Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14427
- Subject:
- NM_177045.3
- Aligned Length:
- 2567
- Identities:
- 1361
- Gaps:
- 994
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCCAGGGCCAAGACCTCGGAAGGGCCCTAAGACCAGTGGCCAGGGTGCTGAGACTGCCAAGCAGCTGGGGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTTGTGGAGTTCAACCCTGAGGACATGCTCCTGGGGGTGGATGAGACTGAAGATGATGGAGACCTGGAGGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGTTACTGGCACTCACAGGGGAAACAGCGAGCAGGAGCAGGAAGCCAGCACCCAAGGGGCAGGCTCCACTGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATGGCCCACATTGAGAAGCTGGCAGCAGACTGTATGCGAGATGTGGAGGAGGATGAAGAAGAGGAAGGGCTGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGACGATGCAGACCTTCTGACAGAGCTGCAGGAGGTCCTGGGTGAGGATGAAGAAGCGGGTCTGCTGGACGGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGAGGCAGCAAGTCCAGACCTCTGTGAGGAGAAGACTTGGGACAACACTGAACTACCTGTAGAGCAGGCAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCCAACAGGCAGTACCTGCTGCAGCTCAGGCTGGAGGGCCTCGGGGGCTGCAGGCTTTGCTGGAGGAACGGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCGTAACTACCGGGAGGCCGCAGCCAGTGCCAAGGAGGCTGGTGAAGCTGCCAAAGCCCGGCGCTGTGAGCGAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTAAAGACTCTGCAGTCCCAGCTTGCCACTGTGAGGAAAGGCGGGAAGATCTGTGAGGATGAGATCCCACCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGTAGCCTTGGGCAAAAGGCCCCCAGCCCCCCAGGAAAGAGCCATCAAGAACCCTGAGATAGACTCTCCAGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCCTGTGCCATGGAGCCAGGCAACCTTTCCCAGCCCGAGTCCAGCCTCCCTGCCATTGCTCCCTTGCCTGATT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CAGACCCAGACCCACAAGCCCTGCTGTTAGCCCGACAGAGAGAGTACAAGGCGGCTGCTCTCGATGCCAAGCGG 888
Query 1 ------------------------------ATGAGGATTGGGAAGAGATTCGGTGCTGTCCTGGAGGCCCTGGA 44
||||||||.|||||||||||.|||.|||||||.|||||||||||
Sbjct 889 GCTGGAGATCTAGACCGTGCTCGGGAGCTCATGAGGATCGGGAAGAGATTTGGTACTGTCCTAGAGGCCCTGGA 962
Query 45 GAAGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATCTGAAG-----CCCCAGCAGGCTTC 113
.|||||.|||||.|||||.|||||||.|||||||||.|||||||.|||||||||| |||| ||||||||
Sbjct 963 AAAGGGTCAGCCTGTGGACCTGAGTGGCATGCCCCCAGCACCTGCGGATCTGAAGGCCCTCCCC--CAGGCTTC 1034
Query 114 TCAGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCAGTGATGGCCCCTGACGTCC 187
|.||||..||.|||||.||..||.|.|..|||||||.||.||||.|.|||||||||||||||||.|||||.|||
Sbjct 1035 TAAGGCCTCCTCAGCAACCCAAGGCCTGTCCCCAGCAGTAGAGCAAATGCAGCCAGTGATGGCCTCTGACCTCC 1108
Query 188 CAGCAACCCCAGTGGCCCCTACAGAGTC-ACAGACAGTGCTGGATGCCCTGCAGCAGAGGCTGAACAAGTACCG 260
||||.|||||||||||||||.|.|||.| ||| ||||||||||||||..|.|||||.||||||||||||||.||
Sbjct 1109 CAGCCACCCCAGTGGCCCCTGCGGAGCCAACA-ACAGTGCTGGATGCTTTACAGCAAAGGCTGAACAAGTATCG 1181
Query 261 CGAGGCGGGCATCCAGGCCCGGAGTGG----TGGGGACGAGCGCAAGGCTCGGATGCATGAGCGCATTGCCAAG 330
.|||||.|||||||||||||| || ||||||.|||||||||||..|||||||.||.||||||||||||
Sbjct 1182 TGAGGCAGGCATCCAGGCCCG----GGCCAATGGGGATGAGCGCAAGGCCAGGATGCACGATCGCATTGCCAAG 1251
Query 331 CAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTGCCTGTTCCTCCAGG 404
||||||||.||||||.|||||||.||.|..|||||||.||||||..|||||||.||.||.||||||||||||||
Sbjct 1252 CAATATCAGGATGCTGTTCGAGCTCATCAGGCAGGACAGAAAGTTGACTTTGCCGAGTTACCTGTTCCTCCAGG 1325
Query 405 ATTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGCGACATTGGCAGCTG 478
||||||.||||||||||||||||||.|||..|..|||..||||.||||..||||||||||.||.||.|||.|||
Sbjct 1326 ATTTCCTCCCATCCCTGGCCTGGAGCCCAGGAAAGGTAGTGAGCAGGATTCAGTGGCAGCAACTTTAGCAACTG 1399
Query 479 CAGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGGGTGAGCCCCCAGCACAG 552
|..|.|||||||||| ||||.|||.||||||.||..||| |||||.||.|||.||||..|.|||||||||
Sbjct 1400 CCCAAAAACTGGCCT---CAGAAGATGCAGCCCTGGTAGAT---GACGACGAGGAGAGTGACACTCCAGCACAG 1467
Query 553 GCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCATCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAG 626
