Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14378
- Subject:
- XM_017003392.1
- Aligned Length:
- 1812
- Identities:
- 1313
- Gaps:
- 495
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTGTGCAGCTTCTGCTTCTCCAGATAATCTGGTATTCCATATGAAAAATGAGATGAGAAACATCAAGTACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACCAGTAGACTATCAACAATTGCGTGCATTAACTGAAGCAAAGAAATTGGCTTCTGCCTCTGCAAAGCTAAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCAGAAAAGCAATGTTGACTTCAAAGTTATCCAAAGAACAAACACTAATAAAACAACACAAGCAAGTGTGGTGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CAGGAATACCAGAGGCTGAATGAAGTCAGATGTAAAATGGAATCTGAAATAAAATCCCTTCTCAATGAAGAGAA 296
Query 1 --------ATGAATGTCTTTGTGACCTTACAAATTTT------------------------------------- 29
|||||||||||||||||||||||||||||
Sbjct 297 CATTGGAAATGAATGTCTTTGTGACCTTACAAATTTTGAGCAAGAGCTATCAGAACAACAGTGCACATATCTTA 370
Query 30 -------------------------------------------------------------------------- 29
Sbjct 371 AAAATGTAATAAATCCTATTCAGCAGCTGAGAGCAGATCTAAAATACAGACAGCATCACACTTTGCAGCATTCA 444
Query 30 -----------------------------------------GGTTGACTTTGTGAAGAAACAATTGAAAACTGT 62
|||||||||||||||||||||||||||||||||
Sbjct 445 CACCCACATATTGAGTTTAACTCCATGAAAGTATTGGAAGAGGTTGACTTTGTGAAGAAACAATTGAAAACTGT 518
Query 63 CTTTGAAAGACTTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATC 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTTGAAAGACTTAGGCTGGAGCAACAGAGAATAGAAAATGATCTTTCAGACTGGAGTATAAAGATTCTAGATC 592
Query 137 ATTCTTTGGAAGAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCT 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATTCTTTGGAAGAAAAGACTAACCCGCTTAGTGAACTGCCCATTGAATTAGAAAGTTTGGAATGCCCATACCCT 666
Query 211 GATTTGAAATCTTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAA 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GATTTGAAATCTTCAATTCTCAGTGAGTTCTATAAGTTTACACAGAAATATCAGAAGAAGCTTCAAGACTTTAA 740
Query 285 TCTGCAGTTGGAAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGG 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TCTGCAGTTGGAAGACATATACAGAAACTGTCAACTAAGTGAAGAAGACCACTGGATTTACCAGGCTATTTTGG 814
Query 359 ATCAGTACCCTGGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCAGTACCCTGGAGATCTCTTTGGAAGAAGGACTCTGTATCTGGACATGTTACAAAGATATTTTCCTCACAAA 888
Query 433 TCTAGGCATGATTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCT 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TCTAGGCATGATTTGGTTGAACACGAGAAATATTGTGACCAATATCGCTTTGCTATAGAGCAGCAAAATATCCT 962
Query 507 GATATCAAATTGGAATAAAAATAGGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAA 580
|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GATATCAAATTGGAATAAAAATAAGAAAGACTTTATACAGAAGGCTGTGCTGACACTCACTGAGGCTTGTGCAA 1036
Query 581 CACATGAAATGGAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAA- 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CACATGAAATGGAGAGCATGTTGGCTAAGGACAAGAAAAAGCAACAGGAATTGTGTGCTGATCTGAAAGCCAAG 1110
Query 654 --------------------------------------GGTTCGTCAATGGCGAGCCCACCAAGAAGAGGTAGC 689
||||||||||||||||||||||||||||||||||||
Sbjct 1111 GAAGTGATTCTATTCAGAGATAACCAATATCATTATTTGGTTCGTCAATGGCGAGCCCACCAAGAAGAGGTAGC 1184
Query 690 AAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGAAAGAGAAACTGTGGAAGAAGAAGG 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AAGACTGGAAATGGAAATTTCTGCCAGAAGAAGAGAAAAGGAAGAGGAGAAAGAGAAACTGTGGAAGAAGAAGG 1258
Query 764 AATTGTTGCAAAGAGCAGAGAAGAAAAAAAGCATAAAAAAATACTGGGCCAAGAAAAAACAGAAGTGGCAAGAA 837
||||||||||||||||||||||||||||||..||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AATTGTTGCAAAGAGCAGAGAAGAAAAAAAAAATAAAAAAATACTGGGCCAAGAAAAAACAGAAGTGGCAAGAA 1332
Query 838 ATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGCTGAACAGTCACTAAAAGACAGAGA 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 ATGGAAATGAGAGATCTTCAGCGTCTAGAAGAACTGAAGAAATTAATCGCTGAACAGTCACTAAAAGACAGAGA 1406
Query 912 AAGGGTTAAATATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTC 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AAGGGTTAAATATAGACAAGAATTATTGGAAAGGCGTTTGATGGAGAAAAAGGAAGTGGCCCTTCAAGAAGCTC 1480
Query 986 ATGAAGACAAAGAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCT 1059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ATGAAGACAAAGAGAGAGCACGGCGGCTAGAAGCCCTTAGGAAACAGGTTGCTGTTGTTGCTCAATTTGATCCT 1554
Query 1060 GTTAGAATGATGTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGAAATTGAAGAAGAATTTATTCTTCA 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 GTTAGAATGATGTCAGATACAATGGCATCAAAAGCTAGAATGGGCATTGAAATTGAAGAAGAATTTATTCTTCA 1628
Query 1134 AAAGCCACTCTTCACATTGAATACATACAATGAACAGCAGATAATTTCTGACCCTAGACTTCGCTTCGAGTTAG 1207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 AAAGCCACTCTTCACATTGAATACATACAATGAACAGCAGATAATTTCTGACCCTAGACTTCGCTTCGAGTTAG 1702
Query 1208 CACTTCGAGAAGCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTACCAAAAATTAGTCCTCAAAAACCT 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACTTCGAGAAGCTGGACTTCATAGAACACTTTATGCTAAAGAGATATTACCAAAAATTAGTCCTCAAAAACCT 1776
Query 1282 CCAAGAAAGGACATGGAGTCTACTGTATTGAAAATA 1317
|||||||||||||||||||||||||||||.||||||
Sbjct 1777 CCAAGAAAGGACATGGAGTCTACTGTATTTAAAATA 1812
