Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14451
- Subject:
- XM_011510909.1
- Aligned Length:
- 5879
- Identities:
- 406
- Gaps:
- 5449
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTACCTTAACCGGTTGTAGACTGGTGGAGAAAACCCAGAAGGTGGAGAATCCATCAGTCTCATTTGCCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCTTTCCCCCTTATTCCTCTTCTCCTAAGAGGCAAGAGTGTTCAGAAGAAACAAGCAGAGAGTAAAAGCCAGA 148
Query 1 --------------------------------------------------ATGCTCACCCAGGCTTCAAGCTCC 24
|||||||||||||||.||||||||
Sbjct 149 TAAAGCTCCATACTCAGAGTGCTCCCTTTGGACTGTGTCCCAAGGACATGATGCTCACCCAGGCTCCAAGCTCC 222
Query 25 GTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGTGGC 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GTCGTGAGGTCCAGGAACAGCAGGAACCACACCGTGAACTCTGGTGGATCCTGCCTGAGTGCCAGCACAGTGGC 296
Query 99 CATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCA 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CATCCCTGCCATCAACGACAGCAGTGCAGCCATGAGTGCCTGCAGCACCATCAGCGCCCAGCCCGCAAGCTCCA 370
Query 173 TGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTGGCT 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TGGACACTCAGATGCACTCCCCAAAGAAGCAGGAGAGAGTGAACAAGAGGGTCATCTGGGGCATTGAGGTGGCT 444
Query 247 GAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATCCTT 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GAGGAGCTGCATTGGAAAGGCTGGGAGCTAGGAAAGGAGACCACAAGGAATCTGGTTCTGAAAAATCGATCCTT 518
Query 321 GAAACTCCAGAAGATGAAGCACAGGTACCAGTATAAGGGATCAAGGACCCAG----------------TGCCAC 378
|||||||||||||||||||.|||||..|| |.|.||||.|| |.||.|
Sbjct 519 GAAACTCCAGAAGATGAAGTACAGGCCCC------------CCAAGACCAAGTTCTTCTTCACGGTCATCCCTC 580
Query 379 AGC-------CTTGAGCCCCGAAAGCAGGCTCTCTTCAAAACAAAACAAAACAAACAAAAAAAACCTTTA---- 441
||| |.|||||| ||||| |.||||.|.|
Sbjct 581 AGCCCATCTTCCTGAGCC-------CAGGC------------------------------ATAACCCTCACGCT 617
Query 442 --ACAT---------GCCATATAAAAGCCAGTGAGTGTTTAAAATACATGCA---------GTATGAA------ 489
.||| ||| |.|..|.||.|..||| ||||||.| ||.|||.
Sbjct 618 CCCCATCGTCTTCCGGCC-TCTGGAGGCGAAGGAG---------TACATGGACCAGCTGTGGTTTGAGAAAGCG 681
Query 490 -------------------------------------------------------------------------- 489
Sbjct 682 GAGGGGATGTTCTGTGTCGGCCTACGGGCCACCCTGCCCTGCCACAGGCTGATCTGCCGCCCACCATCCCTGCA 755
Query 490 -------------------------------------------------------------------------- 489
Sbjct 756 GCTGCCCATGTGTGCTGTGGGAGATACGACTGAGGCCTTTTTCTGCCTGGATAATGTGGGGGACCTGCCCACCT 829
Query 490 -------------------------------------------------------------------------- 489
Sbjct 830 TCTTCACCTGGGAGTTCTCCAGCCCATTCCAGATGCTGCCCGCCACGGGGCTCCTGGAGCCAGGCCAGGCCTCT 903
Query 490 -------------------------------------------------------------------------- 489
Sbjct 904 CAGATCAAGGTGACCTTTCAGCCCCTTACAGCCGTCATCTACGAGGTGCAGGCCACGTGCTGGTACGGGGCGGG 977
Query 490 -------------------------------------------------------------------------- 489
Sbjct 978 CAGCCGGCAGAGGAGCAGCATCCAGCTGCAGGCTGTGGCCAAGTGCGCCCAGCTGCTGGTGAGCATAAAGCACA 1051
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1052 AGTGCCCGGAGGACCAGGATGCCGAGGGCTTCCAGAAGCTGTTGTACTTTGGCTCTGTTGCTGTGGGCTGCACC 1125
