Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14427
- Subject:
- XR_001737029.1
- Aligned Length:
- 2798
- Identities:
- 1276
- Gaps:
- 1522
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCGCGCTGCGAACCCCGCCCCGGTGTCACCTGTTGGAGCCCCCCGCCCGCGTAGCCGTGCACATGCGCACTGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGGCCGCCGGCCAGTGGGGTCACGTGTTGCGCGCGAGCCACCTCCCCTGCTGGCGCTTCCTGTCGCTACCGCTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGGCCCAGGGCCCGCGGGAGCCCAGGGCGGTGCCGGGTGAGACAAGGCCGGGGTTTGGCTCGGATTCACCGCGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGTATCTAGGCTGCCATGATGCCAGGGCCAAGACCTCGGAAGGGCCCTCAGGCCAGAGGCCAAGGGGTGGCCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGCCAAGCAGATGGGGCTCTTTATGGAGTTTGGCCCTGAGGACATGCTGCTGGGCATGGATGAGGCTGAAGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGAGGACCTGGAGGCTGAGCTGCTGGCTCTCACAGGGGAAGCACAAACCACAGGCAAGAAGCCAGCACCCAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGGCAGGCCCCCCTGCCCATGGCCCACATCGAGAAGTTGGCGGCAGACTGTATGCGGGATGTGGAGGAGGAGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGAGGAGGAAGGGCTGGAGGAAGATGCAGAGCTGCTGACGGAGCTGCAGGAGGTCTTAGGTGTGGACGAGGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGAGCCCCTGGATGGTGATGAGGTAGCTGACCCAGGCGGCTCTGAGGAGGAGAACGGCCTAGAAGACACTGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCCAGTGCAGACAGCCGTCCTGACAGCTTCAGCCCCAGCAGCTCAGGCCGGAGCATCTCAGGGGCTACACGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGCTGGAGGAACGGATTCACAACTACCGAGAGGCTGCGGCCAGTGCCAAGGAGGCAGGCGAAGCAGCCAAAG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAGGCGCTGCGAGCGCGGCCTGAAGACCTTGGAGTCGCAGCTAGCCTCTGTGAGGAGAGGCAGAAAGATCAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGGATGAGATCCCACCTCCAGTGGCCTTAGGAAAGCGGCCCCTGGCCCCCCAGGAACCAGCCAACAGGAGCCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAGACAGACCCTCCAGCTCCCCCTGCCTTGGAGTCAGACAACCCCTCCCAACCTGAGACCAGCCTCCCTGGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTCTGCCCAGCCCGTTTCAGACTTAGACCCAGACCCGCGGGCCCTGCTGTCATCCCGACAGAGAGAGTACAAA 1110
Query 1 ------------------------------------------------------ATGAGGATTGGGAAGAGATT 20
||||||||||||||||||||
Sbjct 1111 GTGGCTGCCCTCAGTGCCAAGCGGGCTGGAGAGCTAGACCGTGCCCGAGAGCTCATGAGGATTGGGAAGAGATT 1184
Query 21 CGGTGCTGTCCTGGAGGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATC 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CGGTGCTGTCCTGGAGGCCCTGGAGAAGGGGCAGCCCGTGGATCTGAGTGCCATGCCCCCGGCACCTGAGGATC 1258
Query 95 TGAAGCCCCAGCAGGCTTCTCAGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCA 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGAAGCCCCAGCAGGCTTCTCAGGCTCCCACAGCACCCTCAGTCATTCCCCCAGCCGTGGAGCGAGTGCAGCCA 1332
Query 169 GTGATGGCCCCTGACGTCCCAGCAACCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCA 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GTGATGGCCCCTGACGTCCCAGCAACCCCAGTGGCCCCTACAGAGTCACAGACAGTGCTGGATGCCCTGCAGCA 1406
Query 243 GAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GAGGCTGAACAAGTACCGCGAGGCGGGCATCCAGGCCCGGAGTGGTGGGGACGAGCGCAAGGCTCGGATGCATG 1480
Query 317 AGCGCATTGCCAAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTG 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGCGCATTGCCAAGCAATATCAAGATGCTATTCGAGCACACCGAGCAGGACGGAAAGTCAACTTTGCTGAATTG 1554
Query 391 CCTGTTCCTCCAGGATTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGC 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTGTTCCTCCAGGATTTCCCCCCATCCCTGGCCTGGAGTCCACTATGGGTGTTGAGGAGGACGCAGTGGCAGC 1628
Query 465 GACATTGGCAGCTGCAGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACG------ 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GACATTGGCAGCTGCAGAGAAACTGGCCTCTGCAGAGGATTCAGCCCCGGCTGATAAAGACGAGGACGAGCCTC 1702
Query 533 ------------AGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCA 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CTGGGCACCTGCAGGGTGAGCCCCCAGCACAGGCCCCAGTGGCCAAGAAACCTGCACGGCCCACAGTCCCTTCA 1776
Query 595 TCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGTTCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGC 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCCCAGCGCCTGCCTGAGCCCAGGGCCTCAAGTTCTAAGGAGTCACCGAGTCCATCTGTGCGGGAGCAGCTGGC 1850
Query 669 ACTGCTGGAGGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGG 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACTGCTGGAGGCACGGAAACTGCAGTATCAGCGGGCAGCCCTGCAGGCCAAGCGCAGCCAGGACCTGGAGCAGG 1924
Query 743 CCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGAT 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 CCAAAGCCTATCTGCGGGTAGCCAAATGGCTTGAGGCTCAGATCATCCAGGCCCGATCTGGCAGACCTGTTGAT 1998
Query 817 CTGTCCA--------------------AGGTGCCTTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATC 870
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CTGTCCAAGGGGCCTTGTGACCTGGGTAGGTGCCTTCGCCCTTGACGGATGAGGAGGGTGACTTCATCCTCATC 2072
Query 871 CACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCA 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CACCATGAGGACCTGCGACTCTCCCAGAAGGCGGAGGAGGTGTATGCCCAGCTGCAAAAAATGCTTCTGGAGCA 2146
Query 945 ACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGA 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 ACAAGAGAAGTGCCTGCTGTTCTCCAAGCAGTTCATGCACCAGGGCAACGTGGCTGAGACCACCCGATTTGAGA 2220
Query 1019 AGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCTCAGGGCCTCGACCCTCCCACC 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGCTTGCTCAGGACCGCAAGAAACAGCTGGAGATCCTGCAGCTGGCCCAGGCTCAGGGCCTCGACCCTCCCACC 2294
Query 1093 CACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAACAGCACAGAAATGCATCTGAT 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CACCACTTTGAGTTGAAGACATTCCAGACTGTGAGGATCTTCTCAGAACTCAACAGCACAGAAATGCATCTGAT 2368
Query 1167 CATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACCTGGATGCTTTTGTGCGGTTTG 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 CATTGTCCGGGGAATGAACCTCCCAGCCCCTCCAGGGGTGACTCCCGATGACCTGGATGCTTTTGTGCGGTTTG 2442
Query 1241 AGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAAGCAAAACAGCTGTGGTGAAGAACACAAACTCTCCAGAA 1314
||||||||||||||||||||||||||||||||||||
Sbjct 2443 AGTTTCACTACCCTAACTCGGACCAGGCTCAAAAAA-------------------------------------- 2478
Query 1315 TTTGATCAACTCTTCAAACTAAACATCAACCGAAACCACCGGGGCTTCAAGAGGGTGATCCAGAGCAAAGGCAT 1388
Sbjct 2479 -------------------------------------------------------------------------- 2478
Query 1389 CAAGTTTGAGATCTTCCACAAAGGGTCCTTCTTCAGAAGCGACAAGCTGGTTGGCACAGCACACCTGAAACTGG 1462
Sbjct 2479 -------------------------------------------------------------------------- 2478
Query 1463 AGCGGCTGGAGAATGAGTGTGAGATCAGAGAAATTGTGGAGGTCCTGGATGGAAGGAAGCCCACCGGGGGGAAG 1536
Sbjct 2479 -------------------------------------------------------------------------- 2478
Query 1537 CTGGAGGTGAAGCCGATGGCCAGCACCAGGAGATGAGTCAGGCCGCGACTGTGCAGGAGA 1596
Sbjct 2479 ------------------------------------------------------------ 2478
