Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14299
- Subject:
- NM_207213.2
- Aligned Length:
- 2532
- Identities:
- 1425
- Gaps:
- 876
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGATCGTGTTCTGAGAGATGTGTTCGACTACAGTTACAGAGACTATATTCTCTCCTGGTACGGGAACCTCAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAGAGATGACGGACAGCTCTACCATCTGCTCTTAGATGACTTCTGGGAAATTGTCAAGCAGATTCGCCAGAGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGAGTCACGTGGATGTGGTTAAAGTTGTCTGTAATGATATTGTAAAGGCTTTGCTCACTCACTTCTGTGACCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGCTGCTACTGCCAGACATGAAGAACAGCCAAGGCCTTTTGTGTTGCATGCATGCTTGAAGGATTCACATGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAAGTAAGATTCCTTCAAACATGTTCTCAGGTTCTGGTGTTATGCCTTCTCCCTTCTAAGGATATCCAGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAGCTTACGTACAATGCTCGCAGAAATTCTTACGACAAAAGTCTTGAAGCCAGTAGTGGAATTGCTGAGTAAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTGACTACATTAACCAAATGCTGCTCAGGCAGTTGGAGTACAGAGAGCAGATGAGTGAGCATCACAAGCGAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTACACGTACGCGCCTTCCTACGAGGACTTTATCAAGCTCATCAACAGCAACTCTGATGTGGACTTCCTGAAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCTCAGGTATCAAATTGTAGTGGAGATAATCCAAGCAACTACAATCAGCAGCTTTCCCCAGCTGAAGAGACAC 666
Query 1 ---------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACT 53
||||||.||||||||.|||||||||||||||||||.||||||||.|||||.||
Sbjct 667 AAGGGTAAGGAATCAGCTGCCATGAAAACTGATCTCTTGAGGGCCAGGAACATGAAAAGGTACATTAACCAGCT 740
Query 54 GACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATG 127
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 741 GACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGTCCTGCCTATGACCAGCAAGAGGATG 814
Query 128 GGGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTC 201
|.|||..||||||.||||||||||||||.|||||.|||||||||||||||||||||||..||.|||||.|.|||
Sbjct 815 GAGCCTCGGATGAAGGGGAAGGGCCTCAGAGCCAAAAGATTCTTCAGTTTGAAGATATTATGACCAATCCTTTC 888
Query 202 TACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGA 275
||||||||||.||||||||..|||||||||.||||.|||||..|.|||||..||.|.||||||||.||||..||
Sbjct 889 TACCGAGAGCGCTTTGGAACATACATGGAACGGATAGACAAGCGGGCTCTAGTTGGCTTTTGGGAGTCTGCCGA 962
Query 276 ACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGA 349
|||..|.||||||||||||||||.|||||||||||||||||||.|||||||.||||||||||||||.|||||.|
Sbjct 963 ACACCTGAAGAATGCTAACAAGAGTGAAATTCCACAATTAGTTAGTGAAATGTATCAGAATTTCTTCGTGGAAA 1036
Query 350 GCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAA 423
||||.|||||.||.||||||||.|||||||||||||||||.||||||||||||||.|||||.|.|||.||.||.
Sbjct 1037 GCAAGGAAATCTCCGTGGAAAAGTCACTTTACAAAGAAATCCAGCAGTGTCTTGTGGGAAACAGAGGCATCGAG 1110
Query 424 GTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTATTGTCAGTGA 497
||.|||..|||||||||.|..|||||.|..|||...||.|.|||..||||||||||.||.||..|.|||||.||
Sbjct 1111 GTGTTCAGCAAAATCCAAGCCGATGTGTCCGAGGTGCTGAGGGAGCGGTATTACCCCTCCTTCCTCGTCAGCGA 1184
Query 498 CCTGTATGAGAA----AT---TGTTGATAAAAGAGGAAGAAAAACATGCCT----CACAGATGATTTCCAACAA 560
|||||||||||| || ||..|| |.|||||||.|| |||| |.|||.||...||..|.||
Sbjct 1185 CCTGTATGAGAAGCTCATGCGTGAGGA-AGAAGAGGAGGA-------GCCTGACGCTCAGCTGGCCTCTGAGAA 1250
Query 561 GGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAG 634
|||||||.||||..||.|||.|||||||||||||||.||.|| .||.||.||||.|..|.|||.|||.|.||
Sbjct 1251 GGATGAGCTGGGTTCAGGAGGTGAGGCTGGTGAGGAGGCTGT---AGAAGGCACCAGTGGGGTCAGTGATCCAG 1321
Query 635 CCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATT 708
||||.||||||||||.||||||.|||||.||||||||||||||||||||.||||||||||||||||.|||||||
Sbjct 1322 CCAGCTTTGCTGTAATCAAACTCCGAGAGCTAAATGAGAAACTTGAATACAAAAGGCAAGCTCTAAGTTCTATT 1395