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1126 TCGGAGAGGCAGATCAGGCTACACAACCCGTCGGCGGTAAATGCCCCCTTCAGGATTGAAATTTCCCCGGATGA 1199
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1200 ACTGGCCGAAGACCAGGCCTTCTCATGCCCCACGGCCCATGGCATCGTGCTTCCGGGAGAGAAGAAATGTGTGT 1273
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1274 CGGTGTTCTTCCACCCCAAGACTCTGGACACCAGAACTGTGGACTACTGCTCCATCATGCCTTCTGGCTGTGCC 1347
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1348 TCCAAGACCCTGCTTAAAGTCGTTGGTTTCTGTAGAGGCCCTGCTGTGTCCCTGCAGCACTACTGTGTCAACTT 1421
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1422 CAGCTGGGTCAACCTTGGGGAGCGCTCCGAGCAGCCCCTGTGGATTGAGAACCAATCGGACTGCACGGCCCACT 1495
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1496 TCCAGTTTGCCATCGACTGCTTGGAGAGTGTCTTTACCATCAGGCCTGCCTTTGGGACGCTGGTGGGCAAGGCC 1569
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1570 CGTATGACCCTGCACTGTGCCTTCCAGCCCACTCACCCCATCATCTGCTTTCGGCGTGTGGCCTGTCTCATCCA 1643
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1644 CCACCAGGACCCACTGTTCCTGGACCTGATGGGGACCTGCCACTCGGACAGCACCAAGCCAGCCATCCTGAAGC 1717
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1718 CTCAGCACCTCACCTGGTACCGCACACACCTGGCCCGGGGCCTGACGCTCTACCCCCCTGACATCCTGGATGCC 1791
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1792 ATGCTGAAGGAGAAGAAGCTGGCACAGGACCAGAACGGGGCTCTCATGATTCCCATCCAGGATCTGGAGGACAT 1865
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1866 GCCGGCCCCGCAGTACCCTTATATCCCCCCCATGACCGAGTTCTTCTTCGACGGCACCAGCGACATAACCATCT 1939
Query 490 -------------------------------------------------------------------------- 489
Sbjct 1940 TCCCCCCGCCCATCAGTGTAGAGCCTGTCGAGGTAGACTTCGGTGCCTGCCCAGGGCCTGAGGCCCCCAACCCT 2013
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2014 GTACCCCTGTGCCTGATGAACCACACCAAGGGCAAGATCATGGTGGTCTGGACGCGAAGGTCTGACTGCCCCTT 2087
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2088 CTGGGTGACTCCAGAGAGCTGCGACGTGCCCCCACTCAAGTCCATGGCCATGCGCCTGCACTTCCAGCCGCCTC 2161
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2162 ACCCCAACTGCCTTTACACGGTGGAGCTCGAAGCCTTCGCCATCTATAAGGTCCTGCAGAGCTACAGTAATATT 2235
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2236 GAGGAGGACTGCACCATGTGCCCATCCTGGTGCCTGACGGTGCGGGCACGAGGCCACAGCTATTTCGCTGGCTT 2309
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2310 TGAGCACCACATCCCCCAGTATTCCCTAGATGTCCCCAAGCTATTTCCAGCAGTGTCCTCCGGTGAGCCCACCT 2383
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2384 ACCGCAGCCTGCTCCTGGTCAACAAAGACTGCAAGCTGCTGACCTTCAGCCTGGCCCCCCAGAGAGGCTCAGAC 2457
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2458 GTCATCCTTCGGCCCACTTCGGGCCTTGTGGCACCCGGGGCCCACCAGATCATCCTCATCTGCACCTACCCTGA 2531
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2532 GGGCAGCTCCTGGAAGCAGCACACTTTCTATCTGCAGTGCAATGCTTCCCCCCAGTATCTCAAGGAGGTGAGCA 2605
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2606 TGTACAGCCGGGAGGAGCCACTGCAGCTGAAGCTGGACACCCACAAAAGCCTCTACTTCAAGCCCACCTGGGTG 2679
