Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14299
Subject:
XM_011532302.3
Aligned Length:
3147
Identities:
1666
Gaps:
1479

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCACCCCGATGCGACCGACAGTGGCGGCGCCGGCCCCAGCCCCGCGCGGGCCGCAGGCGCCGGCGGCCGTCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGTCTCGGGCTTCAGGGGCGAGCGGCGGCCGGAGTCCCCGGGGGACGCGGAGGCAGCAGCAGCGGCGGCGCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGCCCCGGGCGGCCGGAGCTGGTGGAAGCCCGTGGCGGTGGCCGCACTCGCCGCCGTGGCCCTCTCCTTCCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGCCCGGCAGCGGGGAGGCGGCGGGGGCCGCGGGGCTGAGCTCCGTCCTGTTCAGGCTCAGCCTGTACCTGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CTGCGCGGCGGCCGCCTTCCTGCTGGGGATCCTGTTTGCCCTCGTCTGCCGGAGCCCGCGCGCCCAGCCGCCCG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ACTTCGCCGCCGCCTGGAGCCGGCTGGCCGCGACCTCAGCCGCCCGCCGCCCGCCGGGGAGTCCTGTGTATGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AACTCACATGAGTCAGCTCAGTCTAGAAGGGTAGTAATTTCTCATAATATGGATAAAGCTCTGAAAGAAGTGTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGACTACAGTTATAGAGATTACATTCTGTCCTGGTATGGAAACCTCAGCAGAGATGAGGGACAACTTTACCATC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCTCTTGGAAGACTTTTGGGAAATTGCCAGACAGCTGCACCACAGACTGAGTCACGTGGATGTGGTTAAAGTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GTCTGCAATGATGTTGTGAGGACTTTACTCACTCATTTCTGTGACCTGAAAGCTGCCAATGCCAGACATGAAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACAGCCAAGACCTTTTGTGTTGCACGCATGCTTGAGGAACTCAGATGATGAAGTAAGATTTCTACAAACGTGTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTCGGGTTCTGGTGTTTTGTCTCCTCCCCTCAAAGGATGTGCAGTCTCTCAGCTTACGTATAATGCTTGCAGAA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATTCTCACAACAAAAGTCTTGAAGCCGGTAGTGGAGTTACTGAGTAATCCAGATTACATTAACCAAATGCTGCT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGCCCAGCTGGCGTACAGAGAGCAAATGAATGAGCATCACAAGAGAGCCTACACCTATGCCCCCTCTTACGAGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  ACTTCATCAAGCTCATTAACAGCAACTCTGATGTGGAGTTCTTGAAGCAACTAAGGGAAAGCGTACAAACATCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCCCTCCTGATTCTTGAACCGAACTCAGCACTTGCAAAGTCGTATCCTCCTCTGGAGAAAGAAAACCGAGTGAG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGCCAGGTATCAAATTGTAGTGGAAATAATCCAGGCGACTACAATTAGCAGCTTTCCCCAACTGAAGAGGCACA  1258

Query    1  --------------------ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG  54
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAGGTAAAGAAACTGCGGCAATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTG  1332

Query   55  ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG  128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ACTGTGGCAAAGAAGCAGTGTGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGACCAGCAAGAGGATGG  1406

Query  129  GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGA------------------------------------AGA  166
            |||||||||||||||||||||||||||||||||||                                    |||
Sbjct 1407  GGCCCTGGATGAGGGGGAAGGGCCTCAAAGCCAGAAGCAGAAGCTACAGATAGAAGGTTCAATATCTCCACAGA  1480

Query  167  TTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGAC  240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  TTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTACCGAGAGCACTTTGGAATGTACATGGAAAGGATGGAC  1554

Query  241  AAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATT  314
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAACATTTAAAGAATGCTAACAAGAATGAAATTCCACAATT  1628

Query  315  AGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAA  388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGCAAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAA  1702

Query  389  TTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTA  462
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGTATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTA  1776

Query  463  AAGGACAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACA  536
            |||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  AAGGATAGGTATTACCCTTCATTTATTGTCAGTGACCTGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACA  1850

Query  537  TGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATG  610
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  TGCCTCACAGATGATTTCCAACAAGGATGAGATGGGCCCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATG  1924

Query  611  GTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATAT  684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGTAAACAAACTGCGAGAACTAAATGAGAAACTTGAATAT  1998

Query  685  AAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGA  758
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  AAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAAAACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGA  2072

Query  759  AATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACC  832
            |||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Sbjct 2073  AATAATCCTAATAGAGAAAGAACGCACAGACCTTCAGCTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACC  2146

Query  833  TTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTT  906
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  TTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGTTACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTT  2220

Query  907  GTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTT  980
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAACTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTT  2294

Query  981  TCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGC  1054
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCTTCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGC  2368

Query 1055  TGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTAC--------  1120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 2369  TGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAAGTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTG  2442

Query 1121  --------------------------------------------------------------------------  1120
                                                                                      
Sbjct 2443  CTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTTATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGT  2516

Query 1121  --------------------------------------------------------------------------  1120
                                                                                      
Sbjct 2517  TATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTATCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCT  2590

Query 1121  ---------AGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGAC  1185
                     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  CCCACCAGGAGGAGGAGACAGAGGAGGACAGTGACCTGTCAGATTATGGTGATGATGTGGATGGGAGGAAAGAC  2664

Query 1186  GCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAG  1259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  GCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGATTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAG  2738

Query 1260  AACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGA  1333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  AACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGAACCATCAACAAACAAATCCGGGACACAGTCAGCTGGA  2812

Query 1334  TTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCA  1407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  TTTTCAGTGAGCAAATGTTGGTTTACTACATCAATATTTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCA  2886

Query 1408  CCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAA  1481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGGAAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAA  2960

Query 1482  CATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCAC  1555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  CATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAAAATGCCCGCCACGGTATAATAAAAATATTCAATGCAC  3034

Query 1556  TGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAG  1629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  TGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGCGCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAG  3108

Query 1630  CTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT  1668
            |||||||||||||||||||||||||||||||||||||||
Sbjct 3109  CTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAGTT  3147

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