Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_14562
- Subject:
- XM_017012665.1
- Aligned Length:
- 1498
- Identities:
- 1162
- Gaps:
- 82
Alignment
Query 1 ATGGCCACCA---TCACCTGCACCCGCTTCACGGAAGAGTACCAGCTCTTCGAGGA-ATTGGGCAAGGGAGCCT 70
|||||||||| |.|||||||||||||||||.||.|||||||||||||.|||||| ||| ||||||||.||.|
Sbjct 1 ATGGCCACCACGGTGACCTGCACCCGCTTCACCGACGAGTACCAGCTCTACGAGGATATT-GGCAAGGGGGCTT 73
Query 71 TCTCGGTGGTGCGAAGGTGTGTGAAGGTGCTG-GCTGGCCAGGAGTATGCTGCCAAGATCATCAACACAAAGAA 143
||||.|||||.|||.|.|||||.|||.| ||| .|.|||||.||||||||.|||||||||||||||||.|||||
Sbjct 74 TCTCTGTGGTCCGACGCTGTGTCAAGCT-CTGCACCGGCCATGAGTATGCAGCCAAGATCATCAACACCAAGAA 146
Query 144 GCTGTCAGCCAGAGACCATCAGAAGCTGGAGCGTGAAGCCCGCATCTGCCGCCTGCTGAAGCACCCCAACATCG 217
|||||||||||||||.||.||||||||||||.|.||.||.||.|||||||||||.||||||||..|||||||||
Sbjct 147 GCTGTCAGCCAGAGATCACCAGAAGCTGGAGAGAGAGGCTCGGATCTGCCGCCTTCTGAAGCATTCCAACATCG 220
Query 218 TCCGACTACATGACAGCATCTCAGAGGAGGGACACCACTACCTGATCTTCGACCTGGTCACTGGTGGGGAACTG 291
|.||.||.||.|||||||||||.||||||||...||||||||||.|||||||.|||||||||||||||||.||.
Sbjct 221 TGCGTCTCCACGACAGCATCTCCGAGGAGGGCTTCCACTACCTGGTCTTCGATCTGGTCACTGGTGGGGAGCTC 294
Query 292 TTTGAAGATATCGTGGCCCGGGAGTATTACAGTGAGGCGGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 365
||||||||.||.|||||..|.|||||.|||||.|||||.|||||||||||||||||||||||||||||||||||
Sbjct 295 TTTGAAGACATTGTGGCGAGAGAGTACTACAGCGAGGCTGATGCCAGTCACTGTATCCAGCAGATCCTGGAGGC 368
Query 366 TGTGCTGCACTGCCACCAGATGGGGGTGGTGCACCGGGACCTGAAGCCTGAGAATCTGTTGCTGGCCTCCAAGC 439
.||.||.||.||.|||||.||||||||.||.|||.|.|||||.|||||.|||||.|||.|.||||||..||||.
Sbjct 369 CGTTCTCCATTGTCACCAAATGGGGGTCGTCCACAGAGACCTCAAGCCGGAGAACCTGCTTCTGGCCAGCAAGT 442
Query 440 TCAAGGGTGCCGCAGTGAAGCTGGCAGACTTTGGCCTGGCCATAGAGGTGGAGGGGGAGCAGCAGGCATGGTTT 513
.|||.||.||.||||||||||||||||||||.|||||.||.||.||||||.|||||||.|||||||||||||||
Sbjct 443 GCAAAGGGGCTGCAGTGAAGCTGGCAGACTTCGGCCTAGCTATCGAGGTGCAGGGGGACCAGCAGGCATGGTTT 516
Query 514 GGGTTTGCAGGGACTCCTGGATATCTCTCCCCAGAAGTGCTGCGGAAGGACCCGTACGGGAAGCCTGTGGACCT 587
||.||.||.||.||.||.||.||.||.|||||.||.||.||.||.||.||..||||.||.||||||||||||.|
Sbjct 517 GGTTTCGCTGGCACACCAGGCTACCTGTCCCCTGAGGTCCTTCGCAAAGAGGCGTATGGCAAGCCTGTGGACAT 590
Query 588 GTGGGCTTGTGGGGTCATCCTGTACATCCTGCTGGTTGGGTACCCCCCGTTCTGGGATGAGGACCAGCACCGCC 661
.|||||.||||||||.|||||||||||||||||.||.||.|||||.||.||||||||.||||||||||||...|
Sbjct 591 CTGGGCATGTGGGGTGATCCTGTACATCCTGCTCGTGGGCTACCCACCCTTCTGGGACGAGGACCAGCACAAGC 664
Query 662 TGTACCAGCAGATCAAAGCCGGCGCCTTATGATTTCCCATCGCCGGAATGGGACACTGTCACCCCGGAAGCCAA 735
||||||||||||||||.||.||.||| |||||.|||||.||.||.||.||||||||.|||||.||.||||||||
