Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14299
- Subject:
- XM_005263267.5
- Aligned Length:
- 3012
- Identities:
- 1666
- Gaps:
- 1344
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGGGCCGCAGGCGCCGGCGGCCGTCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGAGGCAGCAGCAGCGGCGGCGCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCGCCGCCGTGGCCCTCTCCTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTGTTCAGGCTCAGCCTGTACCTGAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCGGAGCCCGCGCGCCCAGCCGCCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCCCGCCGGGGAGTCCTGTGTATGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGTGTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGACATGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGTATCAAATTGTAGTGGAA 1110
Query 1 ---------------------------------------------------------------------ATGAA 5
|||||
Sbjct 1111 ATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACAAAGGTAAAGAAACTGCGGCAATGAA 1184
Query 6 AGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTGTGAGA 1258
Query 80 AGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCT 153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGGGGCCCTGGATGAGGGGGAAGGGCCT 1332
Query 154 CAAAGCCAGAAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACAT 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 CAAAGCCAGAAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACAT 1406
Query 228 GGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATG 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATG 1480
Query 302 AAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCA 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCA 1554
Query 376 CTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGT 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGT 1628
Query 450 TTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAG 523
||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 TTATGAGACCCTAAAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAG 1702
Query 524 AGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAA 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAA 1776
Query 598 GCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGA 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGA 1850
Query 672 GAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCA 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCA 1924
Query 746 AGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATAGCAAGAACGGATTGG 819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1925 AGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGG 1998
Query 820 TGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATT 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATT 2072
Query 894 GCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAA 967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 GCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAA 2146
Query 968 GGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCT 1041
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 GGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCT 2220
Query 1042 TCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTT 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTT 2294
Query 1116 TTTAC--------------------------------------------------------------------- 1120
|||||
Sbjct 2295 TTTACAGAATCTGCTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTG 2368
Query 1121 -------------------------------------------------------------------------- 1120
Sbjct 2369 ACTACCTCAAGGTTATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCT 2442
Query 1121 ----------------------AGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGA 1172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CGCGACTTCTTCTCCCACCAGGAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGA 2516
Query 1173 TGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTA 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 TGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTA 2590
Query 1247 AATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGAC 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGAC 2664
Query 1321 ACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAA 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 ACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAA 2738
Query 1395 TGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAA 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 TGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAA 2812
Query 1469 AGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAA 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAA 2886
Query 1543 ATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGA 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 ATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGA 2960
Query 1617 ACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 1668
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 ACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT 3012
