Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_011515552.1
- Aligned Length:
- 2071
- Identities:
- 1165
- Gaps:
- 655
Alignment
Query 1 ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT 70
|||||||||| |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT 73
Query 71 TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA 143
||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct 74 TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA 146
Query 144 GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG 217
|||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct 147 GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG 220
Query 218 TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG 291
|.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct 221 TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC 294
Query 292 TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 365
||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct 295 TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 368
Query 366 TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC 439
.||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct 369 CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT 442
Query 440 TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT 513
.|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct 443 GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT 516
Query 514 GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT 587
||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct 517 GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT 590
Query 588 GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC 661
.|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct 591 CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC 664
Query 662 TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA 735
||||||||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||
Sbjct 665 TGTACCAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAA 737
Query 736 GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC 807
..|.||.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||
Sbjct 738 AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCC 809
Query 808 CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC 880
.|||.|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.||||||
Sbjct 810 GTGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
Query 881 AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG 954
|||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.||||| ||..|||||
Sbjct 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC---AGCCAAGAG 953
Query 955 TGGGGGAAACAAGAAGAGC-GATGGTGTGAAG--------GAAT------------------------------ 989
|......|||||||| ||| |||||.||.||| ||||
Sbjct 954 TTTACTCAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGC 1026
Query 990 ---------------------------------CCTCA------------------------------------ 994
|||||
Sbjct 1027 CCCAAAGGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAA 1100
Query 995 ----------GAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAG---------------------TG- 1036
||.||..||||.||||||||.||||||||||||.|.|||| ||
Sbjct 1101 GGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCCCAGGGTCCCCGACATCCTGA 1174
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1175 GCTCAGTGAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTTAGC 1248
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1249 CCCCTGCCAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGAAGGGGTTCAGGAACCCCAGAAGC 1322
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1323 CGAGGGCCCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGCTCTCCTAGGCCCCCTGTCCTCCCCGTCCC 1396
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1397 CCAGGATCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCAGAAGCCGAGGGCCCCTCGCCAGTG 1470
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1471 GGGCCCCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCACCCCATGGATGGATGACATCCCAGGGCT 1544
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1545 GCTGCCACCCCCACCTGTGGGGAGACACCAGACTGGGGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCTGG 1618
Query 1037 -----------------------------------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATT 1075
|||||.|||||.||.||.||....||.||||||||.||.
Sbjct 1619 GCCACGGGCTCGGCATGGCAGGGCAGTGGCTAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATC 1692
Query 1076 GAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGA 1149
||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|.||.||.|||||
Sbjct 1693 GAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGA 1766
Query 1150 GGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGC 1222
.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| ||| ||..|||||||
Sbjct 1767 AGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGC 1839
Query 1223 AAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACAT 1296
|||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.|||||||||||.|||||
Sbjct 1840 AAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACAT 1913
Query 1297 CCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCA 1368
|||..|||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||||||||.||.|||||
Sbjct 1914 CCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCA 1985
Query 1369 CCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC----- 1435
||||||.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||..| |||||.|
Sbjct 1986 CCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG 2052