Sbjct 665 TGTACCAGCAGATCAAGGCTGGTGCC-TATGACTTCCCGTCCCCTGAGTGGGACACCGTCACTCCTGAAGCCAA 737
Query 736 GGATCTGATCAATAAGATGCTGACCATTAACCCATCCAAACGCATCACAGCTGCC--GAAGCCATTAAGCACCC 807
..|.||.|||||..|||||||||||||.|||||..||||.||||||||||| || ||.|||.|.||||||||
Sbjct 738 AAACCTCATCAACCAGATGCTGACCATCAACCCTGCCAAGCGCATCACAGC--CCATGAGGCCCTGAAGCACCC 809
Query 808 CTGGATCTCGCACCGCTCCACCGTGGCAT-CGTGCATGCACAGACAGGAGACCGTGGACTGCCTGAAGAAGTTC 880
.|||.|||..||.||||||||.||.|||| |.|| |||||||||||||||||.|||||.||.|||||.||||||
Sbjct 810 GTGGGTCTGCCAACGCTCCACGGTAGCATCCATG-ATGCACAGACAGGAGACTGTGGAGTGTCTGAAAAAGTTC 882
Query 881 AATGCCAGGAGGAAACTGAAGGGAGCCATTCTCACCACGATGCTGGCCACCAGGAACTTCTCCGGAGGGAAGAG 954
|||||||||||.||.||.|||||||||||.||||||||.|||||||||||..||||.||||| ||..|||||
Sbjct 883 AATGCCAGGAGAAAGCTCAAGGGAGCCATCCTCACCACCATGCTGGCCACACGGAATTTCTC---AGCCAAGAG 953
Query 955 TGGGGGAAACAAGAAGAGC-GATGGTGTGAAGGA----------------ATCC-------------------- 991
|......|||||||| ||| |||||.||.||||| ||||
Sbjct 954 TTTACTCAACAAGAA-AGCAGATGGAGTCAAGGAGCCTCAAACCACCGTCATCCATAACCCAGTGGACGGGATT 1026
Query 992 ---------TCAGAGAGCACCAACACCACCATCGAGGATGAAGACACCAAAGTGCGGAAACAGGAAATTATAAA 1056
||.||.||..||||.||||||||.||||||||||||.|.||||..|||||.|||||.||.||.||
Sbjct 1027 AAGGAGTCTTCTGACAGTGCCAATACCACCATAGAGGATGAAGACGCTAAAGCCCGGAAGCAGGAGATCATTAA 1100
Query 1057 AGTGACAGAGCAGCTGATTGAAGCCATAAGCAATGGAGATTTTGAGTCCTACACGAAGATGTGCGACCCTGGCA 1130
....||.||||||||.||.||.|||.|.|.|||.||.||.||||||.|||||.||||.||.||.|||||.||..
Sbjct 1101 GACCACGGAGCAGCTCATCGAGGCCGTCAACAACGGTGACTTTGAGGCCTACGCGAAAATCTGTGACCCAGGGC 1174
Query 1131 TGACAGCCTTCGAACCTGAGGCCCTGGGGAACCTGGTTGAGGGCCTGGACTTCCATCGATTCTATTTTGAAAAC 1204
||||..|.||.||.|||||.||.|||||.|||||||||||.||..||||||||||..|||||||.||.||.|||
Sbjct 1175 TGACCTCGTTTGAGCCTGAAGCACTGGGCAACCTGGTTGAAGGGATGGACTTCCACAGATTCTACTTCGAGAAC 1248
Query 1205 CTG-TGGTCCCGGAACAGCAAGCCCGTGCACACCACCATCCTGAATCCCCACATCCACCTGATGGGCGACGAGT 1277
||| ||| ||..||||||||||||..|.|||||.|||||||||||.||.|||.|.|||.|.||.||.||.||..
Sbjct 1249 CTGCTGG-CCAAGAACAGCAAGCCGATCCACACGACCATCCTGAACCCACACGTGCACGTCATTGGAGAGGATG 1321
Query 1278 CAGCCTGCATCGCCTACATCCGCATCACGCAGTACCTGGACGCTGGC--GGCATCCCACGCACCGCCCAGTCGG 1349
|.|||||||||||.||||||||..|||||||||||.|.|||| ||| |||...||.||||||..||||||.|
Sbjct 1322 CCGCCTGCATCGCTTACATCCGGCTCACGCAGTACATTGACG--GGCAGGGCCGGCCCCGCACCAGCCAGTCTG 1393
Query 1350 AGGAGACCCGTGTCTGGCACCGCCGGGACGGCAAATGGCAGATCGTCCACTTCCACAGATCTGGGGCGC-CCTC 1422
||||||||||.||.|||||||||||.||||||||.|||||||.|||.|||||||||.| ||.|||||| |||.
Sbjct 1394 AGGAGACCCGCGTGTGGCACCGCCGCGACGGCAAGTGGCAGAACGTGCACTTCCACTG--CTCGGGCGCGCCTG 1465
Query 1423 CGTCCTGCCCCAC----- 1435
.| |||||.|
Sbjct 1466 TG----GCCCCGCTGCAG 1479