Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_006514475.1
• Aligned Length: 1599
• Identities: 1168
• Gaps: 182

Alignment

Query    1  ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT  70
            ||||||||||   |.|||||||||||.|||||.||.|||||||||||.|.|||||| ||| ||||||||.||.|
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATT-GGCAAGGGGGCTT  73

Query   71  TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA  143
            ||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||.||.||.|||||
Sbjct   74  TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAA  146

Query  144  GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG  217
            ||||||.||||||||.||.|||||.||||||.|.|||||.||.||||||||||||||||||||..|||||||.|
Sbjct  147  GCTGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTG  220

Query  218  TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG  291
            |.||.||.||||||||||||||.||.|||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct  221  TACGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC  294

Query  292  TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  365
            ||||||||.||||||||..|.|||||.||||||||.||.||||||||||||||.|||||||||||||||||.||
Sbjct  295  TTTGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGC  368

Query  366  TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC  439
            |||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||||||||.|||.|.||||||..|||..
Sbjct  369  TGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAAT  442

Query  440  TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT  513
            .|||.||.|||||||||||||||||||||||.|||||||||||.|||||..||||.||.|||||||||||||||
Sbjct  443  GCAAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTT  516

Query  514  GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT  587
            ||.|||||.||.||.||.||.||.||.||.||.||.||.||.||||||||..|.|||||.||.|||||||||.|
Sbjct  517  GGATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACAT  590

Query  588  GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC  661
            .|||||.||||||||.||||||||.|||||||||||.||.|||||.||.|||||||||||||||||.|||...|
Sbjct  591  CTGGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGC  664

Query  662  TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA  735
            ||||||||||||||||.||.|| |.|.||||||||||||||.||.||.||||||||.||.||.||.||||||||
Sbjct  665  TGTACCAGCAGATCAAGGCTGG-GGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAA  737

Query  736  GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC  807
            ..|.||.|||||..|||||||||||||.|||||..||||.||||||||.||  ||  ||.|||.|.||||||||
Sbjct  738  AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGC--CCATGAGGCCCTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCATC-GTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||.|||..||.||.|||||||||||.|| .|| |||||||||||||||||.|||||.||.||||||||||||
Sbjct  810  ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATG-ATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTC  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA-  953
            |||||.||||||||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.||| 
Sbjct  883  AATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCT-CAGTGGGCAGAC  955

Query  954  -----------------------------------------------------GTGGGGGA-------------  961
                                                                 .|||.|||             
Sbjct  956  AGACCACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGT  1029

Query  962  ------AACAAGAAGAGC-GATGGTGTGAA--------------------------------------------  984
                  |||||||| ||| |||||.||.||                                            
Sbjct 1030  TTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGCC  1102

Query  985  ----------------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACACC  1030
                                        ||||||.||.||.|||||||||||.|||||.|||||||||||..||
Sbjct 1103  CCAAAGGATCTCTCCCTCCTGCTGCCCTGGAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGCC  1176

Query 1031  AAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTC  1104
            ||||..|||||.||||||||.||.||....|||||||||||.|||||.|||.|.|.||||||.||.||||||.|
Sbjct 1177  AAAGCCCGGAAGCAGGAAATCATCAAGACCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGC  1250

Query 1105  CTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGG  1178
            |||..||||.||.||.|||||.|||.||||..|.||.||.|||||.||.|||||.||||||||.||.||..|||
Sbjct 1251  CTATGCGAAAATCTGTGACCCAGGCCTGACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGG  1324

Query 1179  ACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCC  1251
            |.|||||..|||||||.|||||.|||||| ||| ||..||||||||||||..|.|||||||||||||||||.||
Sbjct 1325  ATTTCCACAGATTCTACTTTGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCC  1397

Query 1252  CCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC-  1324
            .|||.|.|||.|.||.|||||.||..|.||.||||||||||||||||||.||||.||||||.|   ||.|||| 
Sbjct 1398  GCACGTGCACGTCATTGGCGAGGATGCGGCATGCATCGCCTACATCCGCCTCACACAGTACAT---CGATGGCC  1468

Query 1325  --GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTC  1396
              ||||..||.||.|||..||||||.||.|||||||||||.|||||||||||.||||||||.|||||||..||.
Sbjct 1469  AGGGCAGACCCCGTACCAGCCAGTCCGAAGAGACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTA  1542

Query 1397  CACTTCCACAGATCTGGGGCGCCCTCC-GTCCTGCCCCAC-----  1435
            ||.||||||.|  ||.|||||  |||| ||  .|||||.|     
Sbjct 1543  CATTTCCACTG--CTCGGGCG--CTCCAGT--GGCCCCGCTGCAG  1581