Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_006714330.3
• Aligned Length: 1459
• Identities: 1081
• Gaps: 49

Alignment

Query    1  ATGG---CCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTT  71
            ||||   |.||||..|||||||||.|.||||||||.|||||.|||||.||||||||..|.||.|||||.||.||
Sbjct    1  ATGGCTTCGACCACAACCTGCACCAGGTTCACGGACGAGTATCAGCTTTTCGAGGAGCTTGGAAAGGGGGCATT  74

Query   72  CTCGGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGC  145
            |||.||||||.||||.|||.||||..|.|...||||.||.||.|||||||||||.||.||||||||.||.||||
Sbjct   75  CTCAGTGGTGAGAAGATGTATGAAAATTCCTACTGGACAAGAATATGCTGCCAAAATTATCAACACCAAAAAGC  148

Query  146  TGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTC  219
            |.||.||.||.||.||||||||.||.||..|.|||||..|.||||||||.||..||||||||||.||.||.||.
Sbjct  149  TTTCTGCTAGGGATCATCAGAAACTAGAAAGAGAAGCTAGAATCTGCCGTCTTTTGAAGCACCCTAATATTGTG  222

Query  220  CGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTT  293
            |||||.|||||.|||||.|||||.|||||....||||||.||.|.||.||..|.||.|||||.||.||||||||
Sbjct  223  CGACTTCATGATAGCATATCAGAAGAGGGCTTTCACTACTTGGTGTTTGATTTAGTTACTGGAGGTGAACTGTT  296

Query  294  TGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTG  367
            ||||||.||.|||||..|.||.||.||||||||.||.|||||||||||.||.||.|||||||||||||||||||
Sbjct  297  TGAAGACATAGTGGCAAGAGAATACTACAGTGAAGCTGATGCCAGTCATTGCATTCAGCAGATCCTGGAGGCTG  370

Query  368  TGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTG----TTGCTGGCCTCCAA  437
            ||||.||||||||.||||||||.|||||.||.|||||||||||||||||||||.||    |.|||.|    |||
Sbjct  371  TGCTACACTGCCATCAGATGGGCGTGGTCCATCGGGACCTGAAGCCTGAGAATTTGCTTTTAGCTAG----CAA  440

Query  438  GCTCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGT  511
            ...||||||.||.||.|||||..||||||||||||||.|.||||||||.||..|.|||||.||||||||.||||
Sbjct  441  ATCCAAGGGAGCAGCTGTGAAATTGGCAGACTTTGGCTTAGCCATAGAAGTTCAAGGGGACCAGCAGGCGTGGT  514

Query  512  TTGGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGAC  585
            ||||.|||||.||.||.|||||||||||.||.||||||||..|.||.||.||.||.||.||.|||||.|||||.
Sbjct  515  TTGGTTTTGCTGGCACACCTGGATATCTTTCTCCAGAAGTTTTACGTAAAGATCCTTATGGAAAGCCAGTGGAT  588

Query  586  CTGTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCG  659
            .|||||||.|||||.|||||.||.||.||.||.||.||.|||||.||.||.|||||||||||.|||||.|||.|
Sbjct  589  ATGTGGGCATGTGGTGTCATTCTCTATATTCTACTTGTGGGGTATCCACCCTTCTGGGATGAAGACCAACACAG  662

Query  660  CCTGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCC  733
            .||.||.|||||||||||.||.||.| ||||||||||.|||||.||.|||||||||||.||.||.||.||||||
Sbjct  663  ACTCTATCAGCAGATCAAGGCTGGAG-CTTATGATTTTCCATCACCAGAATGGGACACGGTGACTCCTGAAGCC  735

Query  734  AAGGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCCGAAGCCATTAAGCACCC  807
            ||.||.||.||||||||.|||||.||.||.|||||..||||||||||||||||..|.||.||..|.||||||||
Sbjct  736  AAAGACCTCATCAATAAAATGCTTACTATCAACCCTGCCAAACGCATCACAGCCTCAGAGGCACTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||||||..||.||.||.||.||.||.| |.|| |||||||||||||||||.||.||||||.|||||||.||.
Sbjct  810  ATGGATCTGTCAACGTTCTACTGTTGCTTCCATG-ATGCACAGACAGGAGACTGTAGACTGCTTGAAGAAATTT  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA-  953
            |||||.||.||.|||||.|||||.|||||..|.||.||.||||||||.||.|||||.|||||.|.||..|||| 
Sbjct  883  AATGCTAGAAGAAAACTAAAGGGTGCCATCTTGACAACTATGCTGGCTACAAGGAATTTCTCAGCAGCCAAGAG  956

Query  954  ---GTGGGGGAAACAAGAAGAGCGATGGTGTGAAGGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAA  1024
               ||.|..|||||.|       |||||.||.|||||.||..|.|||||..|.||.||.||.||.|||||||||
Sbjct  957  TTTGTTGAAGAAACCA-------GATGGAGTAAAGGAGTCAACTGAGAGTTCAAATACAACAATTGAGGATGAA  1023

Query 1025  GACACCAAAGTGCGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTT  1098
            ||....||||..||.||.||.||.|||||.|||||.||.||.||.|||||.|||||.||.|.||||||.||.||
Sbjct 1024  GATGTGAAAGCACGAAAGCAAGAGATTATCAAAGTCACTGAACAACTGATCGAAGCTATCAACAATGGGGACTT  1097

Query 1099  TGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGG  1172
            |||..|||||||.||.||.||.|||||.|||.|.||.||.||.||||||||.||..||||.||..|.||.||.|
Sbjct 1098  TGAAGCCTACACAAAAATCTGTGACCCAGGCCTTACTGCTTTTGAACCTGAAGCTTTGGGTAATTTAGTGGAAG  1171

Query 1173  GCCTGGACTTCCATCGATTCTATTTTGAAAACCTG--TGGTCCCGGAACAGC---AAGCCCGTGCACACCACCA  1241
            |..||||.||.||.||||||||.||||||||  ||  |.||||   ||.|||   ||.||..|.|||||.|..|
Sbjct 1172  GGATGGATTTTCACCGATTCTACTTTGAAAA--TGCTTTGTCC---AAAAGCAATAAACCAATCCACACTATTA  1240

Query 1242  TCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTG  1315
            |.||.||.||.||..|.||.|||.|.||.||.||..|.||||||||.||.||.||..|..||||.||||||.||
Sbjct 1241  TTCTAAACCCTCATGTACATCTGGTAGGGGATGATGCCGCCTGCATAGCATATATTAGGCTCACACAGTACATG  1314

Query 1316  GACGCTGGC---GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATG  1386
            ||   ||||   ||.||.|||...||....|||||.||.|||||.|||||.||||||||||||||.||.||.||
Sbjct 1315  GA---TGGCAGTGGAATGCCAAAGACAATGCAGTCAGAAGAGACTCGTGTGTGGCACCGCCGGGATGGAAAGTG  1385

Query 1387  GCAGATCGTCCACTTCCACAGATCTGGGGCGCCCTCCGTCCTGCCCCAC----  1435
            |||||..||.||.||.||..|.||.|||.|.||..|.||    .||||.    
Sbjct 1386  GCAGAATGTTCATTTTCATCGCTCGGGGTCACCAACAGT----ACCCATCAAG  1434