Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_005263254.4
• Aligned Length: 1615
• Identities: 1089
• Gaps: 199

Alignment

Query    1  ATGG---CCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTT  71
            ||||   |.||||..|||||||||.|.||||||||.|||||.|||||.||||||||..|.||.|||||.||.||
Sbjct    1  ATGGCTTCGACCACAACCTGCACCAGGTTCACGGACGAGTATCAGCTTTTCGAGGAGCTTGGAAAGGGGGCATT  74

Query   72  CTCGGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGC  145
            |||.||||||.||||.|||.||||..|.|...||||.||.||.|||||||||||.||.||||||||.||.||||
Sbjct   75  CTCAGTGGTGAGAAGATGTATGAAAATTCCTACTGGACAAGAATATGCTGCCAAAATTATCAACACCAAAAAGC  148

Query  146  TGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTC  219
            |.||.||.||.||.||||||||.||.||..|.|||||..|.||||||||.||..||||||||||.||.||.||.
Sbjct  149  TTTCTGCTAGGGATCATCAGAAACTAGAAAGAGAAGCTAGAATCTGCCGTCTTTTGAAGCACCCTAATATTGTG  222

Query  220  CGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTT  293
            |||||.|||||.|||||.|||||.|||||....||||||.||.|.||.||..|.||.|||||.||.||||||||
Sbjct  223  CGACTTCATGATAGCATATCAGAAGAGGGCTTTCACTACTTGGTGTTTGATTTAGTTACTGGAGGTGAACTGTT  296

Query  294  TGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTG  367
            ||||||.||.|||||..|.||.||.||||||||.||.|||||||||||.||.||.|||||||||||||||||||
Sbjct  297  TGAAGACATAGTGGCAAGAGAATACTACAGTGAAGCTGATGCCAGTCATTGCATTCAGCAGATCCTGGAGGCTG  370

Query  368  TGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTG----TTGCTGGCCTCCAA  437
            ||||.||||||||.||||||||.|||||.||.|||||||||||||||||||||.||    |.|||.|    |||
Sbjct  371  TGCTACACTGCCATCAGATGGGCGTGGTCCATCGGGACCTGAAGCCTGAGAATTTGCTTTTAGCTAG----CAA  440

Query  438  GCTCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGT  511
            ...||||||.||.||.|||||..||||||||||||||.|.||||||||.||..|.|||||.||||||||.||||
Sbjct  441  ATCCAAGGGAGCAGCTGTGAAATTGGCAGACTTTGGCTTAGCCATAGAAGTTCAAGGGGACCAGCAGGCGTGGT  514

Query  512  TTGGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGAC  585
            ||||.|||||.||.||.|||||||||||.||.||||||||..|.||.||.||.||.||.||.|||||.|||||.
Sbjct  515  TTGGTTTTGCTGGCACACCTGGATATCTTTCTCCAGAAGTTTTACGTAAAGATCCTTATGGAAAGCCAGTGGAT  588

Query  586  CTGTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCG  659
            .|||||||.|||||.|||||.||.||.||.||.||.||.|||||.||.||.|||||||||||.|||||.|||.|
Sbjct  589  ATGTGGGCATGTGGTGTCATTCTCTATATTCTACTTGTGGGGTATCCACCCTTCTGGGATGAAGACCAACACAG  662

Query  660  CCTGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCC  733
            .||.||.|||||||||||.||.||.| ||||||||||.|||||.||.|||||||||||.||.||.||.||||||
Sbjct  663  ACTCTATCAGCAGATCAAGGCTGGAG-CTTATGATTTTCCATCACCAGAATGGGACACGGTGACTCCTGAAGCC  735

