGATGAGGAGAAATGGCACCAGCTACAAGTAACCCAAGGAGATT  1035

Query  458  CCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCGTC  531
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1036  CCAAGTACACGAAGAACTTGGCAGTTATGATTTGGGGAACAGATGTTCTGAAAAACAGAAGCGTCACAGGCGTC  1109

Query  532  GCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAGTG  605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1110  GCCACAAAAAAAAAGAAAGATGCAGTCCCTAAACCACCCCTCTCGCCTCACAAACTAAGCATCGTCAGAGAGTG  1183

Query  606  TTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAAGT  679
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  TTTGTATGACAGAATAGCACAAGAAACTGTGGATGAAACTGAAATTGCACAGAGACTCTCCAAAGTCAACAAGT  1257

Query  680  ACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATTTG  753
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258  ACATCTGTGAAAAAATCATGGATATCAATAAATCCTGTAAAAATGAAGAACGAAGGGAAGCAAAATACAATTTG  1331

Query  754  CAA-----------------------------------------------------------------------  756
            |||                                                                       
Sbjct 1332  CAATAAACTTTGGATTTTTCATAAAGCTTTCGTGTTTTCCTTGTGTGGCATGTGATTTGCGAGCGATGGTGCCG  1405

Query  757  --------------------------------------------------------------------------  756
                                                                                      
Sbjct 1406  TCCAAATCAGACCCCACCGTGCATGGTGGTGTGTGTGCAGGGATCCATCGGGTTCTGGGGTCAGCGGCTTGTTC  1479

Query  757  --------------------------------------------------------------------------  756
                                                                                      
Sbjct 1480  TGAATGTGGACACTCCAAAGACGACAGATGGCTTTGCTGAGACTCAGGAGCAGCCTGGCACTGGTGTCCTTCTG  1553

Query  757  --------------------------------------------------------------------------  756
                                                                                      
Sbjct 1554  GGAATGGGGAAAACACTCTTCTTGGAGGGGGATAAGGTTGCCTGAGTTGCCTGTCACTTGACTGGGGTTTGAAT  1627

Query  757  -------------------------------------------------------------------------  756
                                                                                     
Sbjct 1628  GGATATTTTTACTATCCAAGGACTTCTTTGTTGCTCTATTTTGTTCTATAATAAATTTTCATTAATTCTTTGA  1700

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