||||||.||||||||||.||.||.|.|.|....|||.||.|||||||.|..|||.|||||||||.|||.|||||
Sbjct 1468 GCCCCATTGGCCAAGAAGCCAGCGCAGACTCTGGTCTCTCCATCCCATCTTCTGACTGAGCCCAAGGCTTCAAG 1541
Query 627 TTCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGCACTGCTGGAGGCACGGAAACTGCAGTATCAGC 700
||||||||||||||.||||||||||||.|||||||||.||.|||||||||||||.|||||||||||.||.||||
Sbjct 1542 TTCTAAGGAGTCACTGAGTCCATCTGTTCGGGAGCAGGTGACACTGCTGGAGGCTCGGAAACTGCAATACCAGC 1615
Query 701 GGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGGCCAAAGCCTATCTGCGGGTAGCCAAATGGCTT 774
|.|||||.|||||.|||||||||||.|||||.||.||||||||||||.||.|..|.||.|||||.|||.|.|||
Sbjct 1616 GAGCAGCTCTGCAAGCCAAGCGCAGGCAGGATCTTGAGCAGGCCAAATCCCACTTACGAGTAGCTAAAAGTCTT 1689
Query 775 GAGGCTCAGATCATCCAGGCCCGATCTGG-CAGACCTGTTGATCTGTCCAAGGTGCCTTCGCCCTTGACGGATG 847
||||||||||||||||||||||||.|||| || |||..|||||||.||||||||||||||.||.|||||.||||
Sbjct 1690 GAGGCTCAGATCATCCAGGCCCGAGCTGGTCA-ACCCATTGATCTCTCCAAGGTGCCTTCACCGTTGACAGATG 1762
Query 848 AGGAGGGTGACTTCATCCTCATCCACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAG 921
|.|||||.||||||||||||||.|||||||||||.||||||||||||||||||||.||||||||||||||||||
Sbjct 1763 AAGAGGGGGACTTCATCCTCATTCACCATGAGGATCTGCGACTCTCCCAGAAGGCTGAGGAGGTGTATGCCCAG 1836
Query 922 CTGCAAAAAATGCTTCTGGAGCAACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGT 995
||.||.||||||||.|.||||||.||||.||||||||||||.|||||||||||||.||||||||||||.||.||
Sbjct 1837 CTACAGAAAATGCTCCAGGAGCAGCAAGCGAAGTGCCTGCTATTCTCCAAGCAGTACATGCACCAGGGAAATGT 1910
Query 996 GGCTGAGACCACCCGATTTGAGAAGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGG 1069
||||||||||||.||.|||||||.||||||..|||||||.|||||||||||.||||||||||||||.|||||.|
Sbjct 1911 GGCTGAGACCACTCGGTTTGAGAGGCTTGCGGAGGACCGAAAGAAACAGCTTGAGATCCTGCAGCTAGCCCAAG 1984
Query 1070 CTCAGGGCCTCGACCCTCCCACCCACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTC 1143
|.||||||||.||||||||.|..||.|||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1985 CCCAGGGCCTTGACCCTCCTAGTCATCACTTTGAGCTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTC 2058
Query 1144 AACAGCACAGAAATGCATCTGATCATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGA 1217
||||||||||||||||||||||||||.||.|||||||||||||||||||||||.|||||.||||||||.|||||
Sbjct 2059 AACAGCACAGAAATGCATCTGATCATCGTGCGGGGAATGAACCTCCCAGCCCCGCCAGGAGTGACTCCGGATGA 2132
Query 1218 CCTGGATGCTTTTGTGCGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGG 1291
|.|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 CTTGGATGCTTTTGTACGGTTTGAGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGG 2206
Query 1292 TGAAGAACACAAACTCTCCAGAATTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAG 1365
|.||.||.||.||.||||||||||||||.|||.|.|||||.|||||||||||.|||||||||||.|||||.|.|
Sbjct 2207 TAAAAAATACCAATTCTCCAGAATTTGAACAAGTTTTCAAGCTAAACATCAATCGAAACCACCGAGGCTTTAGG 2280
Query 1366 AGGGTGATCCAGAGCAAAGGCATCAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGGT 1439
||.|||||||||||||||||.|||||.||||||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 2281 AGAGTGATCCAGAGCAAAGGAATCAAATTTGAGATCTTCCACAAAGGATCCTTTTTTAGAAGTGACAAGCTGGT 2354
Query 1440 TGGCACAGCACACCTGAAACTGGAGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGATG 1513
|||||||||||||.|||||.||||..||||||||||.|||||||||||||||||.||..|||||||..||||||
Sbjct 2355 TGGCACAGCACACTTGAAATTGGAAAGGCTGGAGAAGGAGTGTGAGATCAGAGAGATCATGGAGGTTTTGGATG 2428
Query 1514 GAAGGAAGCCCACCGGGGGGAAGCTGGAGGTGAAGCCGATG--------GCC----AGCA-CCAGGAGATGAGT 1574
|.||.||||||||.|||||||||||||||||||||..||.| ||| |||| ||||||..||
Sbjct 2429 GCAGAAAGCCCACTGGGGGGAAGCTGGAGGTGAAGGTGAGGCTTCGGGAGCCTCTGAGCAGCCAGGACGTG--- 2499
Query 1575 CAGGCCGCGACTGTGCAGGAGA----------------------------- 1596
|||.|.|..||| ||||
Sbjct 2500 CAGACGGTCACT------GAGAACTGGCTGGTCCTGGAGCCTCGGGGCCTG 2544
