Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_011515559.2
- Aligned Length:
- 2139
- Identities:
- 841
- Gaps:
- 1103
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct 1 --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA 60
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct 61 GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT 134
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct 135 CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG 208
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
|.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct 209 CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC 282
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
|||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct 283 CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC 355
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA 812
|.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||.|||.
Sbjct 356 TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG 427
Query 813 TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC 885
|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 428 TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 500
Query 886 CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA------ 953
||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 501 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGACC 573
Query 954 ------------------------------------------------GTGGGGGA------------------ 961
.|||.|||
Sbjct 574 ACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACT 647
Query 962 -AACAAGAAGAGC-GATGGTGTGAAG--------GAAT------------------------------------ 989
|||||||| ||| |||||.||.||| ||||
Sbjct 648 CAACAAGAA-AGCAGATGGAGTCAAGCCCCAGACGAATAGCACCAAAAACAGTGCAGCCGCCACCAGCCCCAAA 720
Query 990 ---------------------------CCTCA------------------------------------------ 994
|||||
Sbjct 721 GGGACGCTTCCTCCTGCCGCCCTGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAGTC 794
Query 995 ----GAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAG---------------------TG------- 1036
||.||..||||.||||||||.||||||||||||.|.|||| ||
Sbjct 795 TTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCCCAGGGTCCCCGACATCCTGAGCTCAG 868
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 869 TGAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTTAGCCCCCTG 942
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 943 CCAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGAAGGGGTTCAGGAACCCCAGAAGCCGAGGG 1016
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1017 CCCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGCTCTCCTAGGCCCCCTGTCCTCCCCGTCCCCCAGGA 1090
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1091 TCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCAGAAGCCGAGGGCCCCTCGCCAGTGGGGCCC 1164
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1165 CCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCACCCCATGGATGGATGACATCCCAGGGCTGCTGCC 1238
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1239 ACCCCCACCTGTGGGGAGACACCAGACTGGGGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCTGGGCCACG 1312
Query 1037 -----------------------------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAGCC 1081
|||||.|||||.||.||.||....||.||||||||.||.||.|||
Sbjct 1313 GGCTCGGCATGGCAGGGCAGTGGCTAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGGCC 1386
Query 1082 ATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCCCT 1155
.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|.||.||.|||||.||.||
Sbjct 1387 GTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCACT 1460
Query 1156 GGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGCCC 1228
|||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| ||| ||..||||||||||||.
Sbjct 1461 GGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGCCG 1533
Query 1229 GTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGCAT 1302
.|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.|||||||||||.||||||||..|
Sbjct 1534 ATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGGCT 1607
Query 1303 CACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGCCG 1374
||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||||||||.||.|||||||||||
Sbjct 1608 CACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGCCG 1679
Query 1375 GGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC----- 1435
.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||..| |||||.|
Sbjct 1680 CGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG 1740
