Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14299
Subject:
XM_006509243.3
Aligned Length:
2532
Identities:
1425
Gaps:
876

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGATCGTGTTCTGAGAGATGTGTTCGACTACAGTTACAGAGACTATATTCTCTCCTGGTACGGGAACCTCAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CAGAGATGACGGACAGCTCTACCATCTGCTCTTAGATGACTTCTGGGAAATTGTCAAGCAGATTCGCCAGAGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGAGTCACGTGGATGTGGTTAAAGTTGTCTGTAATGATATTGTAAAGGCTTTGCTCACTCACTTCTGTGACCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  AAGGCTGCTACTGCCAGACATGAAGAACAGCCAAGGCCTTTTGTGTTGCATGCATGCTTGAAGGATTCACATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGAAGTAAGATTCCTTCAAACATGTTCTCAGGTTCTGGTGTTATGCCTTCTCCCTTCTAAGGATATCCAGTCTC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCAGCTTACGTACAATGCTCGCAGAAATTCTTACGACAAAAGTCTTGAAGCCAGTAGTGGAATTGCTGAGTAAC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCTGACTACATTAACCAAATGCTGCTCAGGCAGTTGGAGTACAGAGAGCAGATGAGTGAGCATCACAAGCGAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTACACGTACGCGCCTTCCTACGAGGACTTTATCAAGCTCATCAACAGCAACTCTGATGTGGACTTCCTGAAGC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AGCTCAGGTATCAAATTGTAGTGGAGATAATCCAAGCAACTACAATCAGCAGCTTTCCCCAGCTGAAGAGACAC  666

Query    1  ---------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACT  53
                                 ||||||.||||||||.|||||||||||||||||||.||||||||.|||||.||
Sbjct  667  AAGGGTAAGGAATCAGCTGCCATGAAAACTGATCTCTTGAGGGCCAGGAACATGAAAAGGTACATTAACCAGCT  740

Query   54  GACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATG  127
            ||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct  741  GACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGTCCTGCCTATGACCAGCAAGAGGATG  814

Query  128  GGGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTC  201
            |.|||..||||||.||||||||||||||.|||||.|||||||||||||||||||||||..||.|||||.|.|||
Sbjct  815  GAGCCTCGGATGAAGGGGAAGGGCCTCAGAGCCAAAAGATTCTTCAGTTTGAAGATATTATGACCAATCCTTTC  888

Query  202  TACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGA  275
            ||||||||||.||||||||..|||||||||.||||.|||||..|.|||||..||.|.||||||||.||||..||
Sbjct  889  TACCGAGAGCGCTTTGGAACATACATGGAACGGATAGACAAGCGGGCTCTAGTTGGCTTTTGGGAGTCTGCCGA  962

Query  276  ACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGA  349
            |||..|.||||||||||||||||.|||||||||||||||||||.|||||||.||||||||||||||.|||||.|
Sbjct  963  ACACCTGAAGAATGCTAACAAGAGTGAAATTCCACAATTAGTTAGTGAAATGTATCAGAATTTCTTCGTGGAAA  1036

Query  350  GCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAA  423
            ||||.|||||.||.||||||||.|||||||||||||||||.||||||||||||||.|||||.|.|||.||.||.
Sbjct 1037  GCAAGGAAATCTCCGTGGAAAAGTCACTTTACAAAGAAATCCAGCAGTGTCTTGTGGGAAACAGAGGCATCGAG  1110

Query  424  GTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTATTGTCAGTGA  497
            ||.|||..|||||||||.|..|||||.|..|||...||.|.|||..||||||||||.||.||..|.|||||.||
Sbjct 1111  GTGTTCAGCAAAATCCAAGCCGATGTGTCCGAGGTGCTGAGGGAGCGGTATTACCCCTCCTTCCTCGTCAGCGA  1184

Query  498  CCTGTATGAGAA----AT---TGTTGATAAAAGAGGAAGAAAAACATGCCT----CACAGATGATTTCCAACAA  560
            ||||||||||||    ||   ||..|| |.|||||||.||       ||||    |.|||.||...||..|.||
Sbjct 1185  CCTGTATGAGAAGCTCATGCGTGAGGA-AGAAGAGGAGGA-------GCCTGACGCTCAGCTGGCCTCTGAGAA  1250

Query  561  GGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAG  634
            |||||||.||||..||.|||.|||||||||||||||.||.||   .||.||.||||.|..|.|||.|||.|.||
Sbjct 1251  GGATGAGCTGGGTTCAGGAGGTGAGGCTGGTGAGGAGGCTGT---AGAAGGCACCAGTGGGGTCAGTGATCCAG  1321

Query  635  CCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATT  708
            ||||.||||||||||.||||||.|||||.||||||||||||||||||||.||||||||||||||||.|||||||
Sbjct 1322  CCAGCTTTGCTGTAATCAAACTCCGAGAGCTAAATGAGAAACTTGAATACAAAAGGCAAGCTCTAAGTTCTATT  1395

