Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- NM_009792.3
- Aligned Length:
- 1475
- Identities:
- 517
- Gaps:
- 915
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCCGAAGCCATTAAGCACCCCTGGATC 814
|| ||||| ||
Sbjct 1 --------------------------------------AT----GCTGC-----------------------TC 9
Query 815 --TCGCACCGCTCCACCGTGGCATCGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGCC 886
||.|| |||| ||| |.||.||| ||||| ||||
Sbjct 10 TTTCTCA-CGCT-----GTG-----------------------GGCCCTGG--TGCCT------------TGCC 40
Query 887 AGGAGGAAACTGAAGGGAGCCATT-CTCACC----ACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAGT 955
.||.| || ||.||| || .|.||..||.||| |.|||||||||||.
Sbjct 41 TGGTG-----------------TTGCTAACCCTCTAC-TTTCTCTCCTCCA---------CAGGAGGGAAGAGC 87
Query 956 GGGGGAAACAAGAAGAGCGATGGTGTGAA---------------------------------GGAATCCTCAGA 996
||.|||||||||||||.|||||||||||| ||||||.||.||
Sbjct 88 GGAGGAAACAAGAAGAACGATGGTGTGAAGAAAAGAAAGTCCAGTTCCAGCGTTCAGTTAATGGAATCTTCTGA 161
Query 997 GAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGC 1070
||||||||||||||||||.|||||.|||||||||||||||||.||||||||||||||.||||||||||||||||
Sbjct 162 GAGCACCAACACCACCATTGAGGACGAAGACACCAAAGTGCGCAAACAGGAAATTATCAAAGTGACAGAGCAGC 235
Query 1071 TGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAA 1144
||||.||||||||||||||||||||.||||||||||||||||||||||||||||||||.|||||||||||.|||
Sbjct 236 TGATCGAAGCCATAAGCAATGGAGACTTTGAGTCCTACACGAAGATGTGCGACCCTGGAATGACAGCCTTTGAA 309
Query 1145 CCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAA 1218
||.||||||||||||||||||||.||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct 310 CCAGAGGCCCTGGGGAACCTGGTGGAGGGCCTGGACTTTCATCGATTCTATTTTGAAAACCTGTGGTCCCGGAA 383
Query 1219 CAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCT 1292
||||||||||||||||||||||||||||||.||.|||||||||||||||||.||||||||||||||||||||||
Sbjct 384 CAGCAAGCCCGTGCACACCACCATCCTGAACCCTCACATCCACCTGATGGGTGACGAGTCAGCCTGCATCGCCT 457
Query 1293 ACATCCGCATCACGCAGTACCTGGACGCTGGCGGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGG 1366
|.|||||||||||.|||||||||||.||.||||||||.||.|||||.||||||||.|||||||||||.||||||
Sbjct 458 ATATCCGCATCACTCAGTACCTGGATGCAGGCGGCATACCCCGCACGGCCCAGTCAGAGGAGACCCGCGTCTGG 531
Query 1367 CACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCAC 1435
||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.
Sbjct 532 CACCGCAGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCGCAT 600
