Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14510
- Subject:
- NM_001288737.2
- Aligned Length:
- 2566
- Identities:
- 255
- Gaps:
- 2273
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGGCAACCGCGGCATGGAAGATCTCATCCCGCTGGTCAACCGGCTGCAAGACGCCTTCTCTGCCATCGGCCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAACGCGGACCTCGACCTGCCGCAGATCGCTGTGGTGGGCGGCCAGAGCGCCGGCAAGAGCTCGGTGCTCGAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATTTCGTAGGCAGGGACTTCTTGCCTCGAGGATCTGGCATTGTCACCCGACGTCCCCTGGTCTTGCAGCTGGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGCAACCACAGAATATGCCGAGTTCCTGCACTGCAAGGGAAAGAAATTCACCGACTTCGAGGAGGTGCGCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGAGATCGAGGCCGAGACCGACAGGGTCACCGGCACCAACAAGGGCATCTCGCCGGTGCCTATCAACCTCCGCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCTACTCGCCGCACGTGCTGAACCTGACCCTGGTGGACCTGCCCGGAATGACCAAGGTCCCGGTGGGGGACCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCTCCCGACATCGAGTTCCAGATCCGAGACATGCTTATGCAGTTTGTCACCAAGGAGAACTGCCTCATCCTGGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGTCCCCCGCCAACTCTGACCTGGCCAATTCTGACGCCCTCAAGGTCGCCAAGGAGGTGGACCCCCAGGGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGCGCACCATCGGGGTCATCACCAAGCTGGACCTGATGGACGAGGGCACAGATGCCCGTGATGTGCTGGAGAAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGCTGCTCCCCCTGCGCAGAGGCTACATTGGAGTGGTGAACCGGAGCCAGAAGGACATTGATGGCAAGAAGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CATTACCGCCGCCTTGGCTGCTGAACGAAAGTTCTTCCTCTCCCATCCATCTTATCGCCACTTGGCTGACCGTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGGCACGCCCTACCTGCAGAAGGTCCTCAATCAGCAACTGACGAACCACATCCGGGACACACTGCCGGGGCTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGGAACAAGCTGCAGAGCCAGCTACTGTCCATTGAGAAGGAGGTGGAGGAATACAAGAACTTCCGCCCTGATGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCAGCTCGCAAGACCAAGGCCCTGCTGCAGATGGTCCAGCAGTTCGCCGTAGACTTTGAGAAGCGCATTGAGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCTCAGGAGATCAGATCGACACCTACGAACTGTCAGGGGGAGCCCGCATTAACCGAATCTTCCACGAGCGCTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTTTCGAGCTGGTCAAGATGGAGTTTGATGAGAAGGAACTCCGAAGGGAGATCAGCTATGCTATCAAGAATAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCATGGCATTAGGACGGGCCTCTTCACACCTGACCTCGCTTTTGAAGCCACAGTGAAAAAGCAGGTGCAGAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCAAAGAGCCCAGTATCAAGTGTGTGGATATGGTAGTCAGTGAGCTCACAGCCACCATCAGAAAGTGTAGCGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAGCTCCAGCAGTACCCGCGGCTACGGGAGGAGATGGAGCGCATCGTGACCACCCACATCCGGGAGCGCGAGGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCGCACTAAGGAGCAGGTCATGCTTCTCATCGATATCGAGCTGGCTTACATGAACACCAACCATGAGGACTTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TAGGCTTTGCCAATGCTCAGCAGAGGAGCAACCAGATGAACAAGAAGAAGACTTCAGGGAACCAGGATGAGATT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGGTCATCCGCAAGGGCTGGCTGACTATCAATAATATTGGCATCATGAAAGGGGGCTCCAAGGAGTACTGGTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTGCTGACTGCTGAGAATCTGTCCTGGTACAAGGATGATGAGGAGAAAGAGAAGAAATACATGCTGTCTGTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 ACAACCTCAAGCTGCGGGACGTGGAGAAGGGCTTTATGTCGAGCAAGCATATCTTTGCCCTCTTTAACACGGAG 1776
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 1777 CAGAGGAATGTCTACAAGGATTATCGGCAGCTGGAGCTAGCCTGTGAGACACAGGAGGAGGTGGACAGCTGGAA 1850
Query 2 TGCCTTCGTGCT-----CT--------CC-------------------ACAGCAGGCCAGCAAGGCCGAGGAGA 43
.||||.|.|.|| || || |.||.|.||||||.||.|||||||||
Sbjct 1851 GGCCTCCTTCCTGAGGGCTGGCGTGTACCCTGAGCGTGTTGGGGACAAAGAGAAAGCCAGCGAGACCGAGGAGA 1924
Query 44 ATGGTTCCAACAGCTTCATGCACTCCATGGTCCCACAGCTGGAGTGGCAGATGGAGACCACCCAGAGCCTGGTG 117
||||.|||.|||||||||||||.|||||||.||||||||||||..||||..|||||||||.||.||..||.|||
Sbjct 1925 ATGGCTCCGACAGCTTCATGCATTCCATGGACCCACAGCTGGAACGGCAAGTGGAGACCATCCGGAATCTTGTG 1998
Query 118 GACTCCTATGTGGCCATTGTCAACAAGACCGTGTGGGACCTCATGGTTGGTCTCACACCCAAGACCATCATGCA 191
|||||.||..|||||||||||||||||||||||.||||||||||| |||||||||||||||||
Sbjct 1999 GACTCATACATGGCCATTGTCAACAAGACCGTGAGGGACCTCATG------------CCCAAGACCATCATGCA 2060
Query 192 CCTCATGATCAACAACAACAAGGAGTTTATCTTCTCGGAGCTGCTGGCCAACCTGTACTTGCATGGGGACAAGA 265
|||||||||.|||||.|.|||||||||.|||||||||||||||||||||||||||||||.|..|||||||.|||
Sbjct 2061 CCTCATGATTAACAATACCAAGGAGTTCATCTTCTCGGAGCTGCTGGCCAACCTGTACTCGTGTGGGGACCAGA 2134
Query 266 ACATGCTGATGGAGGAGTCGGCAGAGCAGGCACAGTGGTCA--------------------------------- 306
|||.||||||||||||||||||.||||||||||||.|| |.
Sbjct 2135 ACACGCTGATGGAGGAGTCGGCGGAGCAGGCACAGCGG-CGCGACGAGATGCTGCGCATGTACCACGCACTGAA 2207
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2208 GGAGGCGCTCAGCATCATCGGCGACATCAACACGACCACCGTCAGCACGCCCATGCCCCCGCCCGTGGACGACT 2281
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2282 CCTGGCTGCAGGTGCAGAGCGTACCGGCCGGACGCAGGTCGCCCACGTCCAGCCCCACGCCGCAGCGCCGAGCC 2355
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2356 CCCGCCGTGCCCCCAGCCCGGCCCGGGTCGCGGGGCCCTGCTCCTGGGCCTCCGCCTGCTGGGTCCGCCCTGGG 2429
Query 307 -------------------------------------------------------------------------- 306
Sbjct 2430 GGGGGCGCCCCCCGTGCCCTCCAGGCCGGGGGCTTCCCCTGACCCTTTCGGCCCTCCCCCTCAGGTGCCCTCGC 2503
Query 307 -------------------------------------------------- 306
Sbjct 2504 GCCCCAACCGCGCCCCGCCCGGGGTCCCCAGAATCACTATCAGTGACCCC 2553