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2680 GGCTGCTCCTCCACCAGCCCCTTCACCTTCCGCAACCCCTCGCGTCTGCCCCTGCAGTTCGAGTGGAGGGTCTC 2753
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2754 TGAGCAGCATCGAAAGCTGCTGGCTGTCCAGCCCTCCAGGGGGCTAATCCAGCCCAACGAGAGACTTACGCTGA 2827
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2828 CGTGGACCTTCAGCCCTTTGGAGGAGACCAAGTACCTGTTCCAAGTGGGGATGTGGGTCTGGGAAGCCGGCCTG 2901
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2902 TCCCCAAATGCCAACCCCGCTGCCACCACCCACTACATGCTCCGGCTGGTGGGCGTTGGGCTCACCAGCAGCCT 2975
Query 490 -------------------------------------------------------------------------- 489
Sbjct 2976 CTCTGCAAAGGAAAAGGAGCTGGCCTTTGGGAATGTGCTGGTGAACAGCAAGCAGTCCAGGTTCCTTGTCCTCC 3049
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3050 TGAATGACGGCAACTGCACCCTCTATTACCGCCTCTACCTGGAGCAGGGCAGCCCTGAGGCCGTTGACAACCAC 3123
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3124 CCCCTCGCTCTGCAGCTGGACCGAACAGAGGGGAGCATGCCACCCCGGTCCCAGGACACCATCTGCCTGACTGC 3197
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3198 CTGTCCCAAGCAGCGGTCCCAGTACTCCTGGACCATCACCTACTCTCTCCTTTCCCACAGAGATAACAAGGCTG 3271
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3272 GGGAGAAGCAGGAGCTGTGCTGCGTCTCCCTGGTGGCCGTGTACCCCTTGCTTTCCATCCTGGATGTCAGCTCC 3345
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3346 ATGGGCAGTGCTGAGGGTATCACCCGGAAGCACCTGTGGCGCCTCTTCTCTCTGGACCTGCTTAACAGTTACTT 3419
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3420 GGAGCGTGACCCCACCCCCTGTGAGCTCACCTACAAGGTGCCCACCCGGCACAGCATGAGCCAGATCCCCCCCG 3493
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3494 TCCTCACCCCTTTAAGGCTTGACTTCAATTTCGGGGCCGCACCATTCAAGGCCCCACCTTCCGTGGTATTCCTG 3567
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3568 GCCCTGAAGAACAGCGGAGTGGTGTCCCTGGACTGGGCCTTCCTCCTTCCAAGTGACCAGCGGATTGACGTGGA 3641
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3642 GCTCTGGGCAGAGCAAGCAGAGTTGAATTCCACTGAGCTCCACCAGATGCGCGTGCAGGACAATTGCCTCTTCT 3715
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3716 CCATCAGCCCCAAGGCTGGGAGCCTGAGTCCTGGGCAGGAGCAGATGGTGGAGTTAAAATACAGCCACCTGTTC 3789
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3790 ATCGGTACTGATCACCTCCCAGTGCTCTTCAAGGTGTCCCATGGCCGGGAGATCCTGCTAAATTTCATAGGTGT 3863
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3864 GACAGTGAAGCCGGAGCAGAAGTATGTGCACTTCACCTCTACTACCCACCAGTTCATCCCCATTCCCATTGGTG 3937
Query 490 -------------------------------------------------------------------------- 489
Sbjct 3938 ACACGCTACCCCCACGGCAGATTTATGAGCTGTATAATGGTGGCTCAGTGCCCGTGACATATGAGGTCCAGACC 4011
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4012 GATGTCCTGTCACAGGTTCAGGAAAAAAATTTTGATCACCCCATCTTTTGCTGCCTCAACCCCAAAGGGGAGAT 4085
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4086 CCAGCCAGGCAGCACTGCCCGGGTCTTGTGGATCTTCTCACCTATCGAGGCCAAGACCTACACGGTGGACGTGC 4159
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4160 CCATACACATCCTGGGATGGAACTCGGCCCTCATCCACTTCCAGGGAGTGGGCTACAACCCCCATATGATGGGG 4233
