Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_006514477.1
• Aligned Length: 1571
• Identities: 1163
• Gaps: 156

Alignment

Query    1  ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT  70
            ||||||||||   |.|||||||||||.|||||.||.|||||||||||.|.|||||| ||| ||||||||.||.|
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGTTTCACCGACGAGTACCAGCTATACGAGGATATT-GGCAAGGGGGCTT  73

Query   71  TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA  143
            ||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||.||.||.|||||
Sbjct   74  TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGTACCGGCCATGAGTATGCAGCCAAGATCATTAATACCAAGAA  146

Query  144  GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG  217
            ||||||.||||||||.||.|||||.||||||.|.|||||.||.||||||||||||||||||||..|||||||.|
Sbjct  147  GCTGTCGGCCAGAGATCACCAGAAACTGGAGAGAGAAGCTCGGATCTGCCGCCTGCTGAAGCATTCCAACATTG  220

Query  218  TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG  291
            |.||.||.||||||||||||||.||.|||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct  221  TACGCCTCCATGACAGCATCTCTGAAGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC  294

Query  292  TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  365
            ||||||||.||||||||..|.|||||.||||||||.||.||||||||||||||.|||||||||||||||||.||
Sbjct  295  TTTGAAGACATCGTGGCAAGAGAGTACTACAGTGAAGCTGATGCCAGTCACTGCATCCAGCAGATCCTGGAAGC  368

Query  366  TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC  439
            |||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||||||||.|||.|.||||||..|||..
Sbjct  369  TGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCTGAGAACCTGCTTCTGGCCAGCAAAT  442

Query  440  TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT  513
            .|||.||.|||||||||||||||||||||||.|||||||||||.|||||..||||.||.|||||||||||||||
Sbjct  443  GCAAAGGCGCCGCAGTGAAGCTGGCAGACTTCGGCCTGGCCATCGAGGTTCAGGGAGACCAGCAGGCATGGTTT  516

Query  514  GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT  587
            ||.|||||.||.||.||.||.||.||.||.||.||.||.||.||||||||..|.|||||.||.|||||||||.|
Sbjct  517  GGATTTGCGGGAACGCCAGGCTACCTGTCTCCCGAGGTCCTTCGGAAGGAGGCCTACGGCAAACCTGTGGACAT  590

Query  588  GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC  661
            .|||||.||||||||.||||||||.|||||||||||.||.|||||.||.|||||||||||||||||.|||...|
Sbjct  591  CTGGGCATGTGGGGTGATCCTGTATATCCTGCTGGTGGGCTACCCACCTTTCTGGGATGAGGACCAACACAAGC  664

Query  662  TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA  735
            ||||||||||||||||.||.|| |.|.||||||||||||||.||.||.||||||||.||.||.||.||||||||
Sbjct  665  TGTACCAGCAGATCAAGGCTGG-GGCGTATGATTTCCCATCCCCTGAGTGGGACACCGTTACTCCTGAAGCCAA  737

Query  736  GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC  807
            ..|.||.|||||..|||||||||||||.|||||..||||.||||||||.||  ||  ||.|||.|.||||||||
Sbjct  738  AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACGGC--CCATGAGGCCCTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCATC-GTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||.|||..||.||.|||||||||||.|| .|| |||||||||||||||||.|||||.||.||||||||||||
Sbjct  810  ATGGGTCTGCCAACGTTCCACCGTGGCCTCTATG-ATGCACAGACAGGAGACTGTGGAATGTCTGAAGAAGTTC  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG  954
            |||||.||||||||.||.|||||||||||.||||||||.|||||||||||..||||.|||||   ||..|||||
Sbjct  883  AATGCAAGGAGGAAGCTCAAGGGAGCCATCCTCACCACTATGCTGGCCACACGGAATTTCTC---AGCCAAGAG  953

Query  955  TGGGGGAAACAAGAAGAGC-GATGGTG-----------------------------------------------  980
            |......|||||||| ||| |||||.|                                               
Sbjct  954  TTTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACAAACAGCACCAAAAACAGCTCGGCCATCACCAGC  1026

Query  981  ----------------------------------------------------------------------TGAA  984
                                                                                  |.||
Sbjct 1027  CCCAAAGGATCTCTCCCTCCTGCTGCCCTGGAGCCTCAAACCACCGTTATCCATAACCCAGTGGACGGGATTAA  1100

Query  985  GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAAAG  1058
            ||||||.||.||.|||||||||||.|||||.|||||||||||..||||||..|||||.||||||||.||.||..
Sbjct 1101  GGAATCTTCCGACAGCACCAACACAACCATAGAGGATGAAGATGCCAAAGCCCGGAAGCAGGAAATCATCAAGA  1174

Query 1059  TGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATG  1132
            ..|||||||||||.|||||.|||.|.|.||||||.||.||||||.||||..||||.||.||.|||||.|||.||
Sbjct 1175  CCACAGAGCAGCTCATTGAGGCCGTCAACAATGGGGACTTTGAGGCCTATGCGAAAATCTGTGACCCAGGCCTG  1248

Query 1133  ACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCT  1206
            ||..|.||.||.|||||.||.|||||.||||||||.||.||..||||.|||||..|||||||.|||||.|||||
Sbjct 1249  ACCTCATTTGAGCCTGAAGCTCTGGGCAACCTGGTCGAAGGGATGGATTTCCACAGATTCTACTTTGAGAACCT  1322

Query 1207  G-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCA  1279
            | ||| ||..||||||||||||..|.|||||||||||||||||.||.|||.|.|||.|.||.|||||.||..|.
Sbjct 1323  GCTGG-CCAAGAACAGCAAGCCGATCCACACCACCATCCTGAACCCGCACGTGCACGTCATTGGCGAGGATGCG  1395

Query 1280  GCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC---GGCATCCCACGCACCGCCCAGTCGGA  1350
            ||.||||||||||||||||||.||||.||||||.|   ||.||||   ||||..||.||.|||..||||||.||
Sbjct 1396  GCATGCATCGCCTACATCCGCCTCACACAGTACAT---CGATGGCCAGGGCAGACCCCGTACCAGCCAGTCCGA  1466

Query 1351  GGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCC-  1423
            .|||||||||||.|||||||||||.||||||||.|||||||..||.||.||||||.|  ||.|||||  |||| 
Sbjct 1467  AGAGACCCGTGTGTGGCACCGCCGCGACGGCAAGTGGCAGAATGTACATTTCCACTG--CTCGGGCG--CTCCA  1536

Query 1424  GTCCTGCCCCAC-----  1435
            ||  .|||||.|     
Sbjct 1537  GT--GGCCCCGCTGCAG  1551