Query  734  AAGGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCCGAAGCCATTAAGCACCC  807
            ||.||.||.||||||||.|||||.||.||.|||||..||||||||||||||||..|.||.||..|.||||||||
Sbjct  736  AAAGACCTCATCAATAAAATGCTTACTATCAACCCTGCCAAACGCATCACAGCCTCAGAGGCACTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||||||..||.||.||.||.||.||.| |.|| |||||||||||||||||.||.||||||.|||||||.||.
Sbjct  810  ATGGATCTGTCAACGTTCTACTGTTGCTTCCATG-ATGCACAGACAGGAGACTGTAGACTGCTTGAAGAAATTT  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG  954
            |||||.||.||.|||||.|||||.|||||..|.||.||.||||||||.||.|||||.|||||   ||..|||||
Sbjct  883  AATGCTAGAAGAAAACTAAAGGGTGCCATCTTGACAACTATGCTGGCTACAAGGAATTTCTC---AGCCAAGAG  953

Query  955  ------------------TGG------GGGAAACAAGAA-----------------------------------  969
                              |||      |..||||||.||                                   
Sbjct  954  TTTGTTGAAGAAACCAGATGGAGTAAAGATAAACAACAAAGCCAACGTGGTAACCAGCCCCAAAGAAAATATTC  1027

Query  970  --------------GAGC--------------------------GATGGTGTGAAGGAATCCTCAGAGAGCACC  1003
                          ||||                          |||||....|||||.||..|.|||||..|.
Sbjct 1028  CTACCCCAGCGCTGGAGCCCCAAACTACTGTAATCCACAACCCTGATGGAAACAAGGAGTCAACTGAGAGTTCA  1101

Query 1004  AACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGA  1077
            ||.||.||.||.|||||||||||....||||..||.||.||.||.|||||.|||||.||.||.||.|||||.||
Sbjct 1102  AATACAACAATTGAGGATGAAGATGTGAAAGCACGAAAGCAAGAGATTATCAAAGTCACTGAACAACTGATCGA  1175

Query 1078  AGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGG  1151
            |||.||.|.||||||.||.|||||..|||||||.||.||.||.|||||.|||.|.||.||.||.||||||||.|
Sbjct 1176  AGCTATCAACAATGGGGACTTTGAAGCCTACACAAAAATCTGTGACCCAGGCCTTACTGCTTTTGAACCTGAAG  1249

Query 1152  CCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG--TGGTCCCGGAACAGC-  1222
            |..||||.||..|.||.||.||..||||.||.||.||||||||.||||||||  ||  |.||||   ||.||| 
Sbjct 1250  CTTTGGGTAATTTAGTGGAAGGGATGGATTTTCACCGATTCTACTTTGAAAA--TGCTTTGTCC---AAAAGCA  1318

Query 1223  --AAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC  1294
              ||.||..|.|||||.|..||.||.||.||.||..|.||.|||.|.||.||.||..|.||||||||.||.||.
Sbjct 1319  ATAAACCAATCCACACTATTATTCTAAACCCTCATGTACATCTGGTAGGGGATGATGCCGCCTGCATAGCATAT  1392

Query 1295  ATCCGCATCACGCAGTACCTGGACGCTGGC---GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTG  1365
            ||..|..||||.||||||.||||   ||||   ||.||.|||...||....|||||.||.|||||.|||||.||
Sbjct 1393  ATTAGGCTCACACAGTACATGGA---TGGCAGTGGAATGCCAAAGACAATGCAGTCAGAAGAGACTCGTGTGTG  1463

Query 1366  GCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCC------CC  1433
            ||||||||||||.||.||.|||||||..||.||.||.||..|.||.|||.|.||..|.||.|  ||      ||
Sbjct 1464  GCACCGCCGGGATGGAAAGTGGCAGAATGTTCATTTTCATCGCTCGGGGTCACCAACAGTAC--CCATCAAGCC  1535

Query 1434  AC-----------------------------------------------------------  1435
            ||                                                           
Sbjct 1536  ACCCTGTATTCCAAATGGGAAAGAAAACTTCTCAGGAGGCACCTCTTTGTGGCAAAACATC  1596