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4234 GACACAGCCCCATTCCACAACATCTCCTCGTGGGACAACAGTTCCATACACTCTAGGCTGGTGGTGCCTGGACA 4307
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4308 GAATGTCTTCCTGTCCCAGTCTCATATTTCCCTGGGAAACATACCTGTGCAGAGCAAGTGCAGCCGCCTGCTCT 4381
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4382 TCCTCAACAACATCTCCAAGAACGAGGAAATTGCCTTCTCCTGGCAGCCAAGTCCTCTAGATTTTGGGGAGGTG 4455
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4456 TCTGTGAGTCCCATGATAGGGGTGGTGGCTCCTGAAGAGACGGTCCCATTTGTGGTGACCTTGAGGGCCTCTGT 4529
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4530 GCATGCCAGCTTCTACAGTGCAGACCTGGTATGCAAGCTGTACTCGCAGCAGCTCATGAGGCAGTATCACAAGG 4603
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4604 AGCTGCAGGAGTGGAAGGACGAGAAGGTGCGGCAGGAAGTGGAGTTCACCATCACCGACATGAAAGTGAAGAAG 4677
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4678 AGAACATGCTGCACAGCCTGTGAACCTGCGAGGAAGTACAAGACACTGCCTCCCATCAAGAACCAGCAGTCTGT 4751
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4752 CAGCCGGCCTGCCAGCTGGAAACTGCAGACCCCAAAGGAGGAGGTGTCCTGGCCCTGCCCCCAGCCACCCTCGC 4825
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4826 CAGGCATGCTCTGCCTGGGCCTTACTGCCCGAGCCCATGCCACCGACTACTTTCTGGCTAACTTCTTCTCAGAG 4899
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4900 TTTCCCTGCCACTTTTTGCACCGCATGGTGGCTTGCCCAGGCCACTCAGAATGTCATGGCTGCCACAGGGAGCT 4973
Query 490 -------------------------------------------------------------------------- 489
Sbjct 4974 GCCAAAGAGGAAGGCCCCCAGGGAAGAGTCAGAGACTTCTGAGGAAAAATCCCCTAACAAGTGGGGCCCTGTTT 5047
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5048 CCAAGCAGAAGAAGCAGCTCCTGGTTGACATTCTCACCACAATAATCAGGGGCCTGCTGGAAGACAAGAACTTC 5121
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5122 CATGAGGCTGTGGACCAAAGCCTGGTGGAGCAGGTGCCGTACTTCCGCCAATTCTGGAATGAGCAGTCAACTAA 5195
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5196 GTTCATGGACCAGAAAAACAGCCTGTACTTAATGCCAATCCTGCCTGTACCCTCCAGCAGCTGGGAGGATGGGA 5269
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5270 AGGGCAAGCAGCCGAAGGAAGACAGACCAGAGCACTATCCAGGGTTGGGAAAGAAGGAAGAGGGGGAGGAGGAG 5343
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5344 AAGGGTGAAGAGGAAGAAGAAGAGTTGGAGGAGGAAGAGGAGGAAGAAGAGGAGACAGAAGAGGAGGAGTTGGG 5417
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5418 CAAGGAGGAGATAGAGGAGAAGGAGGAGGAGAGGGATGAGAAGGAAGAGAAAGTGAGCTGGGCGGGCATCGGGC 5491
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5492 CCACACCACAGCCTGAGTCCCAGGAGTCCATGCAATGGCAGTGGCAACAGCAGCTGAATGTCATGGTGAAGGAG 5565
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5566 GAGCAAGAACAGGACGAGAAGGAGGCCATCAGAAGGCTCCCGGCCTTCGCCAACCTGCAGGAGGCGCTGCTGGA 5639
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5640 GAACATGATCCAGAACATCCTGGTGGAGGCGAGCCGCGGGGAGGTGGTACTCACCTCGCGGCCACGCGTCATCG 5713
Query 490 -------------------------------------------------------------------------- 489
Sbjct 5714 CCCTGCCGCCGTTCTGCGTGCCCAGGAGTCTGACCCCGGACACGCTGCTGCCGACGCAGCAAGCAGAGGTACTC 5787
Query 490 --------------------------------- 489
Sbjct 5788 CACCCGGTGGTGCCACTTCCTACCGACCTTCCG 5820