Query 709 CAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACG 782
||.|||||||||||||||||.|||||||||.|||||||||||||||||||||||.|.||.||||||||||||.|
Sbjct 1396 CAGAATGCACCAAAACCTGATAAGAAGATTATTTCCAAGTTGAAGGATGAAATACTTCTGATAGAGAAAGAATG 1469
Query 783 CACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCA 856
|||.|..||||||||||||||.||.|||||.||||||||||||||.|||||.|||.||||||.|||.|||||||
Sbjct 1470 CACGGCTCTTCAGCTGCACATGGCGAGAACAGATTGGTGGTGTGAGAACCTGGGCCTGTGGAGAGCATCCATCA 1543
Query 857 CCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTT 930
||||.|.||||||.||||||||||||||.||||||.||||.|||||||||||||.|||||..||||||||||||
Sbjct 1544 CCAGCGCAGAGGTGACAGAAGAGAATGGCGAGCAAATGCCTTGTTACTTTGTCAGGGTAAATCTACAAGAAGTT 1617
Query 931 GGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAG 1004
||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.||
Sbjct 1618 GGAGGAGTTGAAACTAAGAACTGGACCGTCCCAAGAAGGCTCAGTGAGTTTCAGAATTTACATCGGAAACTTAG 1691
Query 1005 TGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAA 1078
||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|
Sbjct 1692 TGAGTGTGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTCAGTAAGCTGCCTTTCAAATCTATAGATCACA 1765
Query 1079 AGTTTATGGAAAAGTCGAAG-AATCAATTAAAT-----------------------------AAG--------- 1113
||||..|||.|||||| ||| |||||.|||||| |||
Sbjct 1766 AGTTCCTGGGAAAGTC-AAGAAATCAGTTAAATGCATTTCTACAGAACCTGCTTTCAGATGAAAGACTGTTCCA 1838
Query 1114 -------------------TTTTT--------------AC---------------------------------- 1120
||||| ||
Sbjct 1839 GAGCGAAGCACTTTATGCCTTTTTGAGCCCTTCTCCTGACTACCTCAAGGTCATTGATGTACAGGGGAAAAAGA 1912
Query 1121 ------------------------------------------------------------AGGAGGAGACAGAG 1134
|||||||||.|||.
Sbjct 1913 CCTCCTTCTCATTGTCTTCATTTCTGGAAAAACTTCCTCGTGACTTCTTCTCCCATCAGGAGGAGGAGATAGAA 1986
Query 1135 GAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCAT 1208
||||||||.||||||||.|||||.||.|||||||||||.||||.|||.||..|||||||||||||.||||||||
Sbjct 1987 GAGGACAGCGACCTGTCCGATTACGGGGATGATGTGGACGGGAAGAAGGATTCCTTGGCTGAACCGTGTTTCAT 2060
Query 1209 GTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGG 1282
|.||||.|||||||||||.|||||||||||||||||||||||||||.|||||||||||||.||.||.|||||||
Sbjct 2061 GCTGATCGGGGAGATTTTCGAACTTCGAGGAATGTTTAAATGGGTGCGAAGAACATTAATCGCTCTTGTTCAGG 2134
Query 1283 TCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTT 1356
||||.||||||||||||||||||||.||||||||.|||||.||.||||||||.|.|||.|||||.|||.||||.
Sbjct 2135 TCACGTTTGGAAGAACCATCAACAAGCAAATCCGCGACACGGTGAGCTGGATCTCCAGCGAGCAGATGCTGGTC 2208
Query 1357 TACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAA 1430
||||||||||.|..||||||||||||.|||||||||||.|||||..|||||||.||.||.|.||||.|||||..
Sbjct 2209 TACTACATCAGTGCTTTCCGGGATGCCTTTTGGCCAAACGGGAAACTGGCACCTCCAACAAGAATCCGAAGCGT 2282
Query 1431 AGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCC 1504
.|..||.||||||||.||.||.||||||||||||||.||||||||.||.|||||||||||||..||||||||||
Sbjct 2283 GGCACAGAGTCAGGAGACGAAGCAGAGAGCACAGCAGAAGCTGCTCGAGAACATTCCAGATACACTTCAGAGCC 2356
Query 1505 TTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAG 1578
|||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||..||||||||.
Sbjct 2357 TTGTTGGACAGCAAAATGCCCGCCATGGTATAATAAAAATATTCAAGGCGCTGCAAGAGACAAAGGCCAACAAA 2430
Query 1579 CATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACT 1652
||.|||.|.||||.|||||||||.||||||||.|..||.||.||.|||||||||||.|.|||..|.|||||..|
Sbjct 2431 CACCTGCTCTATGTGCTGATGGAGCTGCTGCTGACAGAGCTCTGCCCTGAGCTGAGGGCTCACCTGGATCAGTT 2504
Query 1653 TAAAGCTGGCCAAGTT 1668
.||||||||||||||.
Sbjct 2505 CAAAGCTGGCCAAGTC 2520