Query  709  CAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACG  782
            ||.|||||||||||||||||.|||||||||.|||||||||||||||||||||||.|.||.||||||||||||.|
Sbjct 1396  CAGAATGCACCAAAACCTGATAAGAAGATTATTTCCAAGTTGAAGGATGAAATACTTCTGATAGAGAAAGAATG  1469

Query  783  CACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCA  856
            |||.|..||||||||||||||.||.|||||.||||||||||||||.|||||.|||.||||||.|||.|||||||
Sbjct 1470  CACGGCTCTTCAGCTGCACATGGCGAGAACAGATTGGTGGTGTGAGAACCTGGGCCTGTGGAGAGCATCCATCA  1543

Query  857  CCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTT  930
            ||||.|.||||||.||||||||||||||.||||||.||||.|||||||||||||.|||||..||||||||||||
Sbjct 1544  CCAGCGCAGAGGTGACAGAAGAGAATGGCGAGCAAATGCCTTGTTACTTTGTCAGGGTAAATCTACAAGAAGTT  1617

Query  931  GGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAG  1004
            ||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||.||||||||.||
Sbjct 1618  GGAGGAGTTGAAACTAAGAACTGGACCGTCCCAAGAAGGCTCAGTGAGTTTCAGAATTTACATCGGAAACTTAG  1691

Query 1005  TGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAA  1078
            ||||||.|||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||.|
Sbjct 1692  TGAGTGTGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTCAGTAAGCTGCCTTTCAAATCTATAGATCACA  1765

Query 1079  AGTTTATGGAAAAGTCGAAG-AATCAATTAAAT-----------------------------AAG---------  1113
            ||||..|||.|||||| ||| |||||.||||||                             |||         
Sbjct 1766  AGTTCCTGGGAAAGTC-AAGAAATCAGTTAAATGCATTTCTACAGAACCTGCTTTCAGATGAAAGACTGTTCCA  1838

Query 1114  -------------------TTTTT--------------AC----------------------------------  1120
                               |||||              ||                                  
Sbjct 1839  GAGCGAAGCACTTTATGCCTTTTTGAGCCCTTCTCCTGACTACCTCAAGGTCATTGATGTACAGGGGAAAAAGA  1912

Query 1121  ------------------------------------------------------------AGGAGGAGACAGAG  1134
                                                                        |||||||||.|||.
Sbjct 1913  CCTCCTTCTCATTGTCTTCATTTCTGGAAAAACTTCCTCGTGACTTCTTCTCCCATCAGGAGGAGGAGATAGAA  1986

Query 1135  GAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCAT  1208
            ||||||||.||||||||.|||||.||.|||||||||||.||||.|||.||..|||||||||||||.||||||||
Sbjct 1987  GAGGACAGCGACCTGTCCGATTACGGGGATGATGTGGACGGGAAGAAGGATTCCTTGGCTGAACCGTGTTTCAT  2060

Query 1209  GTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGG  1282
            |.||||.|||||||||||.|||||||||||||||||||||||||||.|||||||||||||.||.||.|||||||
Sbjct 2061  GCTGATCGGGGAGATTTTCGAACTTCGAGGAATGTTTAAATGGGTGCGAAGAACATTAATCGCTCTTGTTCAGG  2134

Query 1283  TCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTT  1356
            ||||.||||||||||||||||||||.||||||||.|||||.||.||||||||.|.|||.|||||.|||.||||.
Sbjct 2135  TCACGTTTGGAAGAACCATCAACAAGCAAATCCGCGACACGGTGAGCTGGATCTCCAGCGAGCAGATGCTGGTC  2208

Query 1357  TACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAA  1430
            ||||||||||.|..||||||||||||.|||||||||||.|||||..|||||||.||.||.|.||||.|||||..
Sbjct 2209  TACTACATCAGTGCTTTCCGGGATGCCTTTTGGCCAAACGGGAAACTGGCACCTCCAACAAGAATCCGAAGCGT  2282

Query 1431  AGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCC  1504
            .|..||.||||||||.||.||.||||||||||||||.||||||||.||.|||||||||||||..||||||||||
Sbjct 2283  GGCACAGAGTCAGGAGACGAAGCAGAGAGCACAGCAGAAGCTGCTCGAGAACATTCCAGATACACTTCAGAGCC  2356

Query 1505  TTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAG  1578
            |||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.||||..||||||||.
Sbjct 2357  TTGTTGGACAGCAAAATGCCCGCCATGGTATAATAAAAATATTCAAGGCGCTGCAAGAGACAAAGGCCAACAAA  2430

Query 1579  CATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACT  1652
            ||.|||.|.||||.|||||||||.||||||||.|..||.||.||.|||||||||||.|.|||..|.|||||..|
Sbjct 2431  CACCTGCTCTATGTGCTGATGGAGCTGCTGCTGACAGAGCTCTGCCCTGAGCTGAGGGCTCACCTGGATCAGTT  2504

Query 1653  TAAAGCTGGCCAAGTT  1668
            .||||||||||||||.
Sbjct 2505  CAAAGCTGGCCAAGTC  2520

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