Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14427
- Subject:
- NM_001330585.2
- Aligned Length:
- 2564
- Identities:
- 1579
- Gaps:
- 976
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGATGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGGCCGCTGCCAAGCAGATGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTCTTTATGGAGTTTGGCCCTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAGATGATGAGGACCTGGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTGAGCTGCTGGCTCTCACAGGGGAAGCACAAACCACAGGCAAGAAGCCAGCACCCAAGGGGCAGGCCCCCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCATGGCCCACATCGAGAAGTTGGCGGCAGACTGTATGCGGGATGTGGAGGAGGAGGAGGAGGAGGAAGGGCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAGGAAGATGCAGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGTGGACGAGGAGACTGAGCCCCTGGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAGGAGAACGGCCTAGAAGACACTGAACCTCCAGTGCAGACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGCCGGAGCATCTCAGGGGCTACACGCTTTGCTGGAGGAACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GATTCACAACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAGCCAGGCGCTGCGAGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGGCCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTGAGGAGAGGCAGAAAGATCAATGAGGATGAGATCCCA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCCAGTGGCCTTAGGAAAGCGGCCCCTGGCCCCCCAGGAACCAGCCAACAGGAGCCCTGAGACAGACCCTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCTCCCTGGCATTTCTGCCCAGCCCG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTTCAGACTTAGACCCAGACCCGCGGGCCCTGCTGTCATCCCGACAGAGAGAGTACAAAGTGGCTGCCCTCAGT 888
Query 1 ---------------------------------------ATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGA 35
|||||||||||||||||||||||||||||||||||
Sbjct 889 GCCAAGCGGGCTGGAGAGCTAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGA 962
Query 36 GGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAGCCCCAGCAGG 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAGCCCCAGCAGG 1036
Query 110 CTTCTCAGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGAC 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTTCTCAGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGAC 1110
Query 184 GTCCCAGCAACCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTA 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTCCCAGCAACCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTA 1184
Query 258 CCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAGC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAGC 1258
Query 332 AATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGGA 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGGA 1332
Query 406 TTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCTGC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCTGC 1406
Query 480 AGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGGGTGAGCCCCCAGCACAGG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 AGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGGGTGAGCCCCCAGCACAGG 1480
Query 554 CCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGT 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGT 1554
Query 628 TCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGAGGCACGGAAACTGCAGTATCAGCG 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 TCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGAGGCACGGAAACTGCAGTATCAGCG 1628
Query 702 GGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAATGGCTTG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAATGGCTTG 1702
Query 776 AGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTTGACGGATGAG 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 AGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTTGACGGATGAG 1776
Query 850 GAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCT 923
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCT 1850
Query 924 GCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGG 997
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 GCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGG 1924
Query 998 CTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCT 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCT 1998
Query 1072 CAGGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAA 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CAGGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAA 2072
Query 1146 CAGCACAGAAATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACC 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGCACAGAAATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACC 2146
Query 1220 TGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGGTG 1293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGGTG 2220
Query 1294 AAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAGAG 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAGAG 2294
Query 1368 GGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGGTTG 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGGTTG 2368
Query 1442 GCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGATGGA 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 GCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGATGGA 2442
Query 1516 AGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGCCGATGGCCAGCACCAGGAG---ATGAGTCAGGCCGCGACT 1586
|||||||||||||||||||||||||||||||||..|| .||..|.|||| .||||| ||||..|| |
Sbjct 2443 AGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGGTGA-----GGCTGCGGGAGCCTCTGAGT--GGCCAGGA-T 2508
Query 1587 GTGCAG---------GAGA----------------------------- 1596
|||||| ||||
Sbjct 2509 GTGCAGATGGTCACTGAGAACTGGCTGGTTCTGGAGCCCAGGGGCTTG 2556
