Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_006514469.2
- Aligned Length:
- 1898
- Identities:
- 1166
- Gaps:
- 480
Alignment
Query 1 ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT 70
|||||||||| |.|||||||||||.|||||.||.|||||||||||.|.|||||| ||| ||||||||.||.|
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATT-GGCAAGGGGGCTT 73
Query 71 TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA 143
||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||.||.||.|||||
Sbjct 74 TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAA 146
Query 144 GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG 217
||||||.||||||||.||.|||||.||||||.|.|||||.||.||||||||||||||||||||..|||||||.|
Sbjct 147 GCTGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTG 220
Query 218 TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG 291
|.||.||.||||||||||||||.||.|||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct 221 TACGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC 294
Query 292 TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 365
||||||||.||||||||..|.|||||.||||||||.||.||||||||||||||.|||||||||||||||||.||
Sbjct 295 TTTGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGC 368
Query 366 TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC 439
|||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||||||||.|||.|.||||||..|||..
Sbjct 369 TGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAAT 442
Query 440 TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT 513
.|||.||.|||||||||||||||||||||||.|||||||||||.|||||..||||.||.|||||||||||||||
Sbjct 443 GCAAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTT 516
Query 514 GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT 587
||.|||||.||.||.||.||.||.||.||.||.||.||.||.||||||||..|.|||||.||.|||||||||.|
Sbjct 517 GGATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACAT 590
Query 588 GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC 661
.|||||.||||||||.||||||||.|||||||||||.||.|||||.||.|||||||||||||||||.|||...|
Sbjct 591 CTGGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGC 664
Query 662 TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA 735
||||||||||||||||.||.|| |.|.||||||||||||||.||.||.||||||||.||.||.||.||||||||
Sbjct 665 TGTACCAGCAGATCAAGGCTGG-GGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAA 737
Query 736 GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC 807
..|.||.|||||..|||||||||||||.|||||..||||.||||||||.|| || ||.|||.|.||||||||
Sbjct 738 AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGC--CCATGAGGCCCTGAAGCACCC 809
Query 808 CTGGATCTCGCACCGCTCCACCGTGGCATC-GTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC 880
.|||.|||..||.||.|||||||||||.|| .|| |||||||||||||||||.|||||.||.||||||||||||
Sbjct 810 ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATG-ATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTC 882
Query 881 AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG 954
|||||.||||||||.||.|||||||||||.||||||||.|||||||||||..||||.|||||.|.||..|||||
Sbjct 883 AATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAG 956
Query 955 TGGGGGAAACAAGAAGAGC-GATGGTGTGAA------------------------------------------- 984
|......|||||||| ||| |||||.||.||
Sbjct 957 TTTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGC 1029
Query 985 -----------------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACAC 1029
||||||.||.||.|||||||||||.|||||.|||||||||||..|
Sbjct 1030 CCCAAAGGATCTCTCCCTCCTGCTGCCCTGGAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGC 1103
Query 1030 CAAAG-------------TG------------------------------------------------------ 1036
||||| ||
Sbjct 1104 CAAAGCCCCCAGGGTCCCTGATGTCCTGAGCTTGGTGAGGAGGGCCTCAGGAGCCCCCGAAGCCGAGGGCCCCC 1177
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1178 TCTCCTGCCAATCTCCAGTTCCCATTAGCCCCCTTCCAACCCCGTCCCCCAGGATCTCTGACATCCTGAACTCA 1251
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1252 GTGAGAAGGGGCTGTGGAACCCCAGAAGCCGAGGGACCCCTATCAGTGGGGCCCCCACCCTGCTTGTCTCCGGG 1325
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1326 TCTCCTAGGCCCCCTGCCCACCCCGTCCCCCAGGATCTCTGACATCCTCAACTCAGTGAGGCGGGGCTCAGGGA 1399
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1400 CCCCAGAAGCTGAGGGCCTCCCACCAGTGGGCCCCCCACCCTGCCCATCTCCGACTCTCCCTGGCCCCTTGCCC 1473
Query 1037 ---------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGA 1101
|||||.||||||||.||.||....|||||||||||.|||||.|||.|.|.||||||.||.|||||
Sbjct 1474 ACCCCATCCCGGAAGCAGGAAATCATCAAGACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGA 1547
Query 1102 GTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCC 1175
|.||||..||||.||.||.|||||.|||.||||..|.||.||.|||||.||.|||||.||||||||.||.||..
Sbjct 1548 GGCCTATGCGAAAATCTGTGACCCAGGCCTGACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGA 1621
Query 1176 TGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAA 1248
||||.|||||..|||||||.|||||.|||||| ||| ||..||||||||||||..|.|||||||||||||||||
Sbjct 1622 TGGATTTCCACAGATTCTACTTTGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACCACCATCCTGAA 1694
Query 1249 TCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTG 1322
.||.|||.|.|||.|.||.|||||.||..|.||.||||||||||||||||||.||||.||||||.| ||.||
Sbjct 1695 CCCGCACGTGCACGTCATTGGCGAGGATGCGGCATGCATCGCCTACATCCGCCTCACACAGTACAT---CGATG 1765
Query 1323 GC---GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATC 1393
|| ||||..||.||.|||..||||||.||.|||||||||||.|||||||||||.||||||||.|||||||..
Sbjct 1766 GCCAGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAAT 1839
Query 1394 GTCCACTTCCACAGATCTGGGGCGCCCTCC-GTCCTGCCCCAC----- 1435
||.||.||||||.| ||.||||| |||| || .|||||.|
Sbjct 1840 GTACATTTCCACTG--CTCGGGCG--CTCCAGT--GGCCCCGCTGCAG 1881
