Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14449
- Subject:
- NM_001365659.1
- Aligned Length:
- 1816
- Identities:
- 422
- Gaps:
- 1352
Alignment
Query 1 ATGGACAAGGGAAGAGAGAGAATGGCCGCTGCCGCCGCCGCTGCTGCCGCCGCCGCCGCCGCCGCTCAGTGCCG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GAGCCCTCGGTGCGCGGCGGAGAGAAGAGGATTCCGGCGGGAACTCGACTCTTGGCGCCACCGCCTCATGCACT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GTGTAGGTTTTGAGAGTATTTTAGAAGGGCTTTATGGACCACGGCTACGAAGAGACCTCAGTTTATTTGAAGAC 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TGTGAACCAGAAGAGCTGACTGACTGGTCTATGGATGAAAAATGTTCATTTTGTAACCTACAGAGAGAAGCAGT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 CAGTGATTGTATACCATCTCTTGATTCTTCACAGTCAACACCAACAGAGGAGCTATCATCTCAGGGCCAGTCCA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 ACACTGATAAGATTGAATGCCAAGCAGAAAATTACCTAAATGCACTCTTTCGAAAGAAAGATCTTCCTCAGAAC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TGTGATCCTAACATTCCCCTAGTTGCTCAGGAATTAATGAAAAAGATGATACGTCAATTTGCGATTGAGTACAT 518
||||||||||||||||||||||||||||||||||||||
Sbjct 1 ------------------------------------ATGAAAAAGATGATACGTCAATTTGCGATTGAGTACAT 38
Query 519 TTCAAAAAGTGGTAAAACTCAAGAGAATAGAAATGGTTCAATTGGACCAAGTATAGTATGTAAAAGTATCCAAA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 39 TTCAAAAAGTGGTAAAACTCAAGAGAATAGAAATGGTTCAATTGGACCAAGTATAGTATGTAAAAGTATCCAAA 112
Query 593 TGAATCAAGCAGAAAACTCCCTTCAGGAAGAGCAGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGCAAGAA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 113 TGAATCAAGCAGAAAACTCCCTTCAGGAAGAGCAGGAAGGCCCCTTAGACCTCACTGTGAATCGAATGCAAGAA 186
Query 667 CAAAATACTCAGCAAGGGGATGGAGTGTTAGATCTCTCTACAAAGAAAACCAGCATAAAATCTGAAGAGTCATC 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 187 CAAAATACTCAGCAAGGGGATGGAGTGTTAGATCTCTCTACAAAGAAAACCAGCATAAAATCTGAAGAGTCATC 260
Query 741 CATATGTGATCCTTCTTCTGAAAATTCAGTGGCTGGCATGCTACA-------AGTGAAAACTGATGAGAAA--- 804
||||||||||||||||||||||||||||||||||||.|..||||| ||.||..||| |||.|.||
Sbjct 261 CATATGTGATCCTTCTTCTGAAAATTCAGTGGCTGGGAGACTACACAGAAACAGAGAGGACT-ATGTGGAAAGA 333
Query 805 ----CTGAATGTGTCTGATG-------------AG------AATACAGCAAGT-TGCCCTTTGAGCCC----CA 850
||||.|.|| |.|||| || ||.|||...||| || ||||.| ||
Sbjct 334 AGTGCTGAGTTTG-CAGATGGTTTGCTCTCAAAAGCTTTGAAAGACATTCAGTCTG------GAGCACTGGACA 400
Query 851 TTAA----------------GATG---TGCCTTAA-----------TCGTCCCATTGA------------ATGG 882
|.|| .||| |.|||.|| ||.||.|.|.|| |.||
Sbjct 401 TAAATAAAGCAGGCATACTTTATGGCATACCTCAAAAAACTTTACTTCTTCACTTAGAAGCCTTACCAGCAGGG 474
Query 883 AA-TCTGAA---TTTGACAACAGCATCTC-------------------------TAACGAGCTGTACAG----- 922
|| .|||.| |||.|.|||| .|.||| |||.|| |.|||.||
Sbjct 475 AAGCCTGCATCTTTTAAAAACA-AAACTCGAGATTTCCATGATAGTTATTCATATAAGGA-CAGTAAAGAAACT 546
Query 923 ----------TTCATAA-------------CCAAAATCTCA---AAAGCGAAGAGAAA---------------- 954
|.||.|| .|||.|.|||| |.||||.|.|||||
Sbjct 547 TGTGCAGTGCTGCAAAAAGTAGCCTTGTGGGCAAGAGCTCAAGCAGAGCGCACAGAAAAAAGTAAACTCAATCT 620
Query 955 -------------------------------------------------------------------------- 954
Sbjct 621 ACTTGAAACCTCAGAAATAAAATTCCCAACAGCTTCCACTTACCTCCATCAGCTAACTCTACAGAAAATGGTCA 694
Query 955 -------------------------------------------------------------------------- 954
Sbjct 695 CTCAGTTTAAAGAAAAAAATGAAAGCCTCCAATATGAAACTTCAAATCCTACTGTACAGTTAAAAATTCCTCAG 768
Query 955 -------------------------------------------------------------------------- 954
Sbjct 769 CTACGAGTAAGTTCTGTCTCAAAATCACAACCTGATGGTTCTGGTCTGTTGGATGTTATGTATCAAGTTTCCAA 842
Query 955 -------------------------------------------------------------------------- 954
Sbjct 843 AACCTCTTCAGTCCTAGAAGGATCAGCTCTCCAAAAACTGAAAAATATACTCCCTAAACAGAACAAAATAGAAT 916
Query 955 -------------------------------------------------------------------------- 954
Sbjct 917 GTTCTGGGCCTGTAACTCACTCAAGTGTTGACTCTTACTTTCTACATGGGGACCTCTCTCCTTTGTGTCTTAAT 990
Query 955 -------------------------------------------------------------------------- 954
Sbjct 991 TCTAAAAATGGAACAGTTGATGGAACCTCTGAAAATACTGAAGATGGATTAGATCGAAAAGACAGTAAGCAGCC 1064
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1065 CAGGAAAAAACGTGGCCGCTATCGGCAATATGATCATGAAATAATGGAAGAAGCTATTGCAATGGTAATGAGCG 1138
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1139 GAAAAATGAGTGTTTCCAAAGCACAAGGAATTTATGGGGTACCTCACAGCACTTTAGAATACAAGGTAAAAGAA 1212
Query 955 -------------------------------------------------------------------------- 954
Sbjct 1213 AGATCTGGAACACTGAAGACTCCTCCGAAGAAGAAACTACGATTACCAGACACTGGGTTATATAATATGACAGA 1286
Query 955 ---------------------------------------- 954
Sbjct 1287 TTCAGGGACTGGCAGCTGCAAAAACAGCAGCAAGCCTGTG 1326
