Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14460
- Subject:
- XM_017024471.2
- Aligned Length:
- 3324
- Identities:
- 1738
- Gaps:
- 1575
Alignment
Query 1 ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA 518
.|.||||||...|..|||||
Sbjct 1 ------------------------------------------------------ATGGCTCTGTCTATGCAGGA 20
Query 519 ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 21 ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA 94
Query 593 ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA 168
Query 667 AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG 242
Query 741 GGAGCTCCAGGATCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC 814
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 GGAGCTCCAGGACCTGGAGGCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGC 316
Query 815 TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 317 TAACCAGGAAGAAGGAAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGTCTGGCCAGGGAGAAGGAT 390
Query 889 GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 391 GCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCA 464
Query 963 GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 465 GGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGG 538
Query 1037 ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 ACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTA 612
Query 1111 TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 613 TCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGT 686
Query 1185 GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 687 GGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGG 760
Query 1259 AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 761 AGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAG 834
Query 1333 TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 835 TCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGC 908
Query 1407 GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC 1480
|||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 GCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGC 982
Query 1481 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 983 ATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCC 1056
Query 1555 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1057 AGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGA 1130
Query 1629 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1131 GGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAG 1204
Query 1703 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1205 AGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAG 1278
Query 1777 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1279 TTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCA 1352
Query 1851 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 1924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1353 GCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAG 1426
Query 1925 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 1998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1427 CTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGA 1500
Query 1999 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 GTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCT 1574
Query 2073 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 2146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1575 CCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGC 1648
Query 2147 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 2220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1649 TGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGAC 1722
Query 2221 GCCGTGGCCCTTGGGAGAGAGGTGGGTGNCCGC----------------------------------------- 2253
||||||||||||||||||||| |.||.|
Sbjct 1723 GCCGTGGCCCTTGGGAGAGAG------GGCCTCACCAAGAGAGGGCCTATGGAGGCCGAGGACCAGGGGGAGCT 1790
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1791 TTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGCACCGACTCCAGAGAAAGCTGAAGG 1864
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1865 AGGCAGCCAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATCGAGATGGGGAACAGGCTCCGTGCA 1938
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1939 GAGCTGGGCCGACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGCCCCTGAGGCCCGGAAGCCAGGCGA 2012
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2013 GGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGCCCCATTTTACATCTCAGGACGCCA 2086
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2087 AGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCCCGCTCAGCACAGGTGGGCAGCAGA 2160
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2161 CTTGACGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGACCTGTAAATCACCTCGGCAGAAAGA 2234
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2235 AGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATGGTCGCCAATCCCACAGCTCCTCCT 2308
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2309 CCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGATCCAGCCCTTCTGGTGTCACCTCC 2382
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2383 CAGGGTGACTCAACTCCAGAAATGGGGTCTCACTATGTCACCCAGGCTGGTCTCGAACTCCTGGGCTCAAGCAG 2456
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2457 TCCTGCCGCCTTGGCCTCCCAAAGTGCTGAGATGACAGGTGTGGGCCCCACGCCCAGCCTGGCGTGGAGTGGAG 2530
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2531 CCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGGGCTCCAGGAATGCGAGGGGGAATG 2604
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2605 AATGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTGGTCACCATCACAGCAGCCTTGCAG 2678
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2679 TGGGATCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGCTCTCTTGTTTCTCACTACCTGCTCCTGTCG 2752
Query 2254 -------------------------------------------------------------------- 2253
Sbjct 2753 TTCTAGTCCCATTGCTGCTCTCAGGACAAGCTGTGACTGAGAGAGCAGGTCACGCTGGTGACATTTTA 2820
