Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_017012663.2
- Aligned Length:
- 2067
- Identities:
- 840
- Gaps:
- 1031
Alignment
Query 1 ATGGCCACCATCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGAATTGGGCAAGGGAGCCTTCTC 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GGTGGTGCGAAGGTGTGTGAAGGTGCTGGCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAAGCTGT 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 CAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCGTCCGA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 CTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTGTTTGA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 AGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGCTGTGC 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 TGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGCTCAAG 444
||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||..|||.
Sbjct 1 --------------ATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGTGCAAA 60
Query 445 GGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTTGGGTT 518
||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||||.||
Sbjct 61 GGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTTGGTTT 134
Query 519 TGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCTGTGGG 592
.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|.||||
Sbjct 135 CGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACATCTGGG 208
Query 593 CTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCCTGTAC 666
|.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...||||||
Sbjct 209 CATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGCTGTAC 282
Query 667 CAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAAGGATC 740
|||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||..|.|
Sbjct 283 CAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAAAAACC 355
Query 741 TGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCCCTGGA 812
|.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||.|||.
Sbjct 356 TCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCCGTGGG 427
Query 813 TCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTCAATGC 885
|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 428 TCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTCAATGC 500
Query 886 CAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGA------ 953
||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.|||| |.|.|||.|||
Sbjct 501 CAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCT-CAGTGGGCAGACAGACC 573
Query 954 ------------------------------------------------GTGGGGGA------------------ 961
.|||.|||
Sbjct 574 ACCGCTCCGGCCACAATGTCCACCGCGGCCTCCGGCACCACCATGGGGCTGGTGGAACAAGCCAAGAGTTTACT 647
Query 962 -AACAAGAAGAGC-GATGGTGTGAAGGA----------------ATCC-------------------------- 991
|||||||| ||| |||||.||.||||| ||||
Sbjct 648 CAACAAGAA-AGCAGATGGAGTCAAGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATTAAGGAG 720
Query 992 ---TCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAG---------------------TG----- 1036
||.||.||..||||.||||||||.||||||||||||.|.|||| ||
Sbjct 721 TCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCCCAGGGTCCCCGACATCCTGAGCTC 794
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 795 AGTGAGGAGGGGCTCGGGAGCCCCAGAAGCCGAGGGGCCCCTGCCCTGCCCATCTCCGGCTCCCTTTAGCCCCC 868
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 869 TGCCAGCCCCATCCCCCAGGATCTCTGACATCCTGAACTCTGTGAGAAGGGGTTCAGGAACCCCAGAAGCCGAG 942
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 943 GGCCCCCTCTCAGCGGGGCCCCCGCCCTGCCTGTCTCCGGCTCTCCTAGGCCCCCTGTCCTCCCCGTCCCCCAG 1016
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1017 GATCTCTGACATCCTGAACTCTGTGAGGAGGGGCTCAGGGACCCCAGAAGCCGAGGGCCCCTCGCCAGTGGGGC 1090
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1091 CCCCGCCCTGCCCATCTCCGACTATCCCTGGCCCCCTGCCCACCCCATGGATGGATGACATCCCAGGGCTGCTG 1164
Query 1037 -------------------------------------------------------------------------- 1036
Sbjct 1165 CCACCCCCACCTGTGGGGAGACACCAGACTGGGGGTGGTGTGGAGATACTCTTAGAGAAGAGGCTGCTGGGCCA 1238
Query 1037 -------------------------------CGGAAACAGGAAATTATAAAAGTGACAGAGCAGCTGATTGAAG 1079
|||||.|||||.||.||.||....||.||||||||.||.||.|
Sbjct 1239 CGGGCTCGGCATGGCAGGGCAGTGGCTAGCCCGGAAGCAGGAGATCATTAAGACCACGGAGCAGCTCATCGAGG 1312
Query 1080 CCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCATGACAGCCTTCGAACCTGAGGCC 1153
||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..||||..|.||.||.|||||.||.
Sbjct 1313 CCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGCTGACCTCGTTTGAGCCTGAAGCA 1386
Query 1154 CTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAACCTG-TGGTCCCGGAACAGCAAGC 1226
|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||||| ||| ||..|||||||||||
Sbjct 1387 CTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAACCTGCTGG-CCAAGAACAGCAAGC 1459
Query 1227 CCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGTCAGCCTGCATCGCCTACATCCGC 1300
|..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..|.|||||||||||.||||||||.
Sbjct 1460 CGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATGCCGCCTGCATCGCTTACATCCGG 1533
Query 1301 ATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGGAGGAGACCCGTGTCTGGCACCGC 1372
.|||||||||||.|.|||| ||| |||...||.||||||..||||||.|||||||||||.||.|||||||||
Sbjct 1534 CTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTGAGGAGACCCGCGTGTGGCACCGC 1605
Query 1373 CGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTCCGTCCTGCCCCAC----- 1435
||.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||..| |||||.|
Sbjct 1606 CGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTGTG----GCCCCGCTGCAG 1668
