Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14460
- Subject:
- XM_017024475.2
- Aligned Length:
- 3348
- Identities:
- 1445
- Gaps:
- 1884
Alignment
Query 1 ATGCTGCCACTGGGCTCAGAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGCACACCGCACCCAGCTGCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAAC 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TGCGGTGCCTGCAGGAGGACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTAT 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GACGCCGCCTTCGCCCAGGCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGC 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGCTAAGCTGAGGCAGGCGCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCAT 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TCCAGGAGCATCGCCTGGAGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TATGAAAATCTAAAATGGACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 ACTGCTGCTGGAGTTTGAATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 ACACAGCCTTGTCCCGGGAGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 AAGGCTGCAGAGAGTCTGCAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGG 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 GGAGCTCCAGGATCTGGAG---GCCATGAGCCGCGCCCGGGTAAAGGATTTAGAGGATAAACT-------TCA- 803
.||||| |||||| |..|||.||.| ||..| .||||| |||
Sbjct 1 -------------ATGGAGTTTGCCATG---CTGGCCAGGCT---GGTCT-------CAAACTCTTGTCCTCAA 48
Query 804 ---CTCTGTGCA-----GCTAACCAGGAAGAAGGAAGAG----GAAACATTTA-AGAGGAAGCATGAGGAGCTC 864
.||.|.||| ||...||| |||.| || ||| ||.| |||||||||||||
Sbjct 49 GTGGTCCGCGCACCTCGGCCTCCCA---------AAGTGCTGCGA-----TTACAGGG---GCATGAGGAGCTC 105
Query 865 GACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCT 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 106 GACCGTCTGGCCAGGGAGAAGGATGCAGTGCTGGTGGCGGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCT 179
Query 939 GCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGAC 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 GCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGACCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGAC 253
Query 1013 AGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCC 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 254 AGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGACCAACTTCGTGAAGATGCATCAACTGTAAAATCTGCC 327
Query 1087 TGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGA 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 328 TGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGTCTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGA 401
Query 1161 AGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGG 1234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 402 AGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGCAGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGG 475
Query 1235 CAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGAC 1308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 CAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTGCAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGAC 549
Query 1309 ATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGC 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 ATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGATTCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGC 623
Query 1383 CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACC 1456
|||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
Sbjct 624 CAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGGAGGTGGTGCTGAAGGCCGTGACCCTGGAACGAGACC 697
Query 1457 AGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAA 1530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 698 AGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGACCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAA 771
Query 1531 GAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGAT 1604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 772 GAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCGGCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGAT 845
Query 1605 TGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCA 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 TGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATCAGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCA 919
Query 1679 CAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCA 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 920 CAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGATGCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCA 993
Query 1753 GAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGAT 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 GAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGAAAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGAT 1067
Query 1827 GTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTG 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1068 GTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCACCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTG 1141
Query 1901 GTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG 1974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1142 GTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGAGGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTG 1215
Query 1975 GCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCG 2048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1216 GCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAACCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCG 1289
Query 2049 GGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGG 2122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 GGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTCCCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGG 1363
Query 2123 AGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGC 2196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1364 AGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTCAGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGC 1437
Query 2197 AGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGAGGTGGGTGNCCGC----------------- 2253
||||||||||||||||||||||||||||||||||||||||||||| |.||.|
Sbjct 1438 AGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGGGAGAGAG------GGCCTCACCAAGAGAGGGCCTAT 1505
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1506 GGAGGCCGAGGACCAGGGGGAGCTTTTCCTGCACCTCCGGTCAGTGGCACGTGCCCCCCAGACCTTATCTATGC 1579
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1580 ACCGACTCCAGAGAAAGCTGAAGGAGGCAGCCAGAAAAATCATCAGCCTCCGCCTGGAGAAAGAGCAGCTCATC 1653
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1654 GAGATGGGGAACAGGCTCCGTGCAGAGCTGGGCCGACCCGAAAGGTGGCTGTTGCACCACGCCCTCCCTCCTGC 1727
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1728 CCCTGAGGCCCGGAAGCCAGGCGAGGAGCCCAGGAGGCCTTTGGATCGCAGCCCACCTTTGGGACAGGTGCAGC 1801
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1802 CCCATTTTACATCTCAGGACGCCAAGAGTGCCGAGGATGAGGCTCCTTCCAGACACTTGGGAAAGCACCAGCCC 1875
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1876 CGCTCAGCACAGGTGGGCAGCAGACTTGACGCCCTGCAAGGCCCGAAGACACAACACAGCATCCACACGGTGAC 1949
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 1950 CTGTAAATCACCTCGGCAGAAAGAAGACAGGTCCCCAAAGCCACCCCAGGCTCCCCAGCACCCTGAGGAGCATG 2023
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2024 GTCGCCAATCCCACAGCTCCTCCTCCTTTGCCAGTGGCACCCTCCAGGACATGTGGAGGTTGCTAGACCTGGGA 2097
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2098 TCCAGCCCTTCTGGTGTCACCTCCCAGGGTGACTCAACTCCAGAAATGGGGTCTCACTATGTCACCCAGGCTGG 2171
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2172 TCTCGAACTCCTGGGCTCAAGCAGTCCTGCCGCCTTGGCCTCCCAAAGTGCTGAGATGACAGGTGTGGGCCCCA 2245
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2246 CGCCCAGCCTGGCGTGGAGTGGAGCCCTTCACCCAAACATGAACCAGGAGGCGAGCTTGGTAAGGAGCACGTGG 2319
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2320 GCTCCAGGAATGCGAGGGGGAATGAATGGAGGCAGCTCCTCAGTGTGCAAAAACATGCAGCGCGGGCCTCACTG 2393
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2394 GTCACCATCACAGCAGCCTTGCAGTGGGATCAGGACAGTCCTGCTGTCCAGGAAGGAGAGGACCCTGCTCTCTT 2467
Query 2254 -------------------------------------------------------------------------- 2253
Sbjct 2468 GTTTCTCACTACCTGCTCCTGTCGTTCTAGTCCCATTGCTGCTCTCAGGACAAGCTGTGACTGAGAGAGCAGGT 2541
Query 2254 ------------------ 2253
Sbjct 2542 CACGCTGGTGACATTTTA 2559
