Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14460
- Subject:
- XR_001752495.1
- Aligned Length:
- 2683
- Identities:
- 868
- Gaps:
- 1808
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTAGAAATGGCTGTGGCTACTCTTCGGCAGTCAGTGGAGGAAGTGAAAAAAAACACGGGGTCACAGGTATTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTGGAAAACTCAAACTGTTTTTCCTCTACTCTGATACCACAAGAATCATCAGCACAGAGGAAGACTTCTGTGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAAATGTGGTGGGAGAGGGAGGTTTTCACCAGCACATGAGCAGTCAGTTCTGCCGCAGACTCGGCGGGTGTCCT 222
Query 1 --------------------------------------------------------ATGCTGCCACTGGGCTCA 18
||||||||||||||||||
Sbjct 223 TCGGTTCAGTTCCAACACCGCCTGCCTGGAGAGAGGTCAGACCACAGGCGGCCACCATGCTGCCACTGGGCTCA 296
Query 19 GAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCT 92
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 GAGCCCGCCCTGAATGAGCTGCTGCTTCGCAAGGAGGAGGAGTGGAGGGCGCTGCAGGCACACCGCACCCAGCT 370
Query 93 GCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGG 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 GCAGGAGGCGGCTCTGCAGGACACACGGAGCCAGCTGGAGGAGGCGCAGGGGAAACTGCGGTGCCTGCAGGAGG 444
Query 167 ACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAG 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ACTTTGTCTACAACCTTCAGGTGCTGGAGGAGCGGGACCTCGAGCTGGAGCGCTATGACGCCGCCTTCGCCCAG 518
Query 241 GCCAGGGAGTGGGAGGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGC 314
||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GCCAGGGAGTGGGAAGAGGCCAGGCGGGCAGAGGTGAGCGAGCTCAAGATAGAGGCAGCTAAGCTGAGGCAGGC 592
Query 315 GCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGG 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GCTAGCCAGAGAGGCCAGGAAGGTGGAGGAGCTGCAGCAGCAGCAGCAGCTGGCATTCCAGGAGCATCGCCTGG 666
Query 389 AGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGG 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGCTGGAGCGCGTCCACAGTGACAAGAATGGTGAGATTGACCACCACCGGGAACAGTATGAAAATCTAAAATGG 740
Query 463 ACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGA 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACACTGGAGAGAAAACTTGAGGAGCTCGACGGTGAGCTTGCTCTGCAGAGACAGGAACTGCTGCTGGAGTTTGA 814
Query 537 ATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGG 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCGAAAATGCGGAAGAGGGAGCACGAATTCCGTCTGCAGGCTGACAACATGAGCAACACAGCCTTGTCCCGGG 888
Query 611 AGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTG 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGCTTAAGGTTAAACTACTGCACAAAGAGCTGGAGGCTCTGAAGGAAGCCGGGGCAAAGGCTGCAGAGAGTCTG 962
Query 685 CAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGATCTGGA 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 963 CAGAGGGCAGAGGCCACCAACGCCGAGCTGGAGAGGAAGCTCCAGAGCCGAGCCGGGGAGCTCCAGGACCTGGA 1036
Query 759 GGCCATGAGCCGCGCCC--------------------------------------------------------- 775
|||||||||||||||||
Sbjct 1037 GGCCATGAGCCGCGCCCGGTGCGCGAGTCCTTCATCTCCCGAGGCGTGCTCTGTGGCAGCCTCGCAGGCCAGGA 1110
Query 776 -------------------------------------------------------------------------- 775
Sbjct 1111 CTGGAGTCTGGGGGATTCTACCTTTTCTGCTCATTCCAGGCTGGTCTTTGCTTTCATCTCACTTGCTCCTTCCA 1184
