Nucleotide Global Alignment

Description

• Query: ccsbBroad304_14562
• Subject: XM_006715781.2
• Aligned Length: 1897
• Identities: 1162
• Gaps: 481

Alignment

Query    1  ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT  70
            ||||||||||   |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct    1  ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT  73

Query   71  TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA  143
            ||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct   74  TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA  146

Query  144  GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG  217
            |||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct  147  GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG  220

Query  218  TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG  291
            |.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct  221  TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC  294

Query  292  TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  365
            ||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct  295  TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC  368

Query  366  TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC  439
            .||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct  369  CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT  442

Query  440  TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT  513
            .|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct  443  GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT  516

Query  514  GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT  587
            ||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct  517  GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT  590

Query  588  GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC  661
            .|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct  591  CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC  664

Query  662  TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA  735
            ||||||||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||
Sbjct  665  TGTACCAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAA  737

Query  736  GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC  807
            ..|.||.|||||..|||||||||||||.|||||..||||.|||||||||||  ||  ||.|||.|.||||||||
Sbjct  738  AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCC  809

Query  808  CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC  880
            .|||.|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.||||||
Sbjct  810  GTGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC  882

Query  881  AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG  954
            |||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||||   ||..|||||
Sbjct  883  AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC---AGCCAAGAG  953

Query  955  TGGGGGAAACAAGAAGAGC-GATGGTGTGAA-------------------------------------------  984
            |......|||||||| ||| |||||.||.||                                           
Sbjct  954  TTTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGC  1026

Query  985  -----------------------------GGAATCCTCAGAGAGCACCAACACCACCATCGAGGATGAAGACAC  1029
                                         |||.||.||.||.||..||||.||||||||.||||||||||||.|
Sbjct 1027  CCCAAAGGGACGCTTCCTCCTGCCGCCCTGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGC  1100

Query 1030  CAAAG---------------------TG----------------------------------------------  1036
            .||||                     ||                                              
Sbjct 1101  TAAAGCCCCCAGGGTCCCCGACATCCTGAGCTCAGTGAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCC  1174

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1175  TGCCCTGCCCATCTCCGGCTCCCTTTAGCCCCCTGCCAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCT  1248

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1249  GTGAGAAGGGGTTCAGGAACCCCAGAAGCCGAGGGCCCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGC  1322

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1323  TCTCCTAGGCCCCCTGTCCTCCCCGTCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGA  1396

Query 1037  --------------------------------------------------------------------------  1036
                                                                                      
Sbjct 1397  CCCCAGAAGCCGAGGGCCCCTCGCCAGTGGGGCCCCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCC  1470

Query 1037  ---------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGA  1101
                     |||||.|||||.||.||.||....||.||||||||.||.||.|||.|.|.|||.||.||.|||||
Sbjct 1471  ACCCCATCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGA  1544

Query 1102  GTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCC  1175
            |.|||||.||||.||.||.|||||.||..||||..|.||.||.|||||.||.|||||.|||||||||||.||..
Sbjct 1545  GGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGA  1618

Query 1176  TGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAA  1248
            ||||||||||..|||||||.||.||.|||||| ||| ||..||||||||||||..|.|||||.|||||||||||
Sbjct 1619  TGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAA  1691

Query 1249  TCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTG  1322
            .||.|||.|.|||.|.||.||.||.||..|.|||||||||||.||||||||..|||||||||||.|.||||  |
Sbjct 1692  CCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--G  1763

Query 1323  GC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCG  1394
            ||  |||...||.||||||..||||||.|||||||||||.||.|||||||||||.||||||||.|||||||.||
Sbjct 1764  GCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACG  1837

Query 1395  TCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC-----  1435
            |.|||||||||.|  ||.|||||| |||..|    |||||.|     
Sbjct 1838  TGCACTTCCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG  1878