Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_011515556.1
- Aligned Length:
- 1999
- Identities:
- 1165
- Gaps:
- 580
Alignment
Query 1 ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT 70
|||||||||| |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT 73
Query 71 TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA 143
||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct 74 TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA 146
Query 144 GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG 217
|||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct 147 GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG 220
Query 218 TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG 291
|.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct 221 TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC 294
Query 292 TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 365
||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct 295 TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 368
Query 366 TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC 439
.||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct 369 CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT 442
Query 440 TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT 513
.|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct 443 GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT 516
Query 514 GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT 587
||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct 517 GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT 590
Query 588 GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC 661
.|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct 591 CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC 664
Query 662 TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA 735
||||||||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||
Sbjct 665 TGTACCAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAA 737
Query 736 GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC 807
..|.||.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||
Sbjct 738 AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCC 809
Query 808 CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC 880
.|||.|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.||||||
Sbjct 810 GTGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
Query 881 AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG 954
|||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||||.|.||..|||||
Sbjct 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTCAGCAGCCAAGAG 956
Query 955 TGGGGGAAACAAGAAGAGC-GATGGTGTGAAGGA----------------ATCC-------------------- 991
|......|||||||| ||| |||||.||.||||| ||||
Sbjct 957 TTTACTCAACAAGAA-AGCAGATGGAGTCAAGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATT 1029
Query 992 ---------TCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAG---------------------T 1035
||.||.||..||||.||||||||.||||||||||||.|.|||| |
Sbjct 1030 AAGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCCCAGGGTCCCCGACATCCT 1103
Query 1036 G------------------------------------------------------------------------- 1036
|
Sbjct 1104 GAGCTCAGTGAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTTA 1177
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1178 GCCCCCTGCCAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGAAGGGGTTCAGGAACCCCAGAA 1251
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1252 GCCGAGGGCCCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGCTCTCCTAGGCCCCCTGTCCTCCCCGTC 1325
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1326 CCCCAGGATCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCAGAAGCCGAGGGCCCCTCGCCAG 1399
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1400 TGGGGCCCCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCACCCCATGGATGGATGACATCCCAGGG 1473
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1474 CTGCTGCCACCCCCACCTGTGGGGAGACACCAGACTGGGGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCT 1547
Query 1037 -------------------------------------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGA 1073
|||||.|||||.||.||.||....||.||||||||.|
Sbjct 1548 GGGCCACGGGCTCGGCATGGCAGGGCAGTGGCTAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCA 1621
Query 1074 TTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCT 1147
|.||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|.||.||.|||
Sbjct 1622 TCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCT 1695
Query 1148 GAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACA 1220
||.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| ||| ||..|||||
Sbjct 1696 GAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACA 1768
Query 1221 GCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTAC 1294
|||||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.|||||||||||.|||
Sbjct 1769 GCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTAC 1842
Query 1295 ATCCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGG 1366
|||||..|||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||||||||.||.|||
Sbjct 1843 ATCCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGG 1914
Query 1367 CACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC---- 1435
||||||||.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||..| |||||.|
Sbjct 1915 CACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCA 1982
Query 1436 - 1435
Sbjct 1983 G 1983