Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14460
- Subject:
- NM_001367828.2
- Aligned Length:
- 3087
- Identities:
- 769
- Gaps:
- 2316
Alignment
Query 1 ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGCTCCAGGATCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC 1480
||||
Sbjct 1 ----------------------------------------------------------------------ATGC 4
Query 1481 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 78
Query 1555 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 79 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 152
Query 1629 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 226
Query 1703 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 227 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 300
Query 1777 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 374
Query 1851 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 375 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 448
Query 1925 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 449 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 522
Query 1999 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 523 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 596
Query 2073 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 670
Query 2147 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 744
Query 2221 GCCGTGGCCCTTGGGAGAGAGGTGGGTGNCCGC----------------------------------------- 2253
||||||||||||||||||||| |.||.|
Sbjct 745 GCCGTGGCCCTTGGGAGAGAG------GGCCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCT 812
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 813 TTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAAGG 886
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 887 AGGCAGCCAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACAGGCTCCGTGCA 960
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 961 GAGCTGGGCCGACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGGAAGCCAGGCGA 1034
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1035 GGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCA 1108
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1109 AGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGA 1182
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1183 CTTGACGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGA 1256
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1257 AGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCT 1330
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1331 CCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGTCACCTCC 1404
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1405 CAGGGTGACTCAACTCCAGAGCTCCCAGCTCCTCCAGCAGCCGACAGGAGGCCCGTCAAGATGCAGGCAGGCAT 1478
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1479 TGCCACCCCAGGGATGAAGACAGCAGCCCAGGCAAAGGCCAAGACCACAGGAGCCTCCCGGTCTCATCCTGCAA 1552
Query 2254 ----------------------------------------------------- 2253
Sbjct 1553 AAGCTAAAGGCTGCCAGAGGCCCCCCAAGATCCGTAACTACAACATTATGGAC 1605