Query 776 --------------------GGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGG 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TAAATATTTGTTTCTTTTCAGGGTAAAGGATTTAGAGGATAAACTTCACTCTGTGCAGCTAACCAGGAAGAAGG 1258
Query 830 AAGAGGAAACATTTAAGAGGAAGCATGAGGAGCTCGACCGT-CTGGCCAGGGAGAAGGATGCAGTGCTGGTGGC 902
||||||||||||||||||||||..|| ||||.|.| ||.| ||||||||
Sbjct 1259 AAGAGGAAACATTTAAGAGGAAAGAT--GGAGTTTG-CCATGCTGGCCAG------------------------ 1305
Query 903 GGTGAAGGGAGCCCACGTGGAGCAGCTGCAGGAGCTGCAGACCAGGGTTCTGGAGCTGCAGGCCCACTGCGAGA 976
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 977 CCCTCGAGGCGCAGCTCCGCAGGGCAGAGTGGAGACAGGCTGACACCGCCAAGGAGAAGGACGCTGCCATTGAC 1050
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1051 CAACTTCGTGAAGATGCATCAACTGTAAAATCTGCCTGGGATGCTCAAATTGCTCAACTATCTAAGGAGATGGT 1124
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1125 CTCCAGAGACCTTCAGATTCAGACGCTGCAGGAAGAAGAGGTGAAGCTCAAGGCACAGGTGGCCCGATCCCAGC 1198
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1199 AGGACATTGAAAGGTACAAGCAACAGCTGTCCCTGGCAGTGGAAAGGGAGCGGAGCCTGGAGCGTGATCAGGTG 1272
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1273 CAGCTGGGCCTGGACTGGCAGCGCCGCTGTGATGACATTGAAAGGGACCAGATCCAAAAGTCAGAGGCCCTGAT 1346
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1347 TCAGGGTCTGAGCATGGCAAAAAGTCAGGTTGCTGCCAAGCTGCAGGAGACAGAGCAGGCGCTACAGGAGCAGG 1420
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1421 AGGTGGTGCTGAAGGCCATGACCCTGGAACGAGACCAGGCCGTGCAGGCCCTGAGGATGCATGGGCTCCCCAGA 1494
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1495 CCAGGGGCACAGATGCTTCTCAGGCAGCATGAAGAAGAAATAAGTAAAGACTTTCCATCCAGTGAGATCCAGCG 1568
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1569 GCTCCGAGAGCAGAACACGAGCTTGCGAAACGCGATTGCCCAGATGAGGAAAGAAATGGAGGCTCTAAGCCATC 1642
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1643 AGATTCCTCCTCCCATCCAGACAGCGGCAGAGAGCACAGATGCAAACCAGCCTGACCCAGAGGCTGGGGGAGAT 1716
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1717 GCCGCCACTCCTGATTATGTTCTGGCCCTTGAAGCAGAAATACGAACTCTAAAGCATAAGTTTAAAACTCTGGA 1790
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1791 AAAGCATCTAGAAGATGTGTTGGATCCTTTAAAGATGTCCTCACCTCATGCTGAGTCTCAGCCCAGCGTCCGCA 1864
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1865 CCTCGACAGAGACGACTGGAGGGTCTGCCCAAGCTGGTCAAGCCGGAGGGTCTGTCCAAGCTGGTCAAGCAGGA 1938
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 1939 GGATCTGTCCAAGCTGGCCCAGTATCCTCTGGACTGGCACTCAGGAAGCTCGGGGACAGAGTGCAGCTCCTAAA 2012
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 2013 CCTGCTGGTGACACGACTCAGACAGAAGGTGCTGCGGGAACCCCTGGAGCCGGCCGCTCTCCAGCGTGAGCTTC 2086
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 2087 CCCGTGAGGTGGACCAGGTACACCTGGAGGTTTTGGAGCTGCGGAAGCAGGTGGCTGAGCTGGGGAAGCATCTC 2160
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 2161 AGGATAGCCCAGCACGGGGGAGCGGAGCCTTCAGGCAGGAAGCAGCCCCCAGCCTCGGACGCCGTGGCCCTTGG 2234
Sbjct 1306 -------------------------------------------------------------------------- 1305
Query 2235 GAGAGAGGTGGGTGNCCGC 2253
Sbjct 1306 ------------------- 1305
