Nucleotide Global Alignment

Description

Query:
ccsbBroad304_14299
Subject:
XM_017008685.2
Aligned Length:
1852
Identities:
1539
Gaps:
299

Alignment

Query    1  ATGAAAGCTGATCTCCTGAGGGCCAGGAACATGAAGAGGTACATCAACCAACTGACTGTGGCAAAGAAGCAGTG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TGAGAAGAGAATCCGAATCCTGGGAGGCCCTGCCTATGAC-----------CAGCAAGAG-----GATGGGGCC  132
                            ||.|.||.||   |||.||.|  |           |||||..||     |||      
Sbjct    1  ----------------ATGCAGGAAG---CTGTCTTT--CCTTTTGTTCCTCAGCAGAAGCTACAGAT------  47

Query  133  CTGGATGAGGGGGAAGGGCCTCAA---AGCCAGAAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTA  203
                       .|||||  .||||   ..||| .||||||||||||||||||||||||||||||||||||||||
Sbjct   48  -----------AGAAGG--TTCAATATCTCCA-CAGATTCTTCAGTTTGAAGATATCTTGGCCAATACGTTCTA  107

Query  204  CCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAAC  277
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  108  CCGAGAGCACTTTGGAATGTACATGGAAAGGATGGACAAAAGAGCTCTGATTAGTTTTTGGGAATCTGTGGAAC  181

Query  278  ATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGC  351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  182  ATTTAAAGAATGCTAACAAGAATGAAATTCCACAATTAGTTGGTGAAATTTATCAGAATTTCTTTGTGGAGAGC  255

Query  352  AAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGT  425
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  256  AAAGAAATATCTGTGGAAAAATCACTTTACAAAGAAATTCAGCAGTGTCTTGTAGGAAATAAAGGTATTGAAGT  329

Query  426  ATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGACAGGTATTACCCTTCATTTATTGTCAGTGACC  499
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct  330  ATTCTACAAAATCCAGGAAGATGTTTATGAGACCCTAAAGGATAGGTATTACCCTTCATTTATTGTCAGTGACC  403

Query  500  TGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGC  573
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  404  TGTATGAGAAATTGTTGATAAAAGAGGAAGAAAAACATGCCTCACAGATGATTTCCAACAAGGATGAGATGGGC  477

Query  574  CCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGT  647
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  478  CCAAGAGATGAGGCTGGTGAGGAAGCCGTGGATGATGGTACCAATCAGATCAATGAACAAGCCAGTTTTGCTGT  551

Query  648  AAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAA  721
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  552  AAACAAACTGCGAGAACTAAATGAGAAACTTGAATATAAAAGGCAAGCTCTAAATTCTATTCAAAATGCACCAA  625

Query  722  AACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAG  795
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  626  AACCTGACAAGAAGATTGTTTCCAAGTTGAAGGATGAAATAATCCTAATAGAGAAAGAACGCACAGACCTTCAG  699

Query  796  CTGCACATAGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGT  869
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  700  CTGCACATGGCAAGAACGGATTGGTGGTGTGAAAACCTTGGCATGTGGAAAGCCTCCATCACCAGTGGAGAGGT  773

Query  870  TACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAA  943
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  774  TACAGAAGAGAATGGTGAGCAATTGCCATGTTACTTTGTCATGGTAAGCCTACAAGAAGTTGGAGGAGTTGAAA  847

Query  944  CTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCT  1017
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  848  CTAAGAACTGGACGGTCCCCAGAAGGCTCAGCGAGTTTCAGAATTTACACCGGAAACTCAGTGAGTGCGTCCCT  921

Query 1018  TCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAA  1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  922  TCTTTAAAAAAAGTCCAGTTGCCTTCTCTTAGCAAGCTGCCTTTCAAATCTATAGATCAAAAGTTTATGGAAAA  995

Query 1092  GTCGAAGAATCAATTAAATAAGTTTTTAC---------------------------------------------  1120
            |||||||||||||||||||||||||||||                                             
Sbjct  996  GTCGAAGAATCAATTAAATAAGTTTTTACAGAATCTGCTTTCAGATGAAAGACTGTGTCAGAGTGAAGCACTTT  1069

Query 1121  --------------------------------------------------------------------------  1120
                                                                                      
Sbjct 1070  ATGCCTTCTTGAGCCCTTCTCCTGACTACCTCAAGGTTATCGACGTGCAGGGGAAAAAAAATTCTTTTTCATTA  1143

Query 1121  ----------------------------------------------AGGAGGAGACAGAGGAGGACAGTGACCT  1148
                                                          ||||||||||||||||||||||||||||
Sbjct 1144  TCCTCATTTTTGGAAAGACTTCCTCGCGACTTCTTCTCCCACCAGGAGGAGGAGACAGAGGAGGACAGTGACCT  1217

Query 1149  GTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGA  1222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1218  GTCAGATTATGGTGATGATGTGGATGGGAGGAAAGACGCCTTGGCTGAACCATGTTTCATGTTGATTGGGGAGA  1291

Query 1223  TTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGA  1296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292  TTTTTGAACTTCGAGGAATGTTTAAATGGGTGAGAAGAACATTAATTGCCCTCGTTCAGGTCACTTTTGGAAGA  1365

Query 1297  ACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATAT  1370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1366  ACCATCAACAAACAAATCCGGGACACAGTCAGCTGGATTTTCAGTGAGCAAATGTTGGTTTACTACATCAATAT  1439

Query 1371  TTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGG  1444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440  TTTCCGGGATGCTTTTTGGCCAAATGGGAAGTTGGCACCACCGACCACAATCAGAAGCAAAGAGCAAAGTCAGG  1513

Query 1445  AAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAA  1518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1514  AAACAAAACAGAGAGCACAGCAAAAGCTGCTTGAAAACATTCCAGATATGCTTCAGAGCCTTGTTGGACAGCAA  1587

Query 1519  AATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGC  1592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588  AATGCCCGCCACGGTATAATAAAAATATTCAATGCACTGCAAGAAACAAGAGCCAACAAGCATCTGTTATATGC  1661

Query 1593  GCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAG  1666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1662  GCTGATGGAACTGCTGCTAATTGAACTGTGTCCTGAGCTGAGAGTTCATTTAGATCAACTTAAAGCTGGCCAAG  1735

Query 1667  TT  1668
            ||
Sbjct 1736  TT  1